FFCP PHASE1:Hg19::chr12:120151559..120151570,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11113 | |EntrezGene=11113 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1985 | |HGNC=1985 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000536008_5end | |association_with_transcript=0bp_to_ENST00000536008_5end | ||
|cluster_id=chr12:120151559..120151570,- | |||
|coexpression_cluster_id=C131 | |||
|description=CAGE_peak_14_at_CIT_5end | |description=CAGE_peak_14_at_CIT_5end | ||
|id=chr12:120151559..120151570,- | |id=chr12:120151559..120151570,- | ||
|ontology_enrichment_celltype=CL:0000167!1.59e-08!1;CL:0000164!1.59e-08!1;CL:0000502!1.59e-08!1;CL:0000172!1.59e-08!1;CL:0000173!1.59e-08!1;CL:0002351!1.59e-08!1 | |ontology_enrichment_celltype=CL:0000167!1.59e-08!1;CL:0000164!1.59e-08!1;CL:0000502!1.59e-08!1;CL:0000172!1.59e-08!1;CL:0000173!1.59e-08!1;CL:0002351!1.59e-08!1 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.88e-21;29!UBERON:0001041;8.88e-21;30 | |||
|ontology_enrichment_disease=DOID:4430!1.59e-08!1;DOID:0050619!2.46e-08!1;DOID:1357!2.46e-08!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003127!1.45e-15!2;UBERON:0007023!4.74e-11!115;UBERON:0002171!6.50e-09!1;UBERON:0006518!6.50e-09!1;UBERON:0008949!6.50e-09!1;UBERON:0000101!6.50e-09!1;UBERON:0002167!6.50e-09!1;UBERON:0001764!2.46e-08!1;UBERON:0001825!2.46e-08!1;UBERON:0002372!3.53e-08!1;UBERON:0001961!3.53e-08!1;UBERON:0001744!3.53e-08!1;UBERON:0001735!3.53e-08!1;UBERON:0002581!3.79e-08!1;UBERON:0000065!1.30e-07!53;UBERON:0005178!2.70e-07!34;UBERON:0002224!2.70e-07!34;UBERON:0005181!4.52e-07!35;UBERON:0002046!9.98e-07!5;UBERON:0004117!9.98e-07!5;UBERON:0007689!9.98e-07!5;UBERON:0007123!9.98e-07!5;UBERON:0003091!9.98e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002171;4.66e-66;1!UBERON:0006518;4.66e-66;1!UBERON:0008949;4.66e-66;1!UBERON:0000101;4.66e-66;1!UBERON:0002167;4.66e-66;1!UBERON:0002048;7.08e-28;22!UBERON:0000117;7.08e-28;22!UBERON:0000171;7.08e-28;22!UBERON:0000170;7.08e-28;22!UBERON:0005178;1.94e-16;34!UBERON:0002224;1.94e-16;34!UBERON:0000065;3.50e-13;44!UBERON:0005181;5.80e-13;35!UBERON:0000915;6.75e-10;52!UBERON:0001004;7.34e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,4.66e-66,1;UBERON:0006518,4.66e-66,1;UBERON:0008949,4.66e-66,1;UBERON:0000101,4.66e-66,1;UBERON:0002167,4.66e-66,1;UBERON:0002048,7.08e-28,22;UBERON:0000117,7.08e-28,22;UBERON:0000171,7.08e-28,22;UBERON:0000170,7.08e-28,22;UBERON:0005597,7.08e-28,22;UBERON:0000118,7.08e-28,22;UBERON:0005178,1.78e-18,34;UBERON:0002224,1.78e-18,34;UBERON:0005181,5.55e-18,35;UBERON:0005153,4.49e-17,37;UBERON:0008947,1.18e-16,38;UBERON:0003258,1.18e-16,38;UBERON:0005157,1.10e-13,47;UBERON:0000915,1.77e-12,52;UBERON:0000065,4.68e-12,54;UBERON:0001004,4.40e-09,74;UBERON:0005911,2.70e-08,82;UBERON:0001041,7.10e-08,87;UBERON:0005177,6.45e-07,101 | |||
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|short_description=p14@CIT | |short_description=p14@CIT | ||
}} | }} |
Latest revision as of 18:52, 16 September 2015
Short description: | p14@CIT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_CIT_5end |
Coexpression cluster: | C131_lung_trachea_Alveolar_thyroid_umbilical_throat_skin |
Association with transcript: | 0bp_to_ENST00000536008_5end |
EntrezGene: | CIT |
HGNC: | 1985 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 4.66e-66 | 1 |
right lung lobe | 4.66e-66 | 1 |
lower lobe of lung | 4.66e-66 | 1 |
lobe of lung | 4.66e-66 | 1 |
right lung | 4.66e-66 | 1 |
lung | 7.08e-28 | 22 |
respiratory tube | 7.08e-28 | 22 |
respiration organ | 7.08e-28 | 22 |
pair of lungs | 7.08e-28 | 22 |
lung primordium | 7.08e-28 | 22 |
lung bud | 7.08e-28 | 22 |
thoracic cavity element | 1.78e-18 | 34 |
thoracic cavity | 1.78e-18 | 34 |
thoracic segment organ | 5.55e-18 | 35 |
epithelial bud | 4.49e-17 | 37 |
respiratory primordium | 1.18e-16 | 38 |
endoderm of foregut | 1.18e-16 | 38 |
epithelial fold | 1.10e-13 | 47 |
thoracic segment of trunk | 1.77e-12 | 52 |
respiratory tract | 4.68e-12 | 54 |
respiratory system | 4.40e-09 | 74 |
endo-epithelium | 2.70e-08 | 82 |
foregut | 7.10e-08 | 87 |
trunk region element | 6.45e-07 | 101 |