FFCP PHASE1:Hg19::chr9:14922428..14922432,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=6539 | |HGNC=6539 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-96bp_to_ENST00000397561_5end | |association_with_transcript=-96bp_to_ENST00000397561_5end | ||
|cluster_id=chr9:14922428..14922432,- | |||
|coexpression_cluster_id=C3123 | |coexpression_cluster_id=C3123 | ||
|description=CAGE_peak_1_at_LDHAP4_5end | |description=CAGE_peak_1_at_LDHAP4_5end | ||
|id=chr9:14922428..14922432,- | |id=chr9:14922428..14922432,- | ||
|ontology_enrichment_celltype=CL:0000548!9.89e-20!679;CL:0000004!9.89e-20!679;CL:0000255!9.89e-20!679;CL:0000012!4.06e-19!682;CL:0000055!2.88e-16!180;CL:0000144!3.68e-14!625;CL:0002371!2.30e-13!591;CL:0000003!2.00e-12!722;CL:0000057!2.24e-12!75;CL:0000063!4.15e-11!578;CL:0002620!2.12e-07!23;CL:0000220!2.61e-07!246;CL:0002321!3.65e-07!248;CL:0000066!3.88e-07!254;CL:0002334!7.98e-07!12 | |ontology_enrichment_celltype=CL:0000548!9.89e-20!679;CL:0000004!9.89e-20!679;CL:0000255!9.89e-20!679;CL:0000012!4.06e-19!682;CL:0000055!2.88e-16!180;CL:0000144!3.68e-14!625;CL:0002371!2.30e-13!591;CL:0000003!2.00e-12!722;CL:0000057!2.24e-12!75;CL:0000063!4.15e-11!578;CL:0002620!2.12e-07!23;CL:0000220!2.61e-07!246;CL:0002321!3.65e-07!248;CL:0000066!3.88e-07!254;CL:0002334!7.98e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0002620;1.26e-07;23!CL:0002334;1.38e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.64e-14,76;CL:0002620,6.44e-08,23;CL:0000723,6.66e-08,433;CL:0000048,1.28e-07,427;CL:0002334,1.42e-07,12;CL:0000034,1.59e-07,441 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:120;8.24e-07;27!DOID:193;8.46e-07;29 | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002199!2.42e-08!45;UBERON:0002416!2.42e-08!45;UBERON:0001637!7.25e-08!42;UBERON:0003509!7.25e-08!42;UBERON:0004572!7.25e-08!42;UBERON:0003102!1.19e-07!95;UBERON:0002097!6.76e-07!40 | |ontology_enrichment_uberon=UBERON:0002199!2.42e-08!45;UBERON:0002416!2.42e-08!45;UBERON:0001637!7.25e-08!42;UBERON:0003509!7.25e-08!42;UBERON:0004572!7.25e-08!42;UBERON:0003102!1.19e-07!95;UBERON:0002097!6.76e-07!40 | ||
|ontology_enrichment_uberon_v019=UBERON:0001637;4.57e-07;42!UBERON:0003509;4.57e-07;42!UBERON:0004572;4.57e-07;42!UBERON:0004573;6.48e-07;33!UBERON:0004571;6.48e-07;33!UBERON:0002097;9.06e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,1.23e-09,46;UBERON:0002416,1.23e-09,46;UBERON:0001637,3.77e-09,42;UBERON:0003509,3.77e-09,42;UBERON:0004572,3.77e-09,42;UBERON:0002097,5.63e-08,41;UBERON:0003102,7.72e-08,99;UBERON:0004573,1.14e-07,33;UBERON:0004571,1.14e-07,33 | |||
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| ||
|short_description=p1@LDHAP4 | |short_description=p1@LDHAP4 | ||
}} | }} |
Latest revision as of 18:51, 16 September 2015
Short description: | p1@LDHAP4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LDHAP4_5end |
Coexpression cluster: | C3123_basal_Adipocyte_Preadipocyte_Olfactory_serous_mesenchymal_Smooth |
Association with transcript: | -96bp_to_ENST00000397561_5end |
EntrezGene: | NA |
HGNC: | 6539 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.64e-14 | 76 |
skin fibroblast | 6.44e-08 | 23 |
somatic stem cell | 6.66e-08 | 433 |
multi fate stem cell | 1.28e-07 | 427 |
preadipocyte | 1.42e-07 | 12 |
stem cell | 1.59e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
integument | 1.23e-09 | 46 |
integumental system | 1.23e-09 | 46 |
artery | 3.77e-09 | 42 |
arterial blood vessel | 3.77e-09 | 42 |
arterial system | 3.77e-09 | 42 |
skin of body | 5.63e-08 | 41 |
surface structure | 7.72e-08 | 99 |
systemic artery | 1.14e-07 | 33 |
systemic arterial system | 1.14e-07 | 33 |