FFCP PHASE1:Hg19::chr1:145727545..145727565,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5174 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8821 | |||
|TSSclassifier=strong | |||
|UniProt=Q5T2W1,B4DPB9,E7EU02 | |||
|association_with_transcript=-100bp_to_NM_001201325,NM_001201326,NM_002614_5end | |||
|cluster_id=chr1:145727545..145727565,+ | |||
|coexpression_cluster_id=C2520 | |||
|description=CAGE_peak_3_at_PDZK1_5end | |||
|id=chr1:145727545..145727565,+ | |||
|ontology_enrichment_celltype=CL:0000349!3.61e-09!3;CL:0002577!3.61e-09!3;CL:0002541!1.40e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0000349;3.12e-34;19!CL:0002577;1.25e-21;3!CL:0002536;7.15e-15;2!CL:0002537;1.06e-12;5!CL:0002541;5.61e-10;3!CL:0002563;1.37e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,2.86e-34,19;CL:0002577,1.20e-21,3;CL:0002536,6.45e-15,2;CL:0002537,1.06e-12,5;CL:0002541,5.49e-10,3;CL:0002563,1.39e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0006215;9.99e-21;3!UBERON:0000358;7.59e-08;1 | |||
|ontology_enrichment_disease=DOID:305!8.46e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!2.29e-25!14;UBERON:0000158!2.29e-25!14;UBERON:0003124!4.77e-18!7;UBERON:0000478!6.36e-16!24;UBERON:0001987!3.60e-11!4;UBERON:0004340!3.60e-11!4;UBERON:0000305!1.08e-09!7;UBERON:0003076!5.04e-09!15;UBERON:0003057!5.04e-09!15;UBERON:0000476!1.40e-08!3;UBERON:0000920!1.40e-08!3;UBERON:0004871!2.05e-08!8;UBERON:0004923!1.15e-07!57;UBERON:0005172!3.19e-07!55;UBERON:0005173!3.19e-07!55;UBERON:0000489!7.04e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;2.14e-32;10!UBERON:0000158;2.14e-32;10!UBERON:0000478;2.85e-32;24!UBERON:0000305;3.69e-24;7!UBERON:0001987;2.28e-16;4!UBERON:0002037;1.22e-10;6!UBERON:0003124;5.61e-10;3!UBERON:0000920;5.61e-10;3!UBERON:0001242;1.37e-07;4!UBERON:0001262;1.37e-07;4!UBERON:0004786;1.37e-07;4!UBERON:0004808;1.37e-07;4!UBERON:0001277;1.37e-07;4!UBERON:0002680;3.01e-07;9!UBERON:0001895;3.01e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,4.25e-47,14;UBERON:0000158,4.25e-47,14;UBERON:0000478,2.72e-32,24;UBERON:0003124,1.59e-24,7;UBERON:0000305,3.43e-24,7;UBERON:0004871,3.74e-21,8;UBERON:0001987,2.22e-16,4;UBERON:0004340,2.22e-16,4;UBERON:0004923,1.40e-12,66;UBERON:0002037,1.26e-10,6;UBERON:0006215,1.26e-10,6;UBERON:0000920,5.49e-10,3;UBERON:0006554,3.80e-08,47;UBERON:0001008,5.93e-08,48;UBERON:0001242,1.39e-07,4;UBERON:0001262,1.39e-07,4;UBERON:0004786,1.39e-07,4;UBERON:0004808,1.39e-07,4;UBERON:0001277,1.39e-07,4;UBERON:0002680,3.08e-07,9;UBERON:0001895,3.08e-07,9;UBERON:0010092,3.08e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,17.4753097704138,5.80287352102598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.67356066463832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.75942385747893,24.9653159265746,24.1912234663744,0,0,0,0,0,0,0,0,0,0,0,0,7.00984807631409,0,0,0,0,0,0.451199612907412,0.0770153371044148,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.188287601553558,0,0,0.443430153536676,1.1486170010348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.5047573284584,4.45447021248958,2.76444631889309,0,0,0,0,0,0,0,0.755798243562828,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,1.5625665665114,0,5.07499702804355,0,0,0.236387681767936,0,0,0,0,0,3.05163472634166,5.52896299656123,4.72876190325676,0.658156191461918,0,0,0,0,0,0,0.108647371922008,8.29403015302991,0.457987967009312,3.19820865611181,0,0,0,0,0,0,0,0,0.632994193584081,1.14262965711403,3.1097675715467,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,1.20990716048664,0.30607276163049,0,0,0,0,0,0,0,0.569219092059585,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0,3.91102765469606,0,0,0.19980960958213,0.144090417154106,0,0.343189995723929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0,1.16495949527454,0.236349546921671,0.0824158583811665,0.202210631562555,0.688992370603241,0,0,0,0.160753148465019,0,0,0,0,0,0,11.3480218510845,2.46536564234491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53978154095896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,36.8987786766643,0.690860683462397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0.161475645631851,0,0,0,0.183428598521679,0,0,0,0,0,0,0.781514011233092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354809480650555,0,0,0.0679697329768317,0,0,0.111231401892069,0,0,0,0.913158720509496,9.28488642240072,0.47775168788705,0.285906176706625,0,0,0,0,0,0,0,0,0,0,0,15.1210533239073,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0,0,0,0,0.392616934229891,0,0.4226557275834,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0,0,0,0.253397002022874,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0,2.34640942403454,0.122241444182866,0,0,0,0 | |||
|short_description=p3@PDZK1 | |||
}} |
Latest revision as of 18:56, 16 September 2015
Short description: | p3@PDZK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PDZK1_5end |
Coexpression cluster: | C2520_mesothelioma_Placental_Amniotic_serous_kidney_renal_amniotic |
Association with transcript: | -100bp_to_NM_001201325, NM_001201326, NM_002614_5end |
EntrezGene: | PDZK1 |
HGNC: | 8821 |
UniProt: | Q5T2W1B4DPB9E7EU02 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 2.86e-34 | 19 |
placental epithelial cell | 1.20e-21 | 3 |
amniotic epithelial cell | 6.45e-15 | 2 |
amnion mesenchymal stem cell | 1.06e-12 | 5 |
chorionic membrane mesenchymal stem cell | 5.49e-10 | 3 |
intestinal epithelial cell | 1.39e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 4.25e-47 | 14 |
membranous layer | 4.25e-47 | 14 |
extraembryonic structure | 2.72e-32 | 24 |
chorion | 1.59e-24 | 7 |
amnion | 3.43e-24 | 7 |
somatic layer of lateral plate mesoderm | 3.74e-21 | 8 |
placenta | 2.22e-16 | 4 |
allantois | 2.22e-16 | 4 |
organ component layer | 1.40e-12 | 66 |
cerebellum | 1.26e-10 | 6 |
rhombic lip | 1.26e-10 | 6 |
egg chorion | 5.49e-10 | 3 |
urinary system structure | 3.80e-08 | 47 |
renal system | 5.93e-08 | 48 |
intestinal mucosa | 1.39e-07 | 4 |
wall of intestine | 1.39e-07 | 4 |
gastrointestinal system mucosa | 1.39e-07 | 4 |
gastrointestinal system epithelium | 1.39e-07 | 4 |
intestinal epithelium | 1.39e-07 | 4 |
regional part of metencephalon | 3.08e-07 | 9 |
metencephalon | 3.08e-07 | 9 |
future metencephalon | 3.08e-07 | 9 |