FFCP PHASE1:Hg19::chr11:131781290..131781355,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=50863 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17941 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000425719,ENST00000479431_5end | |||
|cluster_id=chr11:131781290..131781355,+ | |||
|coexpression_cluster_id=C2112 | |||
|description=CAGE_peak_2_at_NTM_5end | |||
|id=chr11:131781290..131781355,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.84e-32!180;CL:0000057!1.47e-17!75;CL:0000680!6.39e-16!57;CL:0000056!6.39e-16!57;CL:0000355!6.39e-16!57;CL:0000359!3.64e-15!32;CL:0000183!5.59e-15!59;CL:0000187!8.26e-15!54;CL:0000192!4.87e-14!42;CL:0000514!4.87e-14!42;CL:0000393!3.05e-12!60;CL:0000211!3.05e-12!60;CL:0000220!1.67e-07!246;CL:0002321!1.74e-07!248;CL:0002620!6.48e-07!23;CL:0002539!7.59e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000359;3.06e-17;32!CL:0000192;6.30e-12;43!CL:0002539;6.09e-08;10!CL:0000057;9.00e-08;73!CL:0002620;4.58e-07;23!CL:0000187;5.01e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.39e-18,76;CL:0000359,4.55e-18,32;CL:0000192,1.61e-16,43;CL:0000514,1.61e-16,43;CL:0000680,1.33e-15,58;CL:0000056,1.33e-15,58;CL:0000355,1.33e-15,58;CL:0000187,2.56e-14,55;CL:0000393,1.90e-11,61;CL:0000211,1.90e-11,61;CL:0002539,5.58e-08,10;CL:0002321,2.22e-07,250;CL:0002620,4.60e-07,23 | |||
|ontology_enrichment_development_v019=CL:0000514;6.30e-12;43!CL:0000355;8.29e-08;58 | |||
|ontology_enrichment_disease=DOID:2394!3.48e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;7.26e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,7.82e-10,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!3.93e-23!83;UBERON:0002329!3.93e-23!83;UBERON:0003077!3.93e-23!83;UBERON:0003059!3.93e-23!83;UBERON:0007282!3.93e-23!83;UBERON:0009618!3.93e-23!83;UBERON:0007285!3.93e-23!83;UBERON:0000475!8.96e-23!365;UBERON:0000119!4.14e-21!312;UBERON:0000486!2.55e-20!82;UBERON:0000483!4.86e-20!309;UBERON:0004290!3.53e-18!70;UBERON:0000481!3.57e-17!347;UBERON:0001134!1.94e-15!61;UBERON:0002036!1.94e-15!61;UBERON:0003082!1.94e-15!61;UBERON:0002385!2.67e-15!63;UBERON:0001015!2.67e-15!63;UBERON:0000383!2.67e-15!63;UBERON:0005256!2.20e-14!143;UBERON:0000033!5.03e-14!123;UBERON:0000924!6.73e-13!173;UBERON:0006601!6.73e-13!173;UBERON:0000468!7.22e-13!659;UBERON:0000153!7.65e-13!129;UBERON:0007811!7.65e-13!129;UBERON:0004121!2.98e-12!169;UBERON:0004872!3.28e-12!84;UBERON:0000467!6.08e-12!625;UBERON:0001637!7.50e-12!42;UBERON:0003509!7.50e-12!42;UBERON:0004572!7.50e-12!42;UBERON:0000480!9.28e-12!626;UBERON:0000477!9.45e-12!286;UBERON:0003102!2.03e-11!95;UBERON:0001981!1.09e-10!60;UBERON:0007500!1.09e-10!60;UBERON:0004537!1.09e-10!60;UBERON:0006965!1.09e-10!60;UBERON:0002049!1.40e-10!79;UBERON:0007798!1.40e-10!79;UBERON:0004111!1.41e-10!241;UBERON:0000025!6.59e-10!194;UBERON:0004573!1.15e-09!33;UBERON:0004571!1.15e-09!33;UBERON:0002050!1.47e-09!605;UBERON:0005423!1.47e-09!605;UBERON:0000923!1.87e-09!604;UBERON:0005291!1.87e-09!604;UBERON:0006598!1.87e-09!604;UBERON:0002532!1.87e-09!604;UBERON:0000922!1.94e-09!612;UBERON:0000479!7.10e-09!787;UBERON:0002097!1.19e-08!40;UBERON:0000055!1.35e-08!69;UBERON:0002346!1.84e-08!90;UBERON:0002199!3.95e-08!45;UBERON:0002416!3.95e-08!45;UBERON:0003075!7.34e-08!86;UBERON:0007284!7.34e-08!86;UBERON:0004535!1.01e-07!110;UBERON:0003914!1.25e-07!118;UBERON:0001009!1.46e-07!113;UBERON:0000490!2.29e-07!138;UBERON:0002100!5.14e-07!216;UBERON:0002616!7.10e-07!59;UBERON:0003129!7.29e-07!11;UBERON:0004237!7.59e-07!10;UBERON:0004695!7.59e-07!10;UBERON:0002111!7.59e-07!10;UBERON:0004178!7.59e-07!10;UBERON:0000955!7.68e-07!69;UBERON:0006238!7.68e-07!69;UBERON:0001135!7.70e-07!15;UBERON:0000064!9.17e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;2.58e-09;33!UBERON:0004571;2.58e-09;33!UBERON:0001637;1.81e-08;42!UBERON:0003509;1.81e-08;42!UBERON:0004572;1.81e-08;42!UBERON:0011137;5.62e-08;11!UBERON:0010323;5.62e-08;11!UBERON:0004237;6.09e-08;10!UBERON:0004695;6.09e-08;10!UBERON:0002111;6.09e-08;10!UBERON:0004178;6.09e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000486,3.62e-20,83;UBERON:0007524,5.51e-18,73;UBERON:0003077,2.18e-17,72;UBERON:0007285,2.18e-17,72;UBERON:0002329,4.22e-17,71;UBERON:0003059,4.22e-17,71;UBERON:0007282,4.22e-17,71;UBERON:0004290,4.22e-17,71;UBERON:0009618,4.22e-17,71;UBERON:0000119,1.06e-15,309;UBERON:0000483,1.11e-14,306;UBERON:0007503,1.59e-14,78;UBERON:0001134,1.94e-14,62;UBERON:0002036,1.94e-14,62;UBERON:0003082,1.94e-14,62;UBERON:0002385,1.78e-13,64;UBERON:0001015,1.78e-13,64;UBERON:0000383,1.78e-13,64;UBERON:0001637,1.25e-12,42;UBERON:0003509,1.25e-12,42;UBERON:0004572,1.25e-12,42;UBERON:0003102,5.29e-12,99;UBERON:0010314,2.64e-11,132;UBERON:0004573,3.06e-10,33;UBERON:0004571,3.06e-10,33;UBERON:0004872,3.67e-10,83;UBERON:0007500,2.77e-09,59;UBERON:0001981,2.77e-09,59;UBERON:0004537,2.77e-09,59;UBERON:0006965,2.77e-09,59;UBERON:0004121,4.19e-09,171;UBERON:0000924,4.19e-09,171;UBERON:0006601,4.19e-09,171;UBERON:0002049,6.70e-09,78;UBERON:0007798,6.70e-09,78;UBERON:0002097,1.38e-08,41;UBERON:0002199,1.83e-08,46;UBERON:0002416,1.83e-08,46;UBERON:0010371,4.91e-08,104;UBERON:0010323,5.31e-08,11;UBERON:0004237,5.58e-08,10;UBERON:0004695,5.58e-08,10;UBERON:0002111,5.58e-08,10;UBERON:0004178,5.58e-08,10;UBERON:0000490,6.72e-08,148;UBERON:0005256,5.32e-07,122;UBERON:0000055,6.34e-07,68;UBERON:0000479,6.76e-07,773;UBERON:0001135,9.32e-07,15 | |||
|phase1_expression=0.363356758541113,0,0.140954404095971,0,0.446961094427288,0.872338524100369,0,0,0,1.96587149201207,0,8.30077214094655,21.6288922147332,0.247532705920093,0.331397375727916,10.0848771967766,15.0673632005994,17.527442169297,21.9569759455728,3.20114750999649,7.54802557603736,0.940364164434263,1.14494394852423,4.65373045247806,1.25542639594803,0,0,0,0,0,0.309632246632152,5.51652734687356,4.51808878167375,2.9580320813343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0.639312809217652,1.44575660953827