FFCP PHASE1:Hg19::chr1:144994873..144994884,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9659 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15580 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000369349_5end | |||
|cluster_id=chr1:144994873..144994884,- | |||
|coexpression_cluster_id=C31 | |||
|description=CAGE_peak_12_at_PDE4DIP_5end | |||
|id=chr1:144994873..144994884,- | |||
|ontology_enrichment_celltype=CL:0002541!9.82e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0002541;4.40e-14;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,4.40e-14,3 | |||
|ontology_enrichment_development_v019=UBERON:0005062;2.58e-11;4!UBERON:0007284;2.58e-11;4!UBERON:0006603;1.93e-07;65 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;1.19e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.19e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.33e-37!115;UBERON:0001049!1.48e-09!57;UBERON:0005068!1.48e-09!57;UBERON:0006241!1.48e-09!57;UBERON:0007135!1.48e-09!57;UBERON:0003075!8.65e-09!86;UBERON:0007284!8.65e-09!86;UBERON:0004151!2.91e-08!3;UBERON:0003978!3.76e-08!3;UBERON:0009751!3.76e-08!3;UBERON:0000946!3.76e-08!3;UBERON:0002523!3.76e-08!3;UBERON:0005983!3.76e-08!3;UBERON:0002165!3.76e-08!3;UBERON:0002062!3.76e-08!3;UBERON:0007280!3.76e-08!3;UBERON:0002346!3.89e-08!90;UBERON:0001893!9.04e-08!34;UBERON:0000476!9.82e-08!3;UBERON:0000920!9.82e-08!3;UBERON:0001950!1.73e-07!20;UBERON:0001017!2.53e-07!82;UBERON:0003103!3.51e-07!69;UBERON:0002780!4.69e-07!41;UBERON:0001890!4.69e-07!41;UBERON:0006240!4.69e-07!41;UBERON:0002616!4.79e-07!59;UBERON:0002791!7.15e-07!33;UBERON:0003080!8.12e-07!42;UBERON:0005743!9.44e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0004151;3.76e-15;3!UBERON:0003978;6.31e-15;3!UBERON:0000946;6.31e-15;3!UBERON:0003124;4.40e-14;3!UBERON:0000920;4.40e-14;3!UBERON:0007100;5.01e-14;25!UBERON:0005090;4.35e-11;2!UBERON:0001630;4.35e-11;2!UBERON:0000341;9.41e-11;2!UBERON:0002081;1.44e-10;2!UBERON:0002133;1.92e-10;2!UBERON:0003127;5.70e-10;2!UBERON:0001829;6.11e-10;2!UBERON:0001723;1.22e-07;3!UBERON:0001033;1.22e-07;3!UBERON:0001134;2.56e-07;16!UBERON:0002036;2.56e-07;16!UBERON:0005631;2.64e-07;10!UBERON:0000158;2.64e-07;10!UBERON:0000948;2.76e-07;22!UBERON:0001044;3.73e-07;6!UBERON:0003293;3.73e-07;6!UBERON:0003294;3.73e-07;6!UBERON:0010047;3.73e-07;6!UBERON:0003408;3.73e-07;6!UBERON:0000167;3.73e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.79e-18,114;UBERON:0004151,3.76e-15,3;UBERON:0003978,6.31e-15,3;UBERON:0009751,6.31e-15,3;UBERON:0000946,6.31e-15,3;UBERON:0002523,6.31e-15,3;UBERON:0005983,6.31e-15,3;UBERON:0002165,6.31e-15,3;UBERON:0002062,6.31e-15,3;UBERON:0007280,6.31e-15,3;UBERON:0000920,4.40e-14,3;UBERON:0007100,7.26e-13,27;UBERON:0005090,4.35e-11,2;UBERON:0001630,4.35e-11,2;UBERON:0000341,9.41e-11,2;UBERON:0003103,1.30e-10,68;UBERON:0002081,1.44e-10,2;UBERON:0010227,1.44e-10,2;UBERON:0002133,1.92e-10,2;UBERON:0003124,2.05e-10,7;UBERON:0003127,6.11e-10,2;UBERON:0001829,6.40e-10,2;UBERON:0005631,9.72e-08,14;UBERON:0000158,9.72e-08,14;UBERON:0001723,1.22e-07,3;UBERON:0001033,1.22e-07,3;UBERON:0010056,1.22e-07,3;UBERON:0001044,3.85e-07,6;UBERON:0003293,3.85e-07,6;UBERON:0003294,3.85e-07,6;UBERON:0010047,3.85e-07,6;UBERON:0000167,3.85e-07,6;UBERON:0000166,5.61e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434343920002738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686286847621712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13345112812495,0,0,0,0,0,0.193341436584244,0,0.614014698904518,0.827019434907183,0,0,0.255679882248303,1.95870478422822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.847294206991012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