FFCP PHASE1:Hg19::chr2:27851885..27851930,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:27851885..27851930,+ to FFCP PHASE1:Hg19::chr2:27851885..27851930,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=11321 | |EntrezGene=11321 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17030 | |HGNC=17030 | ||
|TSSclassifier=strong | |||
|UniProt=F8WD09 | |UniProt=F8WD09 | ||
|association_with_transcript=0bp_to_ENST00000436280,ENST00000478484_5end | |||
|cluster_id=chr2:27851885..27851930,+ | |||
|coexpression_cluster_id=C102 | |||
|description=CAGE_peak_1_at_GPN1_5end | |||
|id=chr2:27851885..27851930,+ | |||
|ontology_enrichment_celltype=CL:0000012!4.32e-20!682;CL:0000548!7.70e-20!679;CL:0000004!7.70e-20!679;CL:0000255!7.70e-20!679;CL:0000003!1.23e-17!722;CL:0000066!2.64e-11!254;CL:0000144!3.74e-10!625;CL:0000063!7.57e-09!578;CL:0000542!4.11e-07!53;CL:0000051!4.11e-07!53;CL:0002321!4.13e-07!248;CL:0000838!6.55e-07!52;CL:0000220!9.39e-07!246 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.20e-11,253;CL:0000542,4.11e-07,53;CL:0000051,4.11e-07,53;CL:0002321,5.94e-07,250;CL:0000838,6.55e-07,52 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!1.30e-10!106;DOID:14566!1.35e-09!239;DOID:0050687!4.18e-09!143;DOID:162!5.23e-09!235 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.30e-10,106;DOID:14566,1.35e-09,239;DOID:0050687,4.18e-09,143;DOID:162,5.23e-09,235 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@GPN1 | |||
}} | }} |
Latest revision as of 17:56, 16 September 2015
Short description: | p1@GPN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GPN1_5end |
Coexpression cluster: | C102_neuroblastoma_testicular_pituitary_carcinosarcoma_rectum_acantholytic_iPS |
Association with transcript: | 0bp_to_ENST00000436280, ENST00000478484_5end |
EntrezGene: | GPN1 |
HGNC: | 17030 |
UniProt: | F8WD09 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.20e-11 | 253 |
lymphocyte | 4.11e-07 | 53 |
common lymphoid progenitor | 4.11e-07 | 53 |
embryonic cell | 5.94e-07 | 250 |
lymphoid lineage restricted progenitor cell | 6.55e-07 | 52 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.30e-10 | 106 |
disease of cellular proliferation | 1.35e-09 | 239 |
cell type cancer | 4.18e-09 | 143 |
cancer | 5.23e-09 | 235 |