FFCP PHASE1:Hg19::chr7:141438118..141438209,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:141438118..141438209,+
|short_description=p1@SSBP1
|description=CAGE_peak_1_at_SSBP1_5end
|association_with_transcript=0bp_to_ENST00000265304,ENST000004614...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6742 | |EntrezGene=6742 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11317 | |HGNC=11317 | ||
|TSSclassifier=strong | |||
|UniProt=Q04837,C9K0U8,E7EUY5,A4D1U3 | |UniProt=Q04837,C9K0U8,E7EUY5,A4D1U3 | ||
|association_with_transcript=0bp_to_ENST00000265304,ENST00000461433,ENST00000463093,ENST00000465167,ENST00000465582,ENST00000467681,ENST00000468267,ENST00000469123,ENST00000489378,ENST00000496622,ENST00000498107,NM_003143,uc003vwo.1,uc010lnp.1,uc011kri.1_5end | |||
|cluster_id=chr7:141438118..141438209,+ | |||
|description=CAGE_peak_1_at_SSBP1_5end | |||
|id=chr7:141438118..141438209,+ | |||
|ontology_enrichment_celltype=CL:0000012!1.21e-25!682;CL:0000548!1.64e-24!679;CL:0000004!1.64e-24!679;CL:0000255!1.64e-24!679;CL:0000003!3.68e-20!722;CL:0000144!1.57e-13!625;CL:0000063!3.57e-09!578;CL:0002371!4.02e-09!591;CL:0000055!6.90e-08!180;CL:0000034!3.93e-07!444;CL:0002321!6.19e-07!248 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,6.05e-07,250;CL:0000034,8.89e-07,441 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!6.14e-23!239;DOID:162!4.36e-22!235;DOID:0050686!1.31e-12!137;DOID:0050687!1.04e-11!143;DOID:2531!5.09e-09!51;DOID:0060083!5.09e-09!51;DOID:305!4.61e-08!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,6.14e-23,239;DOID:162,4.36e-22,235;DOID:0050686,1.31e-12,137;DOID:0050687,1.04e-11,143;DOID:2531,5.09e-09,51;DOID:0060083,5.09e-09,51;DOID:305,4.61e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0000914!6.44e-07!83;UBERON:0002329!6.44e-07!83;UBERON:0003077!6.44e-07!83;UBERON:0003059!6.44e-07!83;UBERON:0007282!6.44e-07!83;UBERON:0009618!6.44e-07!83;UBERON:0007285!6.44e-07!83 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@SSBP1 | |||
}} | }} |
Latest revision as of 18:49, 16 September 2015
Short description: | p1@SSBP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SSBP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000265304, ENST00000461433, ENST00000463093, ENST00000465167, ENST00000465582, ENST00000467681, ENST00000468267, ENST00000469123, ENST00000489378, ENST00000496622, ENST00000498107, NM_003143, uc003vwo.1, uc010lnp.1, uc011kri.1_5end |
EntrezGene: | SSBP1 |
HGNC: | 11317 |
UniProt: | Q04837C9K0U8E7EUY5A4D1U3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 6.05e-07 | 250 |
stem cell | 8.89e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 6.14e-23 | 239 |
cancer | 4.36e-22 | 235 |
organ system cancer | 1.31e-12 | 137 |
cell type cancer | 1.04e-11 | 143 |
hematologic cancer | 5.09e-09 | 51 |
immune system cancer | 5.09e-09 | 51 |
carcinoma | 4.61e-08 | 106 |