FFCP PHASE1:Hg19::chr16:447267..447272,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4833 | |EntrezGene=4833 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7852 | |HGNC=7852 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=59bp_to_ENST00000460297_5end | |association_with_transcript=59bp_to_ENST00000460297_5end | ||
|cluster_id=chr16:447267..447272,+ | |||
|coexpression_cluster_id=C2373 | |||
|description=CAGE_peak_6_at_NME4_5end | |description=CAGE_peak_6_at_NME4_5end | ||
|id=chr16:447267..447272,+ | |id=chr16:447267..447272,+ | ||
|ontology_enrichment_celltype=CL:0000055!3.52e-26!180;CL:0000222!5.06e-21!119;CL:0000183!6.71e-19!59;CL:0000680!1.41e-17!57;CL:0000056!1.41e-17!57;CL:0000355!1.41e-17!57;CL:0000187!5.13e-17!54;CL:0000192!6.26e-16!42;CL:0000514!6.26e-16!42;CL:0000220!1.84e-15!246;CL:0000393!2.98e-15!60;CL:0000211!2.98e-15!60;CL:0002321!6.11e-15!248;CL:0000359!3.15e-13!32;CL:0000144!3.97e-10!625;CL:0000057!8.19e-10!75;CL:0002371!1.58e-09!591 | |ontology_enrichment_celltype=CL:0000055!3.52e-26!180;CL:0000222!5.06e-21!119;CL:0000183!6.71e-19!59;CL:0000680!1.41e-17!57;CL:0000056!1.41e-17!57;CL:0000355!1.41e-17!57;CL:0000187!5.13e-17!54;CL:0000192!6.26e-16!42;CL:0000514!6.26e-16!42;CL:0000220!1.84e-15!246;CL:0000393!2.98e-15!60;CL:0000211!2.98e-15!60;CL:0002321!6.11e-15!248;CL:0000359!3.15e-13!32;CL:0000144!3.97e-10!625;CL:0000057!8.19e-10!75;CL:0002371!1.58e-09!591 | ||
|ontology_enrichment_celltype_v019=CL:0000359;1.11e-13;32!CL:0000192;1.01e-12;43!CL:0000187;1.79e-10;55!CL:0000393;4.07e-08;61!CL:0000211;4.07e-08;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.22e-21,121;CL:0000680,3.50e-19,58;CL:0000056,3.50e-19,58;CL:0000355,3.50e-19,58;CL:0000187,1.46e-18,55;CL:0000192,4.77e-17,43;CL:0000514,4.77e-17,43;CL:0000393,4.94e-16,61;CL:0000211,4.94e-16,61;CL:0000359,2.33e-14,32;CL:0002321,1.46e-13,250;CL:0000057,1.07e-09,76;CL:0000048,3.22e-09,427;CL:0000723,5.20e-09,433;CL:0000034,7.45e-08,441 | |||
|ontology_enrichment_development_v019=CL:0000514;1.01e-12;43!CL:0000355;3.54e-10;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!8.73e-20!143;UBERON:0004290!7.59e-17!70;UBERON:0002385!1.08e-16!63;UBERON:0001015!1.08e-16!63;UBERON:0000383!1.08e-16!63;UBERON:0000914!1.29e-16!83;UBERON:0002329!1.29e-16!83;UBERON:0003077!1.29e-16!83;UBERON:0003059!1.29e-16!83;UBERON:0007282!1.29e-16!83;UBERON:0009618!1.29e-16!83;UBERON:0007285!1.29e-16!83;UBERON:0001134!1.71e-16!61;UBERON:0002036!1.71e-16!61;UBERON:0003082!1.71e-16!61;UBERON:0003914!1.25e-15!118;UBERON:0002049!3.03e-15!79;UBERON:0007798!3.03e-15!79;UBERON:0002100!1.23e-14!216;UBERON:0004872!1.39e-14!84;UBERON:0000486!1.64e-14!82;UBERON:0000490!2.66e-14!138;UBERON:0001981!5.47e-13!60;UBERON:0007500!5.47e-13!60;UBERON:0004537!5.47e-13!60;UBERON:0006965!5.47e-13!60;UBERON:0001637!2.97e-12!42;UBERON:0003509!2.97e-12!42;UBERON:0004572!2.97e-12!42;UBERON:0000055!3.08e-12!69;UBERON:0004535!4.35e-12!110;UBERON:0001009!5.21e-12!113;UBERON:0003104!3.81e-09!238;UBERON:0009142!3.81e-09!238;UBERON:0004573!4.06e-09!33;UBERON:0004571!4.06e-09!33;UBERON:0000475!2.11e-08!365;UBERON:0000119!2.19e-07!312;UBERON:0000483!3.61e-07!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;5.24e-09;42!UBERON:0003509;5.24e-09;42!UBERON:0004572;5.24e-09;42!UBERON:0004573;7.58e-09;33!UBERON:0004571;7.58e-09;33!UBERON:0007500;9.05e-08;56!UBERON:0001981;9.05e-08;56!UBERON:0004537;9.05e-08;56!UBERON:0002049;3.15e-07;75!UBERON:0007798;3.15e-07;75!UBERON:0002385;5.33e-07;31!UBERON:0001015;5.33e-07;31!UBERON:0000383;5.33e-07;31 | |||
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| ||
|short_description=p6@NME4 | |short_description=p6@NME4 | ||
}} | }} |
Latest revision as of 16:34, 16 September 2015
Short description: | p6@NME4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_NME4_5end |
Coexpression cluster: | C2373_Mesenchymal_Renal_leiomyoblastoma_Hepatic_Pericytes_Fibroblast_Smooth |
Association with transcript: | 59bp_to_ENST00000460297_5end |
EntrezGene: | NME4 |
HGNC: | 7852 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.22e-21 | 121 |
muscle precursor cell | 3.50e-19 | 58 |
myoblast | 3.50e-19 | 58 |
multi-potent skeletal muscle stem cell | 3.50e-19 | 58 |
muscle cell | 1.46e-18 | 55 |
smooth muscle cell | 4.77e-17 | 43 |
smooth muscle myoblast | 4.77e-17 | 43 |
electrically responsive cell | 4.94e-16 | 61 |
electrically active cell | 4.94e-16 | 61 |
vascular associated smooth muscle cell | 2.33e-14 | 32 |
embryonic cell | 1.46e-13 | 250 |
fibroblast | 1.07e-09 | 76 |
multi fate stem cell | 3.22e-09 | 427 |
somatic stem cell | 5.20e-09 | 433 |
stem cell | 7.45e-08 | 441 |