.50634477090067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.00683535014765,0,0,0,2.14870036263921,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0.463840490809256,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0.295547618953547,0.219385397153973,0,0,0,0,0.922255617552241,2.78248697670294,4.88913173649036,5.42301971544263,1.37396390102793,14.3919389525031,0,0,0,0.451191321234361,0.19606253431774,0,0.189753732724185,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0.134802265961354,169.343883580044,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0.173559738335131,0,0,5.76598005198699,0,0,0,0,2.90967049465258,0,8.13530666809917,0,0,0.253243183823515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,30.721064139948,56.1443038828625,17.9468256144203,29.7521710743497,71.2515239906708,72.9770665834923,39.3023314047349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.104909176269996,0,0,0,70.04014198459,83.4235882660444,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0.314408610199332,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0.250381861413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0.41023272848151,0,0.138314504928436,0,0,0,0,0,0,0,0,0,0,0,0,3.66669372273991,0,0,0.202612753855184,0,0.206686796501184,0.253663240775627,0,2.19303106742873,48.6286954821508,0,0,0,0,0.606965604236632,0,2.83847584520444,0,0,0.135939465953663,0.328863867814245,0,0,0.313972371402056,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29068207646083,0,0,0,0.22910686854405,0,0,0,0,0,139.844628832585,134.385614174827,62.6299792922628,24.285549652957,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0.8453114551668,0,0,0,0,0,0,0,0,6.88093925106811,0.286679166302903,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.454672189309436,0,0,0,111.947840498015,31.6625693846775,0,0.124149428591716,0.224263725161227,1.65482611523229,8.48892193624521,129.541464998692,188.57054889799,3.30025059771479,1.14755528628282,25.614847454043,0,0,0,0,11.7320471201727,0,0,0,3.01910690386539,0 | |||
|short_description=p12@PDE4DIP | |||
}} |
Latest revision as of 16:52, 16 September 2015
Short description: | p12@PDE4DIP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_PDE4DIP_5end |
Coexpression cluster: | C31_skeletal_tongue_diaphragm_throat_penis_skin_trachea |
Association with transcript: | 0bp_to_ENST00000369349_5end |
EntrezGene: | PDE4DIP |
HGNC: | 15580 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 4.40e-14 | 3 |
Ontology term | p-value | n |
---|---|---|
adult organism | 7.79e-18 | 114 |
cardiac chamber | 3.76e-15 | 3 |
valve | 6.31e-15 | 3 |
cardiac mesenchyme | 6.31e-15 | 3 |
cardial valve | 6.31e-15 | 3 |
tunica intima | 6.31e-15 | 3 |
heart layer | 6.31e-15 | 3 |
endocardium | 6.31e-15 | 3 |
endocardial cushion | 6.31e-15 | 3 |
presumptive endocardium | 6.31e-15 | 3 |
egg chorion | 4.40e-14 | 3 |
primary circulatory organ | 7.26e-13 | 27 |
muscle structure | 4.35e-11 | 2 |
muscle organ | 4.35e-11 | 2 |
throat | 9.41e-11 | 2 |
compound organ | 1.30e-10 | 68 |
cardiac atrium | 1.44e-10 | 2 |
future cardiac atrium | 1.44e-10 | 2 |
atrioventricular valve | 1.92e-10 | 2 |
chorion | 2.05e-10 | 7 |
open tracheal system trachea | 6.11e-10 | 2 |
major salivary gland | 6.40e-10 | 2 |
extraembryonic membrane | 9.72e-08 | 14 |
membranous layer | 9.72e-08 | 14 |
tongue | 1.22e-07 | 3 |
gustatory system | 1.22e-07 | 3 |
future tongue | 1.22e-07 | 3 |
saliva-secreting gland | 3.85e-07 | 6 |
gland of oral region | 3.85e-07 | 6 |
gland of foregut | 3.85e-07 | 6 |
oral gland | 3.85e-07 | 6 |
oral cavity | 3.85e-07 | 6 |
oral opening | 5.61e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.19e-10 | 2 |