FFCP PHASE1:Hg19::chr4:169575836..169575859,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23022 | |EntrezGene=23022 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17068 | |HGNC=17068 | ||
|TSSclassifier=strong | |||
|UniProt=D6RBB1 | |UniProt=D6RBB1 | ||
|association_with_transcript=-23bp_to_ENST00000503457_5end | |association_with_transcript=-23bp_to_ENST00000503457_5end | ||
|cluster_id=chr4:169575836..169575859,+ | |||
|coexpression_cluster_id=C4392 | |||
|description=CAGE_peak_24_at_PALLD_5end | |description=CAGE_peak_24_at_PALLD_5end | ||
|id=chr4:169575836..169575859,+ | |id=chr4:169575836..169575859,+ | ||
|ontology_enrichment_celltype=CL:0000066!7.30e-13!254;CL:0002159!4.42e-12!13;CL:0000622!3.92e-11!5;CL:0000362!1.47e-09!8;CL:0002327!1.84e-09!4;CL:0000154!3.46e-09!6;CL:0000240!5.48e-09!6;CL:0000311!5.48e-09!6;CL:0000079!5.48e-09!6;CL:0000237!5.48e-09!6;CL:0000036!5.48e-09!6;CL:0000357!5.48e-09!6;CL:0000114!5.48e-09!6;CL:0002251!3.80e-08!21;CL:0000312!3.26e-07!5;CL:0002623!4.11e-07!3;CL:0002076!4.32e-07!43 | |ontology_enrichment_celltype=CL:0000066!7.30e-13!254;CL:0002159!4.42e-12!13;CL:0000622!3.92e-11!5;CL:0000362!1.47e-09!8;CL:0002327!1.84e-09!4;CL:0000154!3.46e-09!6;CL:0000240!5.48e-09!6;CL:0000311!5.48e-09!6;CL:0000079!5.48e-09!6;CL:0000237!5.48e-09!6;CL:0000036!5.48e-09!6;CL:0000357!5.48e-09!6;CL:0000114!5.48e-09!6;CL:0002251!3.80e-08!21;CL:0000312!3.26e-07!5;CL:0002623!4.11e-07!3;CL:0002076!4.32e-07!43 | ||
|ontology_enrichment_celltype_v019=CL:0002159;1.15e-13;14!CL:0002327;1.72e-13;4!CL:0000317;3.96e-12;2!CL:1000448;3.96e-12;2!CL:0002308;3.96e-12;2!CL:0002140;3.96e-12;2!CL:0000575;1.74e-11;2!CL:0000622;8.99e-11;5!CL:0000362;3.05e-10;9!CL:0000154;4.73e-09;6!CL:0000240;6.21e-09;6!CL:0000311;6.21e-09;6!CL:0000079;6.21e-09;6!CL:0000237;6.21e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002159,1.38e-13,14;CL:0002327,2.12e-13,4;CL:0000317,5.53e-12,2;CL:1000448,5.53e-12,2;CL:0002308,5.53e-12,2;CL:0002140,5.53e-12,2;CL:0000575,2.40e-11,2;CL:0000622,1.06e-10,5;CL:0000362,3.20e-10,9;CL:0000154,5.43e-09,6;CL:0000240,6.92e-09,6;CL:0000311,6.92e-09,6;CL:0000079,6.92e-09,6;CL:0000237,6.92e-09,6;CL:0000036,6.92e-09,6;CL:0000357,6.92e-09,6;CL:0000114,6.92e-09,6;CL:0000076,7.59e-07,63 | |||
|ontology_enrichment_development_v019=CL:0000357;6.21e-09;6!CL:0000114;6.21e-09;6!UBERON:0006298;6.79e-07;1 | |||