,0.50133791063589,0.579386075843295,5.5670016293577,2.43317435151318,7.37371573879729,11.0864698731282,10.5401742831751,0.392937226493138,6.19301990097322,4.82019775619758,0,0,0,0,0,0,0.993812036833525,0,0,0,0,0.275118041940067,1.67195973229448,0.258416759169329,0.35576626268671,0,0,0,0,0.735326160691737,0,0.17859945656816,0,0.112611480483322,1.53316637465883,1.89853131913626,0.916008719652036,0,0,4.36094052142534,11.9273268406876,5.19185097824777,3.04541115870403,32.412538144616,7.80270440836386,6.16745360156538,3.20246987189115,3.20667812942308,0.311211035399766,1.34710672069688,0.817309515567294,3.02714855289863,0,1.87457145467037,3.74592092196385,2.2818872861778,1.94283284717341,2.93586246609412,0.647491777472526,1.68540968042698,6.32877930890169,11.3007571926827,3.92637968467909,13.0680314301026,10.1379441004208,0.910161361938026,1.43723628363248,5.72342787443825,5.75545191411035,14.1302698896933,7.02364193409341,11.0335606487647,15.3242820084729,2.49550802952046,12.1984952268426,2.77624605464138,0.847727604638247,9.00273288253207,3.7098910525838,5.66809188100384,3.16398655763703,13.33333024706,5.65134629934952,1.26216887122057,1.19664868234989,1.13152239773168,13.4903645156313,6.34738218834134,2.03472710772585,6.95739071387869,8.45512973831587,7.4569194801141,0.121973706129595,0.132529768321485,0,0,0,0,12.5159625863853,6.43240938192885,12.4321429217232,0.464367928031979,0.721879481669586,0,0,0,0,0,0.237270619111097,0,0,0,0,9.81692416624121,0.4115740113314,2.94017422771084,0,0,0,0,0,11.3234754797027,2.74375713521564,8.99214026060957,2.71428225511403,7.12931027720678,0.325808305310325,0,7.21656710126366,4.9850074139283,28.295495310833,0,0,0,0,0,0,0,0,2.81201501960331,11.0868204611247,8.93183112627035,2.86587272649115,2.03443756959773,7.28427090413901,0,0,0,0,0.12624243342638,0.317489471460845,1.90994212779139,0,0,2.87916979569306,0.300343057843917,0.857479297891735,7.62491373548453,6.5394010324992,3.9602674343313,12.6686281442622,0,4.22651376278,0.797814349754612,0,0.257207374262142,0,2.1313774321288,0.142977993658148,0,0.823240336780769,1.95441710576241,0.355391948742546,1.58390374586686,0,1.74306691720059,0.399891964728228,0,0,0,2.15662369942424,0,27.1010119577365,5.79125226670317,2.26023954805422,8.41586527227509,0,0,0,0,1.01637849688985,1.30139853857622,0,0.837581326671744,0,0,0,0,0,0,1.08506009479894,1.45579603071565,4.63915370872621,4.41566762095017,2.45996971484698,6.01892199455438,9.09630016223939,1.03473071292505,5.97803038681893,4.60922921354258,7.21134000085088,1.17480694477644,1.71571711905428,0,0,0,0.606255142892519,8.32177197552485,6.35019615992329,4.21783273291921,2.91577749247319,3.08726103876381,1.28139149255701,0.511707249066704,4.98647155545183,0,10.7946785661859,18.6439811578783,5.4203922969114,15.058378446325,13.0155623875154,0,6.01519410909855,1.19705285616665,1.49258782613989,1.45672934405374,1.57349297951309,7.670393419426,1.77135275340154,1.56869953835371,2.92278449306521,0.844413