FFCP PHASE1:Hg19::chr13:114145441..114145461,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55002 | |EntrezGene=55002 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20329 | |HGNC=20329 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=30bp_to_ENST00000474393_5end | |association_with_transcript=30bp_to_ENST00000474393_5end | ||
|cluster_id=chr13:114145441..114145461,+ | |||
|description=CAGE_peak_3_at_TMCO3_5end | |description=CAGE_peak_3_at_TMCO3_5end | ||
|id=chr13:114145441..114145461,+ | |id=chr13:114145441..114145461,+ | ||
|ontology_enrichment_celltype=CL:0000055!2.71e-27!180;CL:0000548!1.18e-24!679;CL:0000004!1.18e-24!679;CL:0000255!1.18e-24!679;CL:0000012!1.01e-23!682;CL:0000144!1.49e-21!625;CL:0002371!1.09e-20!591;CL:0000057!1.03e-18!75;CL:0000220!2.02e-18!246;CL:0000222!3.16e-18!119;CL:0002321!1.03e-17!248;CL:0000003!7.76e-12!722;CL:0000183!8.55e-12!59;CL:0000680!1.39e-10!57;CL:0000056!1.39e-10!57;CL:0000355!1.39e-10!57;CL:0000187!4.43e-10!54;CL:0000192!6.50e-10!42;CL:0000514!6.50e-10!42;CL:0000063!5.44e-09!578;CL:0000393!4.44e-08!60;CL:0000211!4.44e-08!60;CL:0000359!7.14e-08!32;CL:0000066!7.82e-08!254;CL:0000213!2.37e-07!57;CL:0000215!2.37e-07!57;CL:0002139!8.11e-07!24 | |ontology_enrichment_celltype=CL:0000055!2.71e-27!180;CL:0000548!1.18e-24!679;CL:0000004!1.18e-24!679;CL:0000255!1.18e-24!679;CL:0000012!1.01e-23!682;CL:0000144!1.49e-21!625;CL:0002371!1.09e-20!591;CL:0000057!1.03e-18!75;CL:0000220!2.02e-18!246;CL:0000222!3.16e-18!119;CL:0002321!1.03e-17!248;CL:0000003!7.76e-12!722;CL:0000183!8.55e-12!59;CL:0000680!1.39e-10!57;CL:0000056!1.39e-10!57;CL:0000355!1.39e-10!57;CL:0000187!4.43e-10!54;CL:0000192!6.50e-10!42;CL:0000514!6.50e-10!42;CL:0000063!5.44e-09!578;CL:0000393!4.44e-08!60;CL:0000211!4.44e-08!60;CL:0000359!7.14e-08!32;CL:0000066!7.82e-08!254;CL:0000213!2.37e-07!57;CL:0000215!2.37e-07!57;CL:0002139!8.11e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0000057;1.06e-08;73!CL:0000192;1.57e-08;43!CL:0000359;4.03e-08;32!CL:0002320;2.22e-07;188!CL:0002139;2.62e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.31e-21,76;CL:0000222,5.14e-20,121;CL:0002321,5.36e-15,250;CL:0000680,7.79e-12,58;CL:0000056,7.79e-12,58;CL:0000355,7.79e-12,58;CL:0000192,2.70e-11,43;CL:0000514,2.70e-11,43;CL:0000187,2.96e-11,55;CL:0000048,3.17e-09,427;CL:0000723,1.15e-08,433;CL:0000359,1.51e-08,32;CL:0000393,1.62e-08,61;CL:0000211,1.62e-08,61;CL:0000213,1.06e-07,58;CL:0000215,1.06e-07,58;CL:0000034,1.14e-07,441;CL:0002139,1.31e-07,24 | |||