|ontology_enrichment_disease=DOID:305!4.36e-12!106;DOID:1749!3.52e-10!14;DOID:0050687!1.68e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001004!1.32e-18!72;UBERON:0000072!2.57e-15!46;UBERON:0001007!4.41e-15!155;UBERON:0001555!4.41e-15!155;UBERON:0007026!4.41e-15!155;UBERON:0001557!6.87e-15!19;UBERON:0004119!1.79e-14!169;UBERON:0000925!1.79e-14!169;UBERON:0006595!1.79e-14!169;UBERON:0000065!1.69e-12!53;UBERON:0004921!1.78e-12!129;UBERON:0004185!1.78e-12!129;UBERON:0001737!2.20e-12!9;UBERON:0000166!6.63e-12!21;UBERON:0008947!9.49e-11!38;UBERON:0003258!9.49e-11!38;UBERON:0001041!1.21e-10!98;UBERON:0003408!3.86e-10!10;UBERON:0000165!8.92e-10!28;UBERON:0000930!8.92e-10!28;UBERON:0001911!1.84e-09!4;UBERON:0005333!1.84e-09!4;UBERON:0008425!1.84e-09!4;UBERON:0005311!1.84e-09!4;UBERON:0001044!3.24e-09!6;UBERON:0003293!3.24e-09!6;UBERON:0003294!3.24e-09!6;UBERON:0010047!3.24e-09!6;UBERON:0000167!3.24e-09!6;UBERON:0000077!8.43e-09!130;UBERON:0000063!4.81e-08!97;UBERON:0000161!4.94e-07!35;UBERON:0001003!8.61e-07!14;UBERON:0007376!8.61e-07!14;UBERON:0007383!8.61e-07!14 | |ontology_enrichment_uberon=UBERON:0001004!1.32e-18!72;UBERON:0000072!2.57e-15!46;UBERON:0001007!4.41e-15!155;UBERON:0001555!4.41e-15!155;UBERON:0007026!4.41e-15!155;UBERON:0001557!6.87e-15!19;UBERON:0004119!1.79e-14!169;UBERON:0000925!1.79e-14!169;UBERON:0006595!1.79e-14!169;UBERON:0000065!1.69e-12!53;UBERON:0004921!1.78e-12!129;UBERON:0004185!1.78e-12!129;UBERON:0001737!2.20e-12!9;UBERON:0000166!6.63e-12!21;UBERON:0008947!9.49e-11!38;UBERON:0003258!9.49e-11!38;UBERON:0001041!1.21e-10!98;UBERON:0003408!3.86e-10!10;UBERON:0000165!8.92e-10!28;UBERON:0000930!8.92e-10!28;UBERON:0001911!1.84e-09!4;UBERON:0005333!1.84e-09!4;UBERON:0008425!1.84e-09!4;UBERON:0005311!1.84e-09!4;UBERON:0001044!3.24e-09!6;UBERON:0003293!3.24e-09!6;UBERON:0003294!3.24e-09!6;UBERON:0010047!3.24e-09!6;UBERON:0000167!3.24e-09!6;UBERON:0000077!8.43e-09!130;UBERON:0000063!4.81e-08!97;UBERON:0000161!4.94e-07!35;UBERON:0001003!8.61e-07!14;UBERON:0007376!8.61e-07!14;UBERON:0007383!8.61e-07!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0001911;1.72e-13;4!UBERON:0002419;3.96e-12;2!UBERON:0007771;3.96e-12;2!UBERON:0003297;3.96e-12;2!UBERON:0001821;3.96e-12;2!UBERON:0003487;3.96e-12;2!UBERON:0001820;3.96e-12;2!UBERON:0006562;5.37e-12;2!UBERON:0002370;8.33e-12;2!UBERON:0005058;8.33e-12;2!UBERON:0009113;8.33e-12;2!UBERON:0002365;4.37e-10;31!UBERON:0002330;4.37e-10;31!UBERON:0004921;2.08e-09;33!UBERON:0001044;4.73e-09;6!UBERON:0003293;4.73e-09;6!UBERON:0003294;4.73e-09;6!UBERON:0010047;4.73e-09;6!UBERON:0003408;4.73e-09;6!UBERON:0000167;4.73e-09;6!UBERON:0000165;1.29e-08;28!UBERON:0005795;3.31e-07;1!UBERON:0000161;5.04e-07;19!UBERON:0000166;5.04e-07;19!UBERON:0000153;5.08e-07;