FFCP PHASE1:Hg19::chr1:144994971..144994982,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9659 | |EntrezGene=9659 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15580 | |HGNC=15580 | ||
|TSSclassifier=strong | |||
|UniProt=Q5VU43 | |UniProt=Q5VU43 | ||
|association_with_transcript=39bp_to_ENST00000369356,NM_001002812,NM_014644,uc001elk.1,uc001elw.3,uc001emc.1,uc001emd.1,uc001emg.1_5end | |association_with_transcript=39bp_to_ENST00000369356,NM_001002812,NM_014644,uc001elk.1,uc001elw.3,uc001emc.1,uc001emd.1,uc001emg.1_5end | ||
|cluster_id=chr1:144994971..144994982,- | |||
|description=CAGE_peak_16_at_PDE4DIP_5end | |description=CAGE_peak_16_at_PDE4DIP_5end | ||
|id=chr1:144994971..144994982,- | |id=chr1:144994971..144994982,- | ||
|ontology_enrichment_celltype=CL:0002541;1.58e-07;3 | |ontology_enrichment_celltype=CL:0000188!3.65e-09!9;CL:0002541!9.29e-07!3 | ||
| | |ontology_enrichment_celltype_v019=CL:0002541;1.58e-07;3 | ||
|ontology_enrichment_disease=DOID:114;2.26e-11;2!DOID:1036;4.85e-11;8 | |ontology_enrichment_celltype_v019_2=CL:0002541,1.69e-07,3 | ||
|ontology_enrichment_uberon=UBERON:0004151;1.98e-16;3!UBERON:0003978;2.92e-16;3!UBERON:0000946;2.92e-16;3!UBERON:0007100;1.57e-15;25!UBERON:0002081;1.49e-11;2!UBERON:0002133;2.78e-11;2!UBERON:0005090;3.00e-11;2!UBERON:0001630;3.00e-11;2!UBERON:0000341;3.88e-11;2!UBERON:0000948;4.60e-08;22!UBERON:0001723;6.80e-08;3!UBERON:0001033;6.80e-08;3!UBERON:0001134;8.53e-08;16!UBERON:0002036;8.53e-08;16!UBERON:0003124;1.58e-07;3!UBERON:0000920;1.58e-07;3!UBERON:0002079;7.90e-07;1 | |ontology_enrichment_development_v019=UBERON:0005062;2.54e-12;4!UBERON:0007284;2.54e-12;4!UBERON:0010227;7.90e-07;1 | ||
|ontology_enrichment_disease=DOID:1036!4.93e-09!8 | |||
|ontology_enrichment_disease_v019=DOID:114;2.26e-11;2!DOID:1036;4.85e-11;8 | |||
|ontology_enrichment_disease_v019_2=DOID:114,2.32e-11,2;DOID:1036,4.85e-11,8 | |||
|ontology_enrichment_uberon=UBERON:0007023!5.53e-18!115;UBERON:0004151!1.96e-07!3;UBERON:0003978!2.26e-07!3;UBERON:0009751!2.26e-07!3;UBERON:0000946!2.26e-07!3;UBERON:0002523!2.26e-07!3;UBERON:0005983!2.26e-07!3;UBERON:0002165!2.26e-07!3;UBERON:0002062!2.26e-07!3;UBERON:0007280!2.26e-07!3;UBERON:0000476!9.29e-07!3;UBERON:0000920!9.29e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0004151;1.98e-16;3!UBERON:0003978;2.92e-16;3!UBERON:0000946;2.92e-16;3!UBERON:0007100;1.57e-15;25!UBERON:0002081;1.49e-11;2!UBERON:0002133;2.78e-11;2!UBERON:0005090;3.00e-11;2!UBERON:0001630;3.00e-11;2!UBERON:0000341;3.88e-11;2!UBERON:0000948;4.60e-08;22!UBERON:0001723;6.80e-08;3!UBERON:0001033;6.80e-08;3!UBERON:0001134;8.53e-08;16!UBERON:0002036;8.53e-08;16!UBERON:0003124;1.58e-07;3!UBERON:0000920;1.58e-07;3!UBERON:0002079;7.90e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