FFCP PHASE1:Hg19::chr7:139741849..139741879,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64761 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21919 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-321bp_to_ENST00000470515_5end | |||
|cluster_id=chr7:139741849..139741879,- | |||
|coexpression_cluster_id=C1696 | |||
|description=CAGE_peak_12_at_PARP12_5end | |||
|id=chr7:139741849..139741879,- | |||
|ontology_enrichment_celltype=CL:0002139!4.39e-61!24;CL:0000071!1.94e-56!18;CL:0002546!1.94e-56!18;CL:0000115!1.01e-45!35;CL:1000413!6.83e-38!9;CL:0002078!1.59e-35!44;CL:0002543!3.56e-32!6;CL:0000213!1.76e-26!57;CL:0000215!1.76e-26!57;CL:0002544!1.19e-22!6;CL:0002618!8.96e-17!3;CL:0000222!9.99e-17!119;CL:0000076!3.46e-14!62;CL:0005020!3.35e-08!6;CL:0002138!3.35e-08!6;CL:0005022!3.35e-08!6;CL:0000623!9.40e-08!3;CL:0000825!9.40e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0000071;2.31e-119;18!CL:1000413;5.14e-97;9!CL:0002139;1.78e-89;24!CL:0000115;9.59e-54;36!CL:0002543;4.14e-48;6!CL:0002544;5.61e-48;6!CL:0002078;1.42e-35;45!CL:0000076;3.18e-24;63!CL:0000213;5.74e-24;58!CL:0000215;5.74e-24;58!CL:0002545;2.72e-10;2!CL:0002618;2.79e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000071,2.32e-119,18;CL:0002546,2.32e-119,18;CL:1000413,5.95e-97,9;CL:0002139,1.78e-89,24;CL:0000115,1.45e-59,36;CL:0002543,3.67e-48,6;CL:0002544,6.73e-48,6;CL:0002078,1.38e-47,45;CL:0000213,7.82e-37,58;CL:0000215,7.82e-37,58;CL:0000076,7.09e-34,63;CL:0000222,2.20e-17,121;CL:0002545,3.27e-10,2;CL:0002321,5.72e-08,250;CL:0000066,6.20e-08,253;CL:0002618,2.32e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002546;2.31e-119;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!1.94e-56!18;UBERON:0004638!1.94e-56!18;UBERON:0004852!1.94e-56!18;UBERON:0000487!1.29e-45!22;UBERON:0006914!9.06e-40!25;UBERON:0003915!6.83e-38!9;UBERON:0004700!6.83e-38!9;UBERON:0001917!6.83e-38!9;UBERON:0000055!3.05e-29!69;UBERON:0002049!1.23e-27!79;UBERON:0007798!1.23e-27!79;UBERON:0001981!7.26e-25!60;UBERON:0007500!7.26e-25!60;UBERON:0004537!7.26e-25!60;UBERON:0006965!7.26e-25!60;UBERON:0001638!2.87e-21!9;UBERON:0003920!2.87e-21!9;UBERON:0004582!2.87e-21!9;UBERON:0004535!1.91e-18!110;UBERON:0001009!7.99e-18!113;UBERON:0004872!1.36e-16!84;UBERON:0001637!8.08e-16!42;UBERON:0003509!8.08e-16!42;UBERON:0004572!8.08e-16!42;UBERON:0003914!1.42e-13!118;UBERON:0000490!3.23e-12!138;UBERON:0000947!1.33e-11!21;UBERON:0010191!1.33e-11!21;UBERON:0002066!2.93e-10!5;UBERON:0003081!8.55e-08!216;UBERON:0000025!2.43e-07!194;UBERON:0004111!2.72e-07!241;UBERON:0004573!4.85e-07!33;UBERON:0004571!4.85e-07!33;UBERON:0000477!9.18e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.31e-119;18!UBERON:0001986;2.31e-119;18!UBERON:0004852;2.31e-119;18!UBERON:0000487;1.25e-97;22!UBERON:0003915;5.14e-97;9!UBERON:0004700;5.14e-97;9!UBERON:0001917;5.14e-97;9!UBERON:0006914;6.87e-86;25!UBERON:0000490;1.40e-61;33!UBERON:0001638;2.84e-32;9!UBERON:0003920;2.84e-32;9!UBERON:0004582;2.84e-32;9!UBERON:0007500;1.31e-23;56!UBERON:0001981;1.31e-23;56!UBERON:0004537;1.31e-23;56!UBERON:0000055;2.40e-20;65!UBERON:0001637;3.18e-19;42!UBERON:0003509;3.18e-19;42!UBERON:0004572;3.18e-19;42!UBERON:0000947;4.68e-14;21!UBERON:0010191;4.68e-14;21!UBERON:0003914;4.84e-13;74!UBERON:0002049;3.41e-11;75!UBERON:0007798;3.41e-11;75!UBERON:0005800;2.72e-10;2!UBERON:0001515;2.72e-10;2!UBERON:0000025;1.20e-09;93!UBERON:0004573;1.52e-09;33!UBERON:0004571;1.52e-09;33!UBERON:0001009;5.27e-09;112!UBERON:0000483;2.38e-08;136!UBERON:0000119;3.54e-08;139!UBERON:0004111;4.57e-08;130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,2.32e-119,18;UBERON:0001986,2.32e-119,18;UBERON:0004852,2.32e-119,18;UBERON:0000487,1.25e-97,22;UBERON:0003915,5.95e-97,9;UBERON:0004700,5.95e-97,9;UBERON:0001917,5.95e-97,9;UBERON:0006914,6.89e-86,25;UBERON:0007500,3.35e-36,59;UBERON:0001981,3.35e-36,59;UBERON:0004537,3.35e-36,59;UBERON:0006965,3.35e-36,59;UBERON:0001638,2.62e-32,9;UBERON:0003920,2.62e-32,9;UBERON:0004582,2.62e-32,9;UBERON:0000055,2.37e-31,68;UBERON:0002049,2.85e-27,78;UBERON:0007798,2.85e-27,78;UBERON:0004872,1.34e-25,83;UBERON:0001637,1.02e-20,42;UBERON:0003509,1.02e-20,42;UBERON:0004572,1.02e-20,42;UBERON:0004535,2.30e-19,109;UBERON:0001009,7.88e-19,112;UBERON:0003914,5.33e-18,117;UBERON:0000490,4.25e-14,148;UBERON:0000947,4.93e-14,21;UBERON:0010191,4.93e-14,21;UBERON:0000025,1.20e-10,192;UBERON:0005800,3.27e-10,2;UBERON:0001515,3.27e-10,2;UBERON:0003081,4.95e-10,203;UBERON:0004573,4.72e-09,33;UBERON:0004571,4.72e-09,33;UBERON:0004111,2.27e-08,240 | |||
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|short_description=p12@PARP12 | |||
}} |
Latest revision as of 17:09, 16 September 2015
Short description: | p12@PARP12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_PARP12_5end |
Coexpression cluster: | C1696_Endothelial_Renal_chronic_Lymphatic_Fibroblast_Hepatic_Mesenchymal |
Association with transcript: | -321bp_to_ENST00000470515_5end |
EntrezGene: | PARP12 |
HGNC: | 21919 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood vessel endothelial cell | 2.32e-119 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.32e-119 | 18 |
endothelial cell of artery | 5.95e-97 | 9 |
endothelial cell of vascular tree | 1.78e-89 | 24 |
endothelial cell | 1.45e-59 | 36 |
vein endothelial cell | 3.67e-48 | 6 |
aortic endothelial cell | 6.73e-48 | 6 |
meso-epithelial cell | 1.38e-47 | 45 |
lining cell | 7.82e-37 | 58 |
barrier cell | 7.82e-37 | 58 |
squamous epithelial cell | 7.09e-34 | 63 |
mesodermal cell | 2.20e-17 | 121 |
thoracic aorta endothelial cell | 3.27e-10 | 2 |
embryonic cell | 5.72e-08 | 250 |
epithelial cell | 6.20e-08 | 253 |
endothelial cell of umbilical vein | 2.32e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 2.32e-119 | 18 |
endothelium | 2.32e-119 | 18 |
cardiovascular system endothelium | 2.32e-119 | 18 |
simple squamous epithelium | 1.25e-97 | 22 |
endothelial tube | 5.95e-97 | 9 |
arterial system endothelium | 5.95e-97 | 9 |
endothelium of artery | 5.95e-97 | 9 |
squamous epithelium | 6.89e-86 | 25 |
epithelial tube open at both ends | 3.35e-36 | 59 |
blood vessel | 3.35e-36 | 59 |
blood vasculature | 3.35e-36 | 59 |
vascular cord | 3.35e-36 | 59 |
vein | 2.62e-32 | 9 |
venous blood vessel | 2.62e-32 | 9 |
venous system | 2.62e-32 | 9 |
vessel | 2.37e-31 | 68 |
vasculature | 2.85e-27 | 78 |
vascular system | 2.85e-27 | 78 |
splanchnic layer of lateral plate mesoderm | 1.34e-25 | 83 |
artery | 1.02e-20 | 42 |
arterial blood vessel | 1.02e-20 | 42 |
arterial system | 1.02e-20 | 42 |
cardiovascular system | 2.30e-19 | 109 |
circulatory system | 7.88e-19 | 112 |
epithelial tube | 5.33e-18 | 117 |
unilaminar epithelium | 4.25e-14 | 148 |
aorta | 4.93e-14 | 21 |
aortic system | 4.93e-14 | 21 |
tube | 1.20e-10 | 192 |
segment of aorta | 3.27e-10 | 2 |
thoracic aorta | 3.27e-10 | 2 |
lateral plate mesoderm | 4.95e-10 | 203 |
systemic artery | 4.72e-09 | 33 |
systemic arterial system | 4.72e-09 | 33 |
anatomical conduit | 2.27e-08 | 240 |