031143006,0,0.170093705276516,0.863663664408557,0,2.16757150035082,0.501689773854853,0.254876273045038,1.66215201785745,3.80587083027703,0,0,0.512900250232778,0.656029291399411,0.325378394664303,0,0,0,6.89118645595407,4.55042172225565,6.42735719376638,10.6337790121334,0.616194468458578,0.460511024178389,2.61889487720608,0.644521469209642,0.870100163485371,0.767039646744908,2.93805717634233,4.95854746082934,6.1500821556834,14.1650110868988,1.0115778085555,3.71876439437829,63.5920940597893,16.0318572136938,1.54016790088044,2.66153015158511,13.0489948811261,21.1269609778469,5.86812035642164,1.116475108079,6.01120906965579,1.14378116354295,0,0.42793898803392,4.45484547096312,1.56989728039846,2.51821440616641,1.64722217841633,2.47406044925942,4.04364963146632,1.58510321173008,6.31887684358472,0,13.1605284400894,12.6780176108107,2.04749867111979,2.54529777516683,13.5609739944291,2.2054613741845,4.64407282668854,5.69986150829892,1.15755106853338,0,8.92805658635898,10.2241754372918,12.1129109088864,5.30622003154991,2.25972794330179,10.7001315444375,7.44998234548255,6.12212142363226,6.91519275215794,0,0.349934720244983,6.06199310170726,3.35151137767894,2.17781969722645,0.0941438007767792,7.74909670808214,8.42357378338128,2.21715076768338,12.1753402109689,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593929361665277,0,0.994147647766298,2.11004124615769,15.2492925881381,0,0,0.597743964753209,1.38141957765574,0,4.90889676010343,0,5.90975216557434,0,0,0,0.394573622547734,0,0,0.969332746095218,1.39152147242777,1.99613798001194,0,0,0,0,0,0,0,0.583209226766509,0,0.885741385813839,0.120596438625408,9.15490417902499,13.1589319318157,10.9352619012813,2.85201016300164,0,0,0.0769502585037971,0.113942055847001,0,0,0,0,2.65633020865401,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.442287822516696,0.611030144933625,0,0,0,0.67401132980677,0.802577647298789,2.10838001152805,0,0,0,0.394584402849391,1.20990716048664,1.83643656978294,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.581934098930517,0,2.25980740780532,14.5264440125556,20.268890393705,3.16553979779394,0,0.400794101257669,0.85381197895741,0,0,0,0,0,0,0,1.9026588850306,0.836822770498666,0.101998217636322,0,0.600420288709789,0.136905378891993,0,0,0,1.67569440763353,0.687481272035051,0.717873024576814,0,0.429226048136571,1.11585728720936,0.671834724867263,10.0883967391873,0,0,0,0,0,0,0.795229689809303,1.22583065500418,0,0.137539436597234,0,0,0,3.28047605953333,0,0,3.93409411012486,0,0,0,1.42939065274673,0,0,4.3439968140297,5.18532894720761,4.89881040164114,0,0,1.36310417428337,0,0,0,0.387848869084652,0.26446520348538,0,0,0,1.57204305099666,0,0,0,0,0,0,0,0.306345576763462,0.327872630709804,0,5.31640907980192,2.3184990331373,1.3771002377715,0,1.44207766997908,1.05563885000352,0,2.24964734331792,0,0.285465333544967,0,0,0,10.8956006107418,18.4633514779307,11.0961172300523,8.7125382426541,3.52195062453605,3.55924488638614,13.2727239670216,7.25908434063547,10.7251