FFCP PHASE1:Hg19::chr19:1863568..1863586,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=83855 | |EntrezGene=83855 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16857 | |HGNC=16857 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BXK1 | |UniProt=Q9BXK1 | ||
|association_with_transcript=-4bp_to_ENST00000250916,NM_031918,uc002luc.2,uc010xgt.1_5end | |association_with_transcript=-4bp_to_ENST00000250916,NM_031918,uc002luc.2,uc010xgt.1_5end | ||
|cluster_id=chr19:1863568..1863586,- | |||
|description=CAGE_peak_1_at_KLF16_5end | |description=CAGE_peak_1_at_KLF16_5end | ||
|id=chr19:1863568..1863586,- | |id=chr19:1863568..1863586,- | ||
|ontology_enrichment_celltype=CL:0000012!1.65e-29!682;CL:0000548!1.19e-28!679;CL:0000004!1.19e-28!679;CL:0000255!1.19e-28!679;CL:0000144!6.07e-26!625;CL:0002371!5.90e-24!591;CL:0000003!4.54e-23!722;CL:0002321!4.93e-23!248;CL:0000220!5.14e-23!246;CL:0000063!2.07e-16!578;CL:0000066!2.69e-16!254;CL:0000222!1.25e-13!119;CL:0002078!4.87e-09!44;CL:0000115!5.70e-09!35;CL:0000076!5.76e-09!62;CL:0000213!2.96e-08!57;CL:0000215!2.96e-08!57;CL:0000359!1.93e-07!32;CL:0000183!7.43e-07!59 | |ontology_enrichment_celltype=CL:0000012!1.65e-29!682;CL:0000548!1.19e-28!679;CL:0000004!1.19e-28!679;CL:0000255!1.19e-28!679;CL:0000144!6.07e-26!625;CL:0002371!5.90e-24!591;CL:0000003!4.54e-23!722;CL:0002321!4.93e-23!248;CL:0000220!5.14e-23!246;CL:0000063!2.07e-16!578;CL:0000066!2.69e-16!254;CL:0000222!1.25e-13!119;CL:0002078!4.87e-09!44;CL:0000115!5.70e-09!35;CL:0000076!5.76e-09!62;CL:0000213!2.96e-08!57;CL:0000215!2.96e-08!57;CL:0000359!1.93e-07!32;CL:0000183!7.43e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000115;3.65e-08;36!CL:1000449;1.64e-07;15!CL:0000359;3.41e-07;32 | |ontology_enrichment_celltype_v019=CL:0000115;3.65e-08;36!CL:1000449;1.64e-07;15!CL:0000359;3.41e-07;32 | ||
|ontology_enrichment_celltype_v019_2=CL:0002321,6.18e-23,250;CL:0000066,1.26e-16,253;CL:0000222,1.81e-13,121;CL:0002078,2.53e-09,45;CL:0000115,2.90e-09,36;CL:0000076,1.20e-08,63;CL:0000213,1.61e-08,58;CL:0000215,1.61e-08,58;CL:1000449,1.58e-07,15;CL:0000359,1.93e-07,32 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001637!8.29e-11!42;UBERON:0003509!8.29e-11!42;UBERON:0004572!8.29e-11!42;UBERON:0000055!1.86e-10!69;UBERON:0001981!5.69e-10!60;UBERON:0007500!5.69e-10!60;UBERON:0004537!5.69e-10!60;UBERON:0006965!5.69e-10!60;UBERON:0002049!9.66e-10!79;UBERON:0007798!9.66e-10!79;UBERON:0003914!1.56e-09!118;UBERON:0000486!1.14e-07!82;UBERON:0004573!2.63e-07!33;UBERON:0004571!2.63e-07!33;UBERON:0004535!3.33e-07!110;UBERON:0004872!3.40e-07!84;UBERON:0000487!7.89e-07!22 | |ontology_enrichment_uberon=UBERON:0001637!8.29e-11!42;UBERON:0003509!8.29e-11!42;UBERON:0004572!8.29e-11!42;UBERON:0000055!1.86e-10!69;UBERON:0001981!5.69e-10!60;UBERON:0007500!5.69e-10!60;UBERON:0004537!5.69e-10!60;UBERON:0006965!5.69e-10!60;UBERON:0002049!9.66e-10!79;UBERON:0007798!9.66e-10!79;UBERON:0003914!1.56e-09!118;UBERON:0000486!1.14e-07!82;UBERON:0004573!2.63e-07!33;UBERON:0004571!2.63e-07!33;UBERON:0004535!3.33e-07!110;UBERON:0004872!3.40e-07!84;UBERON:0000487!7.89e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0003914;3.01e-09;74!UBERON:0001637;4.08e-08;42!UBERON:0003509;4.08e-08;42!UBERON:0004572;4.08e-08;42!UBERON:0006555;1.64e-07;15!UBERON:0004819;1.64e-07;15!UBERON:0001285;1.64e-07;15!UBERON:0007684;1.64e-07;15!UBERON:0007500;2.15e-07;56!UBERON:0001981;2.15e-07;56!UBERON:0004537;2.15e-07;56!UBERON:0000353;7.43e-07;15!UBERON:0000487;7.72e-07;22!UBERON:0004573;9.12e-07;33!UBERON:0004571;9.12e-07;33 | |ontology_enrichment_uberon_v019=UBERON:0003914;3.01e-09;74!UBERON:0001637;4.08e-08;42!UBERON:0003509;4.08e-08;42!UBERON:0004572;4.08e-08;42!UBERON:0006555;1.64e-07;15!UBERON:0004819;1.64e-07;15!UBERON:0001285;1.64e-07;15!UBERON:0007684;1.64e-07;15!UBERON:0007500;2.15e-07;56!UBERON:0001981;2.15e-07;56!UBERON:0004537;2.15e-07;56!UBERON:0000353;7.43e-07;15!UBERON:0000487;7.72e-07;22!UBERON:0004573;9.12e-07;33!UBERON:0004571;9.12e-07;33 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,8.29e-11,42;UBERON:0003509,8.29e-11,42;UBERON:0004572,8.29e-11,42;UBERON:0000055,1.68e-10,68;UBERON:0007500,5.03e-10,59;UBERON:0001981,5.03e-10,59;UBERON:0004537,5.03e-10,59;UBERON:0006965,5.03e-10,59;UBERON:0003914,6.94e-10,117;UBERON:0002049,9.07e-10,78;UBERON:0007798,9.07e-10,78;UBERON:0007503,1.47e-07,78;UBERON:0004211,1.58e-07,15;UBERON:0009773,1.58e-07,15;UBERON:0001231,1.58e-07,15;UBERON:0001285,1.58e-07,15;UBERON:0007684,1.58e-07,15;UBERON:0004208,1.58e-07,15;UBERON:0000486,2.59e-07,83;UBERON:0004573,2.63e-07,33;UBERON:0004571,2.63e-07,33;UBERON:0004872,3.35e-07,83;UBERON:0004535,3.36e-07,109;UBERON:0000353,7.19e-07,15;UBERON:0000487,7.89e-07,22 | |||
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| ||
|short_description=p1@KLF16 | |short_description=p1@KLF16 | ||
}} | }} |
Latest revision as of 16:31, 16 September 2015
Short description: | p1@KLF16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KLF16_5end |
Coexpression cluster: | NA |
Association with transcript: | -4bp_to_ENST00000250916, NM_031918, uc002luc.2, uc010xgt.1_5end |
EntrezGene: | KLF16 |
HGNC: | 16857 |
UniProt: | Q9BXK1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 6.18e-23 | 250 |
epithelial cell | 1.26e-16 | 253 |
mesodermal cell | 1.81e-13 | 121 |
meso-epithelial cell | 2.53e-09 | 45 |
endothelial cell | 2.90e-09 | 36 |
squamous epithelial cell | 1.20e-08 | 63 |
lining cell | 1.61e-08 | 58 |
barrier cell | 1.61e-08 | 58 |
epithelial cell of nephron | 1.58e-07 | 15 |
vascular associated smooth muscle cell | 1.93e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
artery | 8.29e-11 | 42 |
arterial blood vessel | 8.29e-11 | 42 |
arterial system | 8.29e-11 | 42 |
vessel | 1.68e-10 | 68 |
epithelial tube open at both ends | 5.03e-10 | 59 |
blood vessel | 5.03e-10 | 59 |
blood vasculature | 5.03e-10 | 59 |
vascular cord | 5.03e-10 | 59 |
epithelial tube | 6.94e-10 | 117 |
vasculature | 9.07e-10 | 78 |
vascular system | 9.07e-10 | 78 |
epithelial vesicle | 1.47e-07 | 78 |
nephron epithelium | 1.58e-07 | 15 |
renal tubule | 1.58e-07 | 15 |
nephron tubule | 1.58e-07 | 15 |
nephron | 1.58e-07 | 15 |
uriniferous tubule | 1.58e-07 | 15 |
nephrogenic mesenchyme | 1.58e-07 | 15 |
multilaminar epithelium | 2.59e-07 | 83 |
systemic artery | 2.63e-07 | 33 |
systemic arterial system | 2.63e-07 | 33 |
splanchnic layer of lateral plate mesoderm | 3.35e-07 | 83 |
cardiovascular system | 3.36e-07 | 109 |
parenchyma | 7.19e-07 | 15 |
simple squamous epithelium | 7.89e-07 | 22 |