54!UBERON:0001736;6.79e-07;1!UBERON:0001555;8.50e-07;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003408,1.15e-13,10;UBERON:0001911,2.12e-13,4;UBERON:0005333,2.12e-13,4;UBERON:0008425,2.12e-13,4;UBERON:0005311,2.12e-13,4;UBERON:0006562,4.53e-12,11;UBERON:0002419,5.53e-12,2;UBERON:0007771,5.53e-12,2;UBERON:0003297,5.53e-12,2;UBERON:0001821,5.53e-12,2;UBERON:0003487,5.53e-12,2;UBERON:0001820,5.53e-12,2;UBERON:0005089,5.53e-12,2;UBERON:0005088,5.53e-12,2;UBERON:0002365,2.24e-10,31;UBERON:0002330,2.24e-10,31;UBERON:0001044,4.87e-09,6;UBERON:0003293,4.87e-09,6;UBERON:0003294,4.87e-09,6;UBERON:0010047,4.87e-09,6;UBERON:0000167,4.87e-09,6;UBERON:0001042,1.19e-08,10;UBERON:0009145,1.19e-08,10;UBERON:0000166,2.34e-08,22;UBERON:0000153,2.55e-08,62;UBERON:0007811,2.55e-08,62;UBERON:0000165,3.17e-08,29;UBERON:0000930,3.17e-08,29;UBERON:0005085,8.79e-08,31;UBERON:0002530,1.36e-07,59;UBERON:0001444,2.51e-07,49;UBERON:0004921,4.03e-07,118;UBERON:0001007,4.75e-07,145;UBERON:0001555,4.75e-07,145;UBERON:0007026,4.75e-07,145;UBERON:0000076,6.47e-07,8;UBERON:0001736,6.60e-07,1;UBERON:0006298,6.60e-07,1;UBERON:0001004,9.33e-07,74;UBERON:0001154,9.79e-07,1;UBERON:0001153,9.79e-07,1;UBERON:0001045,9.79e-07,1 | |||
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| ||
|short_description=p24@PALLD | |short_description=p24@PALLD | ||
}} | }} |
Latest revision as of 16:50, 16 September 2015
Short description: | p24@PALLD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_24_at_PALLD_5end |
Coexpression cluster: | C4392_Mammary_Burkitt_pharyngeal_Keratinocyte_Sebocyte_Corneal_salivary |
Association with transcript: | -23bp_to_ENST00000503457_5end |
EntrezGene: | PALLD |
HGNC: | 17068 |
UniProt: | D6RBB1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
general ecto-epithelial cell | 1.38e-13 | 14 |
mammary gland epithelial cell | 2.12e-13 | 4 |
sebum secreting cell | 5.53e-12 | 2 |
epithelial cell of sweat gland | 5.53e-12 | 2 |
epithelial cell of skin gland | 5.53e-12 | 2 |
acinar cell of sebaceous gland | 5.53e-12 | 2 |
corneal epithelial cell | 2.40e-11 | 2 |
acinar cell | 1.06e-10 | 5 |
epidermal cell | 3.20e-10 | 9 |
protein secreting cell | 5.43e-09 | 6 |
stratified squamous epithelial cell | 6.92e-09 | 6 |
keratin accumulating cell | 6.92e-09 | 6 |
stratified epithelial cell | 6.92e-09 | 6 |
keratinizing barrier epithelial cell | 6.92e-09 | 6 |
epithelial fate stem cell | 6.92e-09 | 6 |
stratified epithelial stem cell | 6.92e-09 | 6 |
surface ectodermal cell | 6.92e-09 | 6 |
squamous epithelial cell | 7.59e-07 | 63 |