|ontology_enrichment_development_v019=CL:0000514;1.57e-08;43!CL:0000355;5.80e-07;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!9.92e-17!79;UBERON:0007798!9.92e-17!79;UBERON:0002100!1.24e-15!216;UBERON:0000914!5.65e-15!83;UBERON:0002329!5.65e-15!83;UBERON:0003077!5.65e-15!83;UBERON:0003059!5.65e-15!83;UBERON:0007282!5.65e-15!83;UBERON:0009618!5.65e-15!83;UBERON:0007285!5.65e-15!83;UBERON:0005256!1.80e-14!143;UBERON:0000926!1.85e-14!448;UBERON:0004120!1.85e-14!448;UBERON:0006603!1.85e-14!448;UBERON:0000055!3.43e-14!69;UBERON:0004872!3.64e-14!84;UBERON:0003914!8.32e-14!118;UBERON:0000490!3.49e-13!138;UBERON:0001981!6.96e-13!60;UBERON:0007500!6.96e-13!60;UBERON:0004537!6.96e-13!60;UBERON:0006965!6.96e-13!60;UBERON:0000468!1.19e-12!659;UBERON:0000486!2.64e-12!82;UBERON:0004290!6.60e-12!70;UBERON:0000467!1.43e-11!625;UBERON:0000480!1.97e-11!626;UBERON:0004535!6.10e-11!110;UBERON:0003104!8.29e-11!238;UBERON:0009142!8.29e-11!238;UBERON:0001637!2.49e-10!42;UBERON:0003509!2.49e-10!42;UBERON:0004572!2.49e-10!42;UBERON:0001134!3.84e-10!61;UBERON:0002036!3.84e-10!61;UBERON:0003082!3.84e-10!61;UBERON:0001009!4.01e-10!113;UBERON:0002385!1.26e-09!63;UBERON:0001015!1.26e-09!63;UBERON:0000383!1.26e-09!63;UBERON:0000475!4.51e-09!365;UBERON:0004573!6.29e-09!33;UBERON:0004571!6.29e-09!33;UBERON:0003102!2.58e-08!95;UBERON:0004923!8.87e-08!57;UBERON:0006914!3.86e-07!25;UBERON:0002050!6.89e-07!605;UBERON:0005423!6.89e-07!605;UBERON:0000119!7.60e-07!312;UBERON:0000923!7.71e-07!604;UBERON:0005291!7.71e-07!604;UBERON:0006598!7.71e-07!604;UBERON:0002532!7.71e-07!604;UBERON:0000481!9.64e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.03e-08;33!UBERON:0004571;1.03e-08;33!UBERON:0000055;1.62e-08;65!UBERON:0001637;1.71e-08;42!UBERON:0003509;1.71e-08;42!UBERON:0004572;1.71e-08;42!UBERON:0007500;2.55e-08;56!UBERON:0001981;2.55e-08;56!UBERON:0004537;2.55e-08;56!UBERON:0002049;8.48e-08;75!UBERON:0007798;8.48e-08;75!UBERON:0003914;1.82e-07;74!UBERON:0001434;1.86e-07;36!UBERON:0006914;1.90e-07;25!UBERON:0000487;8.32e-07;22!UBERON:0004765;9.99e-07;26 | |||
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| ||
|short_description=p3@TMCO3 | |short_description=p3@TMCO3 | ||
}} | }} |
Latest revision as of 16:15, 16 September 2015
Short description: | p3@TMCO3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TMCO3_5end |
Coexpression cluster: | NA |
Association with transcript: | 30bp_to_ENST00000474393_5end |
EntrezGene: | TMCO3 |
HGNC: | 20329 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.31e-21 | 76 |
mesodermal cell | 5.14e-20 | 121 |
embryonic cell | 5.36e-15 | 250 |
muscle precursor cell | 7.79e-12 | 58 |
myoblast | 7.79e-12 | 58 |
multi-potent skeletal muscle stem cell | 7.79e-12 | 58 |
smooth muscle cell | 2.70e-11 | 43 |
smooth muscle myoblast | 2.70e-11 | 43 |
muscle cell | 2.96e-11 | 55 |
multi fate stem cell | 3.17e-09 | 427 |
somatic stem cell | 1.15e-08 | 433 |
vascular associated smooth muscle cell | 1.51e-08 | 32 |
electrically responsive cell | 1.62e-08 | 61 |
electrically active cell | 1.62e-08 | 61 |
lining cell | 1.06e-07 | 58 |
barrier cell | 1.06e-07 | 58 |
stem cell | 1.14e-07 | 441 |
endothelial cell of vascular tree | 1.31e-07 | 24 |