FFCP PHASE1:Hg19::chr1:243417762..243417788,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:243417762..243417788,- to FFCP PHASE1:Hg19::chr1:243417762..243417788,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9859 | |EntrezGene=9859 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28920 | |HGNC=28920 | ||
|TSSclassifier=strong | |||
|UniProt=E5RFU8 | |UniProt=E5RFU8 | ||
|association_with_transcript=0bp_to_ENST00000522191_5end | |||
|cluster_id=chr1:243417762..243417788,- | |||
|description=CAGE_peak_13_at_CEP170_5end | |||
|id=chr1:243417762..243417788,- | |||
|ontology_enrichment_celltype=CL:0002194!5.32e-21!63;CL:0000576!5.32e-21!63;CL:0000040!5.32e-21!63;CL:0000559!5.32e-21!63;CL:0002009!6.24e-21!65;CL:0000557!1.02e-20!71;CL:0000766!3.49e-20!76;CL:0000839!8.10e-20!70;CL:0002057!1.47e-18!42;CL:0000860!3.39e-18!45;CL:0000763!2.69e-14!112;CL:0000049!2.69e-14!112;CL:0000048!4.42e-10!430;CL:0000723!1.95e-09!436;CL:0000034!2.29e-09!444;CL:0002334!3.99e-07!12;CL:0000134!8.15e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.89e-17;33!CL:0002057;2.89e-17;33!CL:0000473;1.72e-15;39!CL:0000234;1.72e-15;39!CL:0000576;2.06e-10;48!CL:0002582;1.13e-09;3!CL:0002334;7.21e-08;12!CL:0000766;1.10e-07;69!CL:1000306;9.73e-07;4!CL:0002547;9.73e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,5.27e-23,48;CL:0000234,5.27e-23,48;CL:0000860,4.62e-20,42;CL:0002057,4.62e-20,42;CL:0002009,4.05e-18,61;CL:0000557,1.78e-17,67;CL:0002194,3.89e-17,59;CL:0000576,3.89e-17,59;CL:0000040,3.89e-17,59;CL:0000559,3.89e-17,59;CL:0000839,1.06e-14,66;CL:0000766,2.48e-14,72;CL:0002582,1.05e-09,3;CL:0000034,1.97e-09,441;CL:0000763,2.22e-09,108;CL:0000049,2.22e-09,108;CL:0000048,4.79e-09,427;CL:0000723,1.01e-08,433;CL:0002334,7.40e-08,12;CL:1000306,7.92e-07,4;CL:0002547,7.92e-07,4;CL:0002087,8.32e-07,115 | |||
|ontology_enrichment_development_v019=CL:0002057;5.40e-15;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.83e-17!80;UBERON:0002204!2.19e-16!167;UBERON:0001474!3.47e-15!86;UBERON:0004765!2.68e-13!101;UBERON:0001434!2.68e-13!101;UBERON:0002390!6.93e-13!102;UBERON:0003061!6.93e-13!102;UBERON:0002193!2.25e-11!112;UBERON:0003081!2.29e-10!216;UBERON:0002405!2.69e-09!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0004797;9.73e-07;4!UBERON:0000415;9.73e-07;4!UBERON:0007240;9.73e-07;4!UBERON:0005742;9.73e-07;4!UBERON:0005734;9.73e-07;4!UBERON:0004664;9.73e-07;4!UBERON:0004663;9.73e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.01e-16,76;UBERON:0001474,1.86e-14,82;UBERON:0002390,2.86e-13,98;UBERON:0003061,2.86e-13,98;UBERON:0003081,1.12e-12,203;UBERON:0004765,1.37e-12,90;UBERON:0002204,1.57e-12,167;UBERON:0000926,2.47e-12,315;UBERON:0004120,2.47e-12,315;UBERON:0006603,2.47e-12,315;UBERON:0002405,5.65e-12,93;UBERON:0002193,2.15e-11,108;UBERON:0001434,1.09e-10,100;UBERON:0004573,1.76e-07,33;UBERON:0004571,1.76e-07,33;UBERON:0000415,7.92e-07,4;UBERON:0007240,7.92e-07,4;UBERON:0005742,7.92e-07,4;UBERON:0005734,7.92e-07,4;UBERON:0004664,7.92e-07,4;UBERON:0004663,7.92e-07,4 