FFCP PHASE1:Hg19::chr12:118498864..118498873,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:118498864..118498873,- to FFCP PHASE1:Hg19::chr12:118498864..118498873,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55884 | |EntrezGene=55884 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19222 | |HGNC=19222 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=20bp_to_ENST00000540129_5end | |||
|cluster_id=chr12:118498864..118498873,- | |||
|description=CAGE_peak_6_at_WSB2_5end | |||
|id=chr12:118498864..118498873,- | |||
|ontology_enrichment_celltype=CL:0000055!7.93e-13!180;CL:0000183!3.47e-07!59;CL:0000680!5.86e-07!57;CL:0000056!5.86e-07!57;CL:0000355!5.86e-07!57 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,3.40e-08,427;CL:0000723,7.79e-08,433;CL:0000034,1.18e-07,441;CL:0000680,9.72e-07,58;CL:0000056,9.72e-07,58;CL:0000355,9.72e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!8.86e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;4.87e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,7.81e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0000468!1.91e-11!659;UBERON:0000467!6.42e-10!625;UBERON:0000480!1.11e-09!626;UBERON:0000119!3.72e-09!312;UBERON:0000483!1.75e-08!309;UBERON:0000922!2.29e-08!612;UBERON:0000475!2.52e-08!365;UBERON:0000025!6.24e-08!194;UBERON:0000923!7.00e-08!604;UBERON:0005291!7.00e-08!604;UBERON:0006598!7.00e-08!604;UBERON:0002532!7.00e-08!604;UBERON:0001134!7.96e-08!61;UBERON:0002036!7.96e-08!61;UBERON:0003082!7.96e-08!61;UBERON:0002385!8.17e-08!63;UBERON:0001015!8.17e-08!63;UBERON:0000383!8.17e-08!63;UBERON:0002050!1.13e-07!605;UBERON:0005423!1.13e-07!605;UBERON:0000481!3.08e-07!347;UBERON:0003075!6.91e-07!86;UBERON:0007284!6.91e-07!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,6.95e-08,62;UBERON:0002036,6.95e-08,62;UBERON:0003082,6.95e-08,62;UBERON:0002385,2.49e-07,64;UBERON:0001015,2.49e-07,64;UBERON:0000383,2.49e-07,64;UBERON:0007503,9.61e-07,78 | |||
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| ||
|short_description=p6@WSB2 | |||
}} | }} |
Latest revision as of 17:03, 16 September 2015
Short description: | p6@WSB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_WSB2_5end |
Coexpression cluster: | NA |
Association with transcript: | 20bp_to_ENST00000540129_5end |
EntrezGene: | WSB2 |
HGNC: | 19222 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 3.40e-08 | 427 |
somatic stem cell | 7.79e-08 | 433 |
stem cell | 1.18e-07 | 441 |
muscle precursor cell | 9.72e-07 | 58 |
myoblast | 9.72e-07 | 58 |
multi-potent skeletal muscle stem cell | 9.72e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 6.95e-08 | 62 |
striated muscle tissue | 6.95e-08 | 62 |
myotome | 6.95e-08 | 62 |
muscle tissue | 2.49e-07 | 64 |
musculature | 2.49e-07 | 64 |
musculature of body | 2.49e-07 | 64 |
epithelial vesicle | 9.61e-07 | 78 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 7.81e-08 | 14 |