FFCP PHASE1:Hg19::chr13:19755913..19755970,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=113457,7278 | |EntrezGene=113457,7278 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12408,24071 | |HGNC=12408,24071 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000360801,uc009zzj.2_5end | |association_with_transcript=0bp_to_ENST00000360801,uc009zzj.2_5end | ||
|cluster_id=chr13:19755913..19755970,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_1_at_TUBA3C_5end,CAGE_peak_1_at_TUBA3D_5end | |description=CAGE_peak_1_at_TUBA3C_5end,CAGE_peak_1_at_TUBA3D_5end | ||
|id=chr13:19755913..19755970,- | |id=chr13:19755913..19755970,- | ||
|ontology_enrichment_celltype=CL:1000415!6.29e-09!2 | |ontology_enrichment_celltype=CL:1000415!6.29e-09!2 | ||
|ontology_enrichment_celltype_v019=CL:0000054;7.20e-07;2!CL:0000137;7.20e-07;2!CL:0000092;7.20e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000054,7.20e-07,2;CL:0000137,7.20e-07,2;CL:0000092,7.20e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1036!1.23e-12!8 | |ontology_enrichment_disease=DOID:1036!1.23e-12!8 | ||
|ontology_enrichment_disease_v019=DOID:0060085;1.75e-12;1!DOID:3165;1.75e-12;1!DOID:0060121;1.75e-12;1!DOID:2438;1.75e-12;1!DOID:4418;1.75e-12;1!DOID:200;7.20e-07;2!DOID:4305;7.20e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:0060085,1.75e-12,1;DOID:3165,1.75e-12,1;DOID:0060121,1.75e-12,1;DOID:2438,1.75e-12,1;DOID:4418,1.75e-12,1;DOID:200,7.20e-07,2;DOID:4305,7.20e-07,2 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001282;2.60e-12;1!UBERON:0009842;2.60e-12;1!UBERON:0003704;2.60e-12;1!UBERON:0001171;2.60e-12;1!UBERON:0001172;2.60e-12;1!UBERON:0001301;4.31e-12;1!UBERON:0003135;8.86e-10;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001282,2.75e-12,1;UBERON:0009842,2.75e-12,1;UBERON:0003704,2.75e-12,1;UBERON:0001171,2.75e-12,1;UBERON:0001172,2.75e-12,1;UBERON:0001301,4.81e-12,1;UBERON:0003135,9.13e-10,11 | |||
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| ||
|short_description=p1@TUBA3C,p1@TUBA3D | |short_description=p1@TUBA3C,p1@TUBA3D | ||
}} | }} |
Latest revision as of 18:00, 16 September 2015
Short description: | p1@TUBA3C, p1@TUBA3D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TUBA3C_5end, CAGE_peak_1_at_TUBA3D_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000360801, uc009zzj.2_5end |
EntrezGene: | 113457,7278 |
HGNC: | 24071&submit=Submit 12408, 24071 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone matrix secreting cell | 7.20e-07 | 2 |
osteocyte | 7.20e-07 | 2 |
osteoclast | 7.20e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
intralobular bile duct | 2.75e-12 | 1 |
acinus | 2.75e-12 | 1 |
intrahepatic bile duct | 2.75e-12 | 1 |
portal lobule | 2.75e-12 | 1 |
hepatic acinus | 2.75e-12 | 1 |
epididymis | 4.81e-12 | 1 |
male reproductive organ | 9.13e-10 | 11 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 1.75e-12 | 1 |
skin benign neoplasm | 1.75e-12 | 1 |
integumentary system benign neoplasm | 1.75e-12 | 1 |
dermis tumor | 1.75e-12 | 1 |
cutaneous fibrous histiocytoma | 1.75e-12 | 1 |
giant cell tumor | 7.20e-07 | 2 |
bone giant cell tumor | 7.20e-07 | 2 |