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0.331397375727916,0,0.602694528023977,1.46062018077475,0,0,0,0,0,0,0,0.0764134057479513,0,0.0787107813136792,0.393364276848904,0.383829398097213,0.619264493264304,0,0,0,0,0,0,3.87796785972314,4.41197784434312,1.30206522429511,0.895661896959697,0.32389366601898,0.515151135268373,1.16318591023652,1.13362783106643,0.970336244751265,1.62700325833979,0,0.619412741790207,0.575384784644301,1.5369642391746,1.18241114944293,0.689491361473237,0.645484683583826,0,1.31769637679823,1.63743690034707,0.674170453335254,1.83650335422542,1.92557416245656,1.91801137739712,0.989553900560148,0.797854630486527,0.852449501065388,3.48251086354301,2.26954089876456,0.622822248995575,1.00499466102697,0.521482918420201,1.52032191293582,3.02699751316684,4.05105399586321,1.89877432464531,0.633765858935825,0.425208599930087,0.838634582033504,0.44931452458598,0.300353785683013,0.32145117339416,0.285012743741249,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,1.32171328579026,1.12101712596307,0.263384084775077,0,0,0.205601498999509,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0.296573126324121,0.267540828089713,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0.670700859703636,0.255725123687061,0,0,0,0,0.486634870302636,0.0945348171640679,0,0.087834785693126,0.130979075497713,0,0,0.649094787309367,0.870648686496336,0.398873881556595,0.238490624305342,0,0,0,0,0,0,0,0.275118041940067,0.208994966536811,0,0.35576626268671,0,0,0,0,0.735326160691737,0,0.17859945656816,0.22452937262617,0.225222960966644,0,0,0.366403487860815,1.31780417436063,0,0,0.496971951695318,1.51956613997496,2.25095607382472,2.58152958673932,0.709336764396714,0,0,0,0.622422070799533,0.404132016209064,0,0,0,0.70296429550139,0.312160076830321,0,0.149448680551801,1.17434498643765,1.61872944368132,0.561803226808994,0,0.122834317311768,0.103325781175765,1.18800285728205,0,0.910161361938026,0,0,0.375355559615893,0.554128230968366,0,0,0.150238058906597,0.226864366320042,0.179389635688862,0,0.423863802319124,0.300091096084402,0.412210116953756,0.257640540045629,0,0.843881661206331,0.584622030967192,0.252433774244115,0,0.161646056818812,0.355009592516614,0.201504196455281,0.339121184620975,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269662616320329,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234817388471643,0.144366447761074,0,0,0,0,1.47730203652438,2.10603838625314,1.18904929830983,0,0,0.141775097242386,0.0895585227028483,0.290633938513962,0,0,0.088048434013226,0.207328115540772,0.144119953416961,0.25248486685276,0.063497894292169,0,0,0,0.102827492703324,0,0,0.112131084345361,0,0.36669142910475,2.06834745212444,0,0.845302752556,0,0,0,0,0,0.285955987316295,0,0,0.65147236858747,0,0.791951872933429,0.301439377059586,0.871533458600294,0.399891964728228,0,0.502257091432126,0,0.239624855491583,0,1.42636905040718,2.17171960001369,0,0.179060963239896,0,0.197030760201927,0,0.385029108839245,0,0,0,0.167516265334349,0,0.749007023947182,0,0,0,0,0,0,0.178428988797162,0,0.234282829985426,0,0,0,0,0,0.521301686808497,0,0,1.03384013061444,0.862856803274467,0.320182673410333,0,0,0,0.744323423456331,0.767309866440312,0.561320188866147,0.896974044789907,1.02341449813341,0.965123526861645,0,3.54682295746108,1.77561725313127,5.66677376495283,4.67328986265259,2.32420756919918,0,0,0,0.574072240823034,0.182091168006717,0,0,0,0,0,0,0,0.170093705276516,0.431831832204279,0,0,0,0,0,0,0.438519753291869,0,0,0,0,0,0,0,0,0,1.6068392984416,0.193341436584244,0.154048617114644,0,0.551346289938122,0.107420244868274,0.290033387828457,0.255679882248303,0.445160178233687,0.330569830721956,0.192190067365106,0.255225