FFCP PHASE1:Hg19::chr13:114145160..114145184,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55002 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20329 | |||
|TSSclassifier=strong | |||
|UniProt=Q6UWJ1 | |||
|association_with_transcript=-123bp_to_NM_017905,uc001vtt.3,uc001vtu.3_5end | |||
|cluster_id=chr13:114145160..114145184,+ | |||
|description=CAGE_peak_2_at_TMCO3_5end | |||
|id=chr13:114145160..114145184,+ | |||
|ontology_enrichment_celltype=CL:0000791!1.45e-10!18;CL:0000789!1.45e-10!18;CL:0002420!1.45e-10!18;CL:0002419!1.45e-10!18;CL:0000790!1.45e-10!18;CL:0000838!3.17e-10!52;CL:0000542!5.51e-10!53;CL:0000051!5.51e-10!53;CL:0000084!4.87e-09!25;CL:0000827!4.87e-09!25;CL:0000625!4.96e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000791;3.08e-11;18!CL:0000789;3.08e-11;18!CL:0002419;3.08e-11;18!CL:0000084;6.92e-10;25!CL:0000625;1.09e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.88e-11,18;CL:0000789,1.88e-11,18;CL:0002420,1.88e-11,18;CL:0002419,1.88e-11,18;CL:0000790,1.88e-11,18;CL:0000838,2.75e-10,52;CL:0000084,5.81e-10,25;CL:0000827,5.81e-10,25;CL:0000542,9.41e-10,53;CL:0000051,9.41e-10,53;CL:0000625,1.43e-07,11;CL:0000037,4.52e-07,168;CL:0000988,8.68e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000790;3.08e-11;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001950!2.28e-07!20;UBERON:0002619!3.68e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;2.95e-08;20!UBERON:0002619;4.20e-08;22!UBERON:0000956;2.74e-07;25!UBERON:0000203;2.74e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,2.84e-08,20;UBERON:0002619,5.02e-08,22;UBERON:0000956,7.18e-07,25;UBERON:0000203,7.18e-07,25 | |||
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| |||
|short_description=p2@TMCO3 | |||
}} |
Latest revision as of 16:12, 16 September 2015
Short description: | p2@TMCO3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TMCO3_5end |
Coexpression cluster: | NA |
Association with transcript: | -123bp_to_NM_017905, uc001vtt.3, uc001vtu.3_5end |
EntrezGene: | TMCO3 |
HGNC: | 20329 |
UniProt: | Q6UWJ1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.88e-11 | 18 |
alpha-beta T cell | 1.88e-11 | 18 |
immature T cell | 1.88e-11 | 18 |
mature T cell | 1.88e-11 | 18 |
immature alpha-beta T cell | 1.88e-11 | 18 |
lymphoid lineage restricted progenitor cell | 2.75e-10 | 52 |
T cell | 5.81e-10 | 25 |
pro-T cell | 5.81e-10 | 25 |
lymphocyte | 9.41e-10 | 53 |
common lymphoid progenitor | 9.41e-10 | 53 |
CD8-positive, alpha-beta T cell | 1.43e-07 | 11 |
hematopoietic stem cell | 4.52e-07 | 168 |
hematopoietic cell | 8.68e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
neocortex | 2.84e-08 | 20 |
regional part of cerebral cortex | 5.02e-08 | 22 |
cerebral cortex | 7.18e-07 | 25 |
pallium | 7.18e-07 | 25 |