FFCP PHASE1:Hg19::chr4:174254823..174254862,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3148 | |EntrezGene=3148 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5000 | |HGNC=5000 | ||
|TSSclassifier=strong | |||
|UniProt=P26583 | |UniProt=P26583 | ||
|association_with_transcript=0bp_to_ENST00000438704_5end | |association_with_transcript=0bp_to_ENST00000438704_5end | ||
|cluster_id=chr4:174254823..174254862,- | |||
|description=CAGE_peak_5_at_HMGB2_5end | |description=CAGE_peak_5_at_HMGB2_5end | ||
|id=chr4:174254823..174254862,- | |id=chr4:174254823..174254862,- | ||
|ontology_enrichment_celltype=CL:0000084!7.32e-08!25;CL:0000827!7.32e-08!25;CL:0000542!1.83e-07!53;CL:0000051!1.83e-07!53;CL:0000838!5.21e-07!52;CL:0000095!5.65e-07!17;CL:0000123!5.65e-07!17 | |ontology_enrichment_celltype=CL:0000084!7.32e-08!25;CL:0000827!7.32e-08!25;CL:0000542!1.83e-07!53;CL:0000051!1.83e-07!53;CL:0000838!5.21e-07!52;CL:0000095!5.65e-07!17;CL:0000123!5.65e-07!17 | ||
|ontology_enrichment_celltype_v019=CL:0000095;3.07e-09;17!CL:0002319;2.24e-08;25 | |ontology_enrichment_celltype_v019=CL:0000095;3.07e-09;17!CL:0002319;2.24e-08;25 | ||
|ontology_enrichment_celltype_v019_2=CL:0000095,1.69e-09,17;CL:0000123,1.69e-09,17;CL:0002319,1.33e-08,25;CL:0000542,1.52e-07,53;CL:0000051,1.52e-07,53;CL:0000243,6.01e-07,15;CL:0000125,6.01e-07,15;CL:0000030,6.01e-07,15;CL:0000339,6.01e-07,15;CL:0000838,9.16e-07,52 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:2531!3.05e-12!51;DOID:0060083!3.05e-12!51;DOID:1240!9.89e-11!39 | |ontology_enrichment_disease=DOID:2531!3.05e-12!51;DOID:0060083!3.05e-12!51;DOID:1240!9.89e-11!39 | ||
|ontology_enrichment_disease_v019=DOID:2531;9.31e-07;51!DOID:0060083;9.31e-07;51 | |ontology_enrichment_disease_v019=DOID:2531;9.31e-07;51!DOID:0060083;9.31e-07;51 | ||
|ontology_enrichment_disease_v019_2=DOID:2531,1.74e-09,51;DOID:0060083,1.74e-09,51;DOID:1240,1.97e-08,39 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.655324116390517,0.263766978228454,0.495065411840187,0.331397375727916,0,0,0,0,1.72369481307503,0.612002073732759,0.626909442956176,2.86235987131057,2.05311637609326,1.12988375635323,1.22261449196722,1.23150884174919,0.708397031823113,0.786728553697808,0,0.309632246632152,0,0,0,4.6480320348181,0.142169232487422,1.17440175733939,0.553995408531877,1.00272223735071,0.217010870715852,0,0,0.257575567634187,0.290796477559129,0,0.242584061187816,0.232429036905685,0,0,0.28769239232215,0,0,0.344745680736619,0.645484683583826,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0.336985893439485,0.750884464207532,0.32145117339416,0,0.39783335439818,0.547992461293902,0,0.546138611262131,0.889509253863555,0,0,0.574752439954483,0,0,0,0,0,1.32171328579026,0,3.16060901730092,0.590129310341499,0.786021525498329,0.205601498999509,0.501559486172034,0,0,0,1.33692548262208,1.17842362989935,0.886135578334485,0.541607727530031,1.79327847615945,1.43065282315866,1.80881695064044,1.10540007114339,0.869409257205157,0.889719378972363,0,0,2.15287751125376,0.383220493601921,1.03088233644789,1.26509846009751,1.27426165729639,1.30216690771284,0.950452044448374,0.903450714466637,0.76791966692651,2.49861453104692,0.473554504088034,1.64225599384209,0.80642697289893,0.534880391567015,0.434473211648397,0,0,0,0.361439152384566,0,0.144846518960824,0.795285947051099,0,1.03988298880475,0.886917589850256,0.43917392846563,0.261958150995425,0,0,0,0.174129737299267,0.132957960518865,0.476981248610684,0.571994910780128,0.371457501329565,0.596287222100115,0.860234595106124,0.694281003215189,0,0,0.550236083880135,0,0.516833518338658,0.71153252537342,0.66944122552934,0,0.760272105718513,0.976248230192678,0.367663080345869,0,1.51809538082936,2.69435247151404,2.0270066486998,0,0.949265659568129,0.366403487860815,0,0,0,0,0.506522046658319,0,0.286836620748814,1.41867352879343,0,0,0.24666754841716,0.622422070799533,0.269421344139376,0.817309515567294,0,0,0.234321431833797,0.312160076830321,0,0.149448680