668402119,9.75843989931584,16.7261605521888,23.3897618325074,18.6315548251511,14.9294234822708,34.5594228925393,27.6524882760219,3.45592500693602,9.90093551638868,10.1717683301165,1.27294061441792,16.4338152275007,19.4894179148967,12.3409725496571,9.20063858725253,5.83772698810748,4.71449284272287,16.4040367697246,0,0,0,0,1.62065732026684,0,0,0,0,13.0749967999952,0,0,0,0,0,1.10606748921385,0,0,0.163565394255844,0,0,0,0,0,0,0,8.46887371158467,0.279759015438889,1.24415452006595,0,0,0,0.109209638192014,1.18812770967818,0.637724760305049,2.85052257795705,0,3.18004350653419,0,0,10.2276023670298,3.062454773532,2.376481328569,0,1.27707087245721,2.66651273512982,2.7727886584389,3.18123361335402,2.42213468447777,0,0,0,0,0,2.288292572803,0,0,0.0752103283492573,0.60511520611056,0,0,0.982631505060581,0,2.76904096935418,2.34323429584154,2.48024155801421,2.15613754659283,2.18789923607288,0,0.992422356778588,3.69329613155203,0,0.535701835878287,0.336283722218824,0,0,0,0,0,0.679697329768317,2.49936539538827,0,0,0.470958557103084,0.628462359664008,0,0.913158720509496,0.863710364874486,0,1.21510125100316,0,0,0,0,0.207216164163037,0.51215543128185,0,0.430227358820278,10.7682120664814,12.2707302853187,0.846774100381858,0,0.31020638566432,0,0,0,0,0,0.205325613712494,4.6392577253528,1.94284397223656,0,0,0,0,0,0,0.308696632431779,0.655678681511872,0,0.735444965261716,0,0,0,1.6906229103336,9.0061370784543,0,0,0,0,1.41157948686277,0,0.730336388246517,0,0.286679166302903,0,2.37970215668201,1.74540276136151,0.5290268405154,11.1598505450025,0.924351257262837,8.21990468035199,0.378499274505237,0,0.126698501011437,0,0,0,0,0.0757786982182394,0,2.48750831837634,0.310298987585686,1.49263787330687,1.1903221573187,0,0,15.362065173544,0.0636471582781649,0.404234377916439,0.435433495793923,0.684466602170562,0.202056159043763,0.286888821570705,1.33064142618405,0,0,0,0,2.34640942403454,0.488965776731466,0.813792356631477,0.665756774185513,0.603821380773079,0 | |||
|short_description=p2@NTM | |||
}} |
Latest revision as of 19:07, 16 September 2015
Short description: | p2@NTM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NTM_5end |
Coexpression cluster: | C2112_Smooth_Amniotic_mesenchymal_Myoblast_Fibroblast_Lens_cerebellum |
Association with transcript: | 0bp_to_ENST00000425719, ENST00000479431_5end |
EntrezGene: | NTM |
HGNC: | 17941 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.39e-18 | 76 |
vascular associated smooth muscle cell | 4.55e-18 | 32 |
smooth muscle cell | 1.61e-16 | 43 |
smooth muscle myoblast | 1.61e-16 | 43 |
muscle precursor cell | 1.33e-15 | 58 |
myoblast | 1.33e-15 | 58 |
multi-potent skeletal muscle stem cell | 1.33e-15 | 58 |
muscle cell | 2.56e-14 | 55 |
electrically responsive cell | 1.90e-11 | 61 |
electrically active cell | 1.90e-11 | 61 |
aortic smooth muscle cell | 5.58e-08 | 10 |
embryonic cell | 2.22e-07 | 250 |
skin fibroblast | 4.60e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 7.82e-10 | 14 |