004151,1.93e-16,3;UBERON:0003978,2.78e-16,3;UBERON:0009751,2.78e-16,3;UBERON:0000946,2.78e-16,3;UBERON:0002523,2.78e-16,3;UBERON:0005983,2.78e-16,3;UBERON:0002165,2.78e-16,3;UBERON:0002062,2.78e-16,3;UBERON:0007280,2.78e-16,3;UBERON:0007100,2.93e-14,27;UBERON:0002081,1.45e-11,2;UBERON:0010227,1.45e-11,2;UBERON:0002133,2.71e-11,2;UBERON:0005090,3.00e-11,2;UBERON:0001630,3.00e-11,2;UBERON:0000341,4.08e-11,2;UBERON:0003103,1.31e-08,68;UBERON:0001723,6.80e-08,3;UBERON:0001033,6.80e-08,3;UBERON:0010056,6.80e-08,3;UBERON:0000920,1.69e-07,3;UBERON:0000948,2.43e-07,24;UBERON:0005498,2.43e-07,24;UBERON:0004140,2.43e-07,24;UBERON:0009881,2.43e-07,24;UBERON:0004141,2.43e-07,24;UBERON:0003084,2.43e-07,24;UBERON:0007005,2.43e-07,24;UBERON:0004139,2.43e-07,24;UBERON:0004291,2.43e-07,24;UBERON:0004797,3.10e-07,7;UBERON:0007023,6.61e-07,114;UBERON:0003124,7.32e-07,7;UBERON:0002079,7.90e-07,1 | |||
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| ||
|short_description=p16@PDE4DIP | |short_description=p16@PDE4DIP | ||
}} | }} |
Latest revision as of 16:54, 16 September 2015
Short description: | p16@PDE4DIP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_PDE4DIP_5end |
Coexpression cluster: | NA |
Association with transcript: | 39bp_to_ENST00000369356, NM_001002812, NM_014644, uc001elk.1, uc001elw.3, uc001emc.1, uc001emd.1, uc001emg.1_5end |
EntrezGene: | PDE4DIP |
HGNC: | 15580 |
UniProt: | Q5VU43 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.69e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
cardiac chamber | 1.93e-16 | 3 |
valve | 2.78e-16 | 3 |
cardiac mesenchyme | 2.78e-16 | 3 |
cardial valve | 2.78e-16 | 3 |
tunica intima | 2.78e-16 | 3 |
heart layer | 2.78e-16 | 3 |
endocardium | 2.78e-16 | 3 |
endocardial cushion | 2.78e-16 | 3 |
presumptive endocardium | 2.78e-16 | 3 |
primary circulatory organ | 2.93e-14 | 27 |
cardiac atrium | 1.45e-11 | 2 |
future cardiac atrium | 1.45e-11 | 2 |
atrioventricular valve | 2.71e-11 | 2 |
muscle structure | 3.00e-11 | 2 |
muscle organ | 3.00e-11 | 2 |
throat | 4.08e-11 | 2 |
compound organ | 1.31e-08 | 68 |
tongue | 6.80e-08 | 3 |
gustatory system | 6.80e-08 | 3 |
future tongue | 6.80e-08 | 3 |
egg chorion | 1.69e-07 | 3 |
heart | 2.43e-07 | 24 |
primitive heart tube | 2.43e-07 | 24 |
primary heart field | 2.43e-07 | 24 |
anterior lateral plate mesoderm | 2.43e-07 | 24 |
heart tube | 2.43e-07 | 24 |
heart primordium | 2.43e-07 | 24 |
cardiac mesoderm | 2.43e-07 | 24 |
cardiogenic plate | 2.43e-07 | 24 |
heart rudiment | 2.43e-07 | 24 |
blood vessel layer | 3.10e-07 | 7 |
adult organism | 6.61e-07 | 114 |
chorion | 7.32e-07 | 7 |
left cardiac atrium | 7.90e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
heart disease | 2.32e-11 | 2 |
chronic leukemia | 4.85e-11 | 8 |