FFCP PHASE1:Hg19::chr12:117157639..117157642,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79794 | |EntrezGene=79794 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26128 | |HGNC=26128 | ||
|TSSclassifier=strong | |||
|UniProt=F8VVN2 | |UniProt=F8VVN2 | ||
|association_with_transcript=289bp_to_ENST00000548356_5end | |association_with_transcript=289bp_to_ENST00000548356_5end | ||
|cluster_id=chr12:117157639..117157642,- | |||
|coexpression_cluster_id=C39 | |||
|description=CAGE_peak_4_at_C12orf49_5end | |description=CAGE_peak_4_at_C12orf49_5end | ||
|id=chr12:117157639..117157642,- | |id=chr12:117157639..117157642,- | ||
|ontology_enrichment_celltype=CL:0002566!5.28e-09!1 | |ontology_enrichment_celltype=CL:0002566!5.28e-09!1 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007297;2.74e-50;2!UBERON:0003918;3.02e-11;10!UBERON:0007687;3.02e-11;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p4@C12orf49 | |short_description=p4@C12orf49 | ||
}} | }} |
Latest revision as of 15:58, 16 September 2015
Short description: | p4@C12orf49 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_C12orf49_5end |
Coexpression cluster: | C39_epididymis_ductus_seminal_testis_acute_thyroid_CD133 |
Association with transcript: | 289bp_to_ENST00000548356_5end |
EntrezGene: | C12orf49 |
HGNC: | 26128 |
UniProt: | F8VVN2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epididymis | 9.37e-99 | 1 |
male genital duct | 4.27e-34 | 3 |
internal male genitalia | 4.27e-34 | 3 |
duct of male reproductive system | 5.56e-26 | 4 |
kidney | 1.86e-16 | 26 |
kidney mesenchyme | 1.86e-16 | 26 |
upper urinary tract | 1.86e-16 | 26 |
kidney rudiment | 1.86e-16 | 26 |
kidney field | 1.86e-16 | 26 |
cavitated compound organ | 5.04e-14 | 31 |
mesonephric epithelium | 9.39e-14 | 8 |
mesonephric tubule | 9.39e-14 | 8 |
nephric duct | 9.39e-14 | 8 |
renal duct | 9.39e-14 | 8 |
mesonephric duct | 9.39e-14 | 8 |
pronephric duct | 9.39e-14 | 8 |
mesonephros | 2.19e-12 | 9 |
pronephros | 2.19e-12 | 9 |
nephrogenic cord | 2.19e-12 | 9 |
pronephric mesoderm | 2.19e-12 | 9 |
rostral part of nephrogenic cord | 2.19e-12 | 9 |
presumptive pronephric mesoderm | 2.19e-12 | 9 |
male reproductive organ | 2.16e-10 | 11 |
urogenital ridge | 2.16e-10 | 11 |
urinary system structure | 1.08e-09 | 47 |
intraembryonic coelom | 1.22e-09 | 12 |
renal system | 1.62e-09 | 48 |
abdomen element | 1.34e-08 | 54 |
abdominal segment element | 1.34e-08 | 54 |
abdominal segment of trunk | 7.34e-08 | 60 |
abdomen | 7.34e-08 | 60 |
excretory tube | 1.45e-07 | 16 |
kidney epithelium | 1.45e-07 | 16 |
compound organ | 4.47e-07 | 68 |