FFCP PHASE1:Hg19::chr17:61920116..61920131,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6603 | |EntrezGene=6603 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11107 | |HGNC=11107 | ||
|TSSclassifier=strong | |||
|UniProt=Q92925 | |UniProt=Q92925 | ||
|association_with_transcript=-187bp_to_ENST00000225742_5end | |association_with_transcript=-187bp_to_ENST00000225742_5end | ||
|cluster_id=chr17:61920116..61920131,- | |||
|description=CAGE_peak_5_at_SMARCD2_5end | |description=CAGE_peak_5_at_SMARCD2_5end | ||
|id=chr17:61920116..61920131,- | |id=chr17:61920116..61920131,- | ||
|ontology_enrichment_celltype=CL:0000066!1.36e-08!254;CL:0000548!9.73e-08!679;CL:0000004!9.73e-08!679;CL:0000255!9.73e-08!679;CL:0000012!1.61e-07!682;CL:0000063!9.15e-07!578 | |ontology_enrichment_celltype=CL:0000066!1.36e-08!254;CL:0000548!9.73e-08!679;CL:0000004!9.73e-08!679;CL:0000255!9.73e-08!679;CL:0000012!1.61e-07!682;CL:0000063!9.15e-07!578 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p5@SMARCD2 | |short_description=p5@SMARCD2 | ||
}} | }} |
Latest revision as of 18:27, 16 September 2015
Short description: | p5@SMARCD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SMARCD2_5end |
Coexpression cluster: | NA |
Association with transcript: | -187bp_to_ENST00000225742_5end |
EntrezGene: | SMARCD2 |
HGNC: | 11107 |
UniProt: | Q92925 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data