424989168,0,0,3.77774816196768,1.3940745403212,0,1.06461206063404,0.869932992075073,1.66791797193528,0.286249773483982,0,0.316379424718726,0.38126038784765,0,0,0.318203247925937,0,0,0.274537029736055,0.942499218765491,1.41527737101321,0,0.842516912477962,0,3.1682753652067,0,0.682499557039929,1.1312434556297,0,0,0.66343897524122,2.19225442626881,0,0,0,0.92947049429925,0.281695602532241,0.860468113224309,0.294747123039363,0.35667105148125,2.48332744849418,0,0,0,0.349934720244983,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0.5745161103971,0.211673582723883,0,0,0,0.47003968731907,0,0.169291777801603,0.481764225311099,0,0,0.343505344755765,0,0.671028323677248,0.667396566847634,0.19538809540204,0.278406173895242,0,0,0.66614393599564,0,0,0.439524537815682,0,0,0,0,0.296964680832639,0,0,0.140669416410513,0,0,0.422250816255987,0.796991953004279,0,0,0,0.246169610922139,1.55519793830904,0.539210106883961,0.179021174675609,0,0,2.3948309234694,0,0.969332746095218,0.278304294485554,0,0,0.174919999992391,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0.295547618953547,0.658156191461918,0,0.278847488557207,0.230850775511391,0.113942055847001,0,0,0,0,0,0,0,0.156980256395025,0.332423363800313,0,0,0,0.569261198172555,0.158936578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| ||
|short_description=p13@CEP170 | |||
}} | }} |
Latest revision as of 19:18, 16 September 2015
Short description: | p13@CEP170 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_CEP170_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000522191_5end |
EntrezGene: | CEP170 |
HGNC: | 28920 |
UniProt: | E5RFU8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 5.27e-23 | 48 |
phagocyte | 5.27e-23 | 48 |
classical monocyte | 4.62e-20 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.62e-20 | 42 |
macrophage dendritic cell progenitor | 4.05e-18 | 61 |
granulocyte monocyte progenitor cell | 1.78e-17 | 67 |
monopoietic cell | 3.89e-17 | 59 |
monocyte | 3.89e-17 | 59 |
monoblast | 3.89e-17 | 59 |
promonocyte | 3.89e-17 | 59 |
myeloid lineage restricted progenitor cell | 1.06e-14 | 66 |
myeloid leukocyte | 2.48e-14 | 72 |
visceral preadipocyte | 1.05e-09 | 3 |
stem cell | 1.97e-09 | 441 |
myeloid cell | 2.22e-09 | 108 |
common myeloid progenitor | 2.22e-09 | 108 |
multi fate stem cell | 4.79e-09 | 427 |
somatic stem cell | 1.01e-08 | 433 |
preadipocyte | 7.40e-08 | 12 |
fibroblast of tunica adventitia of artery | 7.92e-07 | 4 |
fibroblast of the aortic adventitia | 7.92e-07 | 4 |
nongranular leukocyte | 8.32e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.01e-16 | 76 |
bone element | 1.86e-14 | 82 |
hematopoietic system | 2.86e-13 | 98 |
blood island | 2.86e-13 | 98 |
lateral plate mesoderm | 1.12e-12 | 203 |
skeletal element | 1.37e-12 | 90 |
musculoskeletal system | 1.57e-12 | 167 |
mesoderm | 2.47e-12 | 315 |
mesoderm-derived structure | 2.47e-12 | 315 |
presumptive mesoderm | 2.47e-12 | 315 |
immune system | 5.65e-12 | 93 |
hemolymphoid system | 2.15e-11 | 108 |
skeletal system | 1.09e-10 | 100 |
systemic artery | 1.76e-07 | 33 |
systemic arterial system | 1.76e-07 | 33 |
artery wall | 7.92e-07 | 4 |
tunica adventitia of artery | 7.92e-07 | 4 |
adventitia | 7.92e-07 | 4 |
tunica adventitia of blood vessel | 7.92e-07 | 4 |
aorta tunica adventitia | 7.92e-07 | 4 |
aorta wall | 7.92e-07 | 4 |