551801,0.939475989150119,0.971237666208789,0.280901613404497,0,0.982674538494144,0.206651562351531,0,0.247266929278557,0,0,1.68336113954066,1.12606667884768,0,0.438977620880838,0.612975591598039,0.150238058906597,0.680593098960126,0,0,0,0.900273288253207,0.206105058476878,0,0.18611685633159,0.843881661206331,0.487185025805993,0.504867548488229,0.184099797284599,0.646584227275248,0,0.403008392910561,0.169560592310488,0,0,0,0.243947412259191,0.265059536642971,0.116193942869518,0,0.252320850875628,0,0,0,0,0,0.721879481669586,0.354920400119532,0.168584690078102,0,0.110293972732394,0.435758888184812,0,0.269662616320329,0,0.38474715694639,0,0,0,0,0,0,0,1.7658523976586,0.122988438543114,0,0,0,0,0.0925884451585296,0.325808305310325,0,1.44331342025273,0.463721619900307,0.117408694235822,0,1.85194205030644,0.951270761172991,0,0,0.246217006087397,0,0.445893486866185,0,0,0,0.179117045405697,0.290633938513962,0.383382679165211,5.91195885475132,1.58487181223807,0.207328115540772,0.432359860250884,0.12624243342638,0.571481048629521,0,0,0,0.411309970813294,0,0,0.560655421726804,0.43596006883328,1.10007428731425,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42636905040718,0.289562613335158,0,0.179060963239896,2.80212859983818,1.77327684181734,0.215627574859517,0.256686072559497,0.254094624222463,3.90419561572865,0,0.670065061337395,2.55175500661265,0,0,0.414415513436035,0,0,0.542530047399471,0,0.178428988797162,0,0.35142424497814,0.300946099727719,0,0,0,0.553107505625109,0.60818530127658,0.195801157462741,0.343143423810856,1.03384013061444,0,0.320182673410333,0.606255142892519,0,0.604780586659361,0.248107807818777,0,0,0,0,0.321707842287215,0,0.154209693802656,0.177561725313127,0.574890092096664,0,0.813472649219715,0.362578348774867,0,0,0.34444334449382,0.182091168006717,0,0,0.15403067420883,0,0,0.105551628892876,3.4120015221269,1.19065593693561,0.431831832204279,0,0.270946437543853,0,0.254876273045038,0,0.447749509444357,13.374852475402,11.5031598450956,0,0,0,0.412164046590889,1.46511143709349,1.73269949833235,0,0,0,0.386682873168488,0.770243085573222,0.15350367472613,0.413509717453592,0.107420244868274,0,0.255679882248303,0.0890320356467374,0,0,0.255225424989168,0,0.464845549297286,0,0,0,0,0,0,0.143124886741991,0,0.316379424718726,0,0.255897791311334,0,0.318203247925937,0.78494864019923,0.179872457583315,0,0.117812402345686,0.202182481573316,0,0,0,0,0,0.818999468447914,0.141405431953713,0,0.551365343546124,0,0,0,0,0,0.30982349809975,0.563391205064483,0.143411352204052,0,0,0,0.422215270595328,0,1.13841952129715,1.04980416073495,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0.476463550915578,0.411362273086194,0,0.540031437238115,0.79312517629427,0.213648142254946,0,1.47024129588619,4.08766985276581,1.298422916788,6.18934037131203,4.46393563640703,0.399158742865633,0.957526850661834,0.635020748171649,0,1.96558024679421,0.912938716132769,0.94007937463814,2.50634477090067,0.846458889008016,1.2847046008296,1.4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| ||
|short_description=p5@HMGB2 | |short_description=p5@HMGB2 | ||
}} | }} |
Latest revision as of 19:06, 16 September 2015
Short description: | p5@HMGB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_HMGB2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000438704_5end |
EntrezGene: | HMGB2 |
HGNC: | 5000 |
UniProt: | P26583 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron associated cell | 1.69e-09 | 17 |
neuron associated cell (sensu Vertebrata) | 1.69e-09 | 17 |
neural cell | 1.33e-08 | 25 |
lymphocyte | 1.52e-07 | 53 |
common lymphoid progenitor | 1.52e-07 | 53 |
glial cell (sensu Vertebrata) | 6.01e-07 | 15 |
glial cell | 6.01e-07 | 15 |
glioblast | 6.01e-07 | 15 |
glioblast (sensu Vertebrata) | 6.01e-07 | 15 |
lymphoid lineage restricted progenitor cell | 9.16e-07 | 52 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.74e-09 | 51 |
immune system cancer | 1.74e-09 | 51 |
leukemia | 1.97e-08 | 39 |