FFCP PHASE1:Hg19::chr1:146989697..146989701,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:146989697..146989701,-
|short_description=p1@LOC100289211
|description=CAGE_peak_1_at_LOC100289211_5end
|association_with_transcript=0bp_to_ENST00000437831...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=100289211 | |EntrezGene=100289211 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000437831,NR_038423,uc001epp.2_5end | |||
|cluster_id=chr1:146989697..146989701,- | |||
|coexpression_cluster_id=C159 | |||
|description=CAGE_peak_1_at_LOC100289211_5end | |||
|id=chr1:146989697..146989701,- | |||
|ontology_enrichment_celltype=CL:0000039!1.67e-08!7;CL:0000586!1.67e-08!7 | |||
|ontology_enrichment_celltype_v019=CL:0000039;1.03e-32;7!CL:0000586;1.03e-32;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.09e-32,7;CL:0000586,1.09e-32,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;6.73e-16;10!UBERON:0005564;6.73e-16;10 | |||
|ontology_enrichment_disease=DOID:162!3.26e-25!235;DOID:14566!4.07e-24!239;DOID:0050687!9.04e-19!143;DOID:305!1.90e-14!106;DOID:0050686!1.33e-12!137;DOID:3095!4.50e-09!22;DOID:2994!4.50e-09!22;DOID:1036!5.57e-09!8;DOID:3119!2.09e-08!14;DOID:2531!3.28e-07!51;DOID:0060083!3.28e-07!51 | |||
|ontology_enrichment_disease_v019=DOID:3095;6.84e-22;22!DOID:2994;6.84e-22;22!DOID:1036;1.72e-07;8!DOID:1799;2.31e-07;1!DOID:10165;2.31e-07;1!DOID:1798;2.31e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,6.35e-22,22;DOID:2994,6.35e-22,22;DOID:0050687,5.16e-12,143;DOID:162,1.48e-10,235;DOID:14566,3.08e-10,239;DOID:305,1.59e-07,106;DOID:1036,1.92e-07,8;DOID:1799,2.80e-07,1;DOID:10165,2.80e-07,1;DOID:1798,2.80e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0003135!1.98e-08!11;UBERON:0003101!4.48e-07!22;UBERON:0000079!4.48e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0003135;2.11e-20;11!UBERON:0000473;6.50e-20;8!UBERON:0003101;6.18e-10;22!UBERON:0000079;6.18e-10;22!UBERON:0001301;1.39e-07;1!UBERON:0000991;1.89e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003135,2.29e-20,11;UBERON:0000473,6.63e-20,8;UBERON:0003101,6.44e-10,22;UBERON:0000079,6.44e-10,22;UBERON:0001301,1.58e-07,1;UBERON:0000991,1.90e-07,21;UBERON:0009196,1.90e-07,21;UBERON:0009117,1.90e-07,21;UBERON:0005564,1.90e-07,21;UBERON:0003133,2.10e-07,48;UBERON:0004176,4.27e-07,22 | |||
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| ||
|short_description=p1@LOC100289211 | |||
}} | }} |
Latest revision as of 19:24, 16 September 2015
Short description: | p1@LOC100289211 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOC100289211_5end |
Coexpression cluster: | C159_choriocarcinoma_pancreatic_placenta_chorionic_testicular_bronchioalveolar_seminal |
Association with transcript: | 0bp_to_ENST00000437831, NR_038423, uc001epp.2_5end |
EntrezGene: | LOC100289211 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.09e-32 | 7 |
germ cell | 1.09e-32 | 7 |
Ontology term | p-value | n |
---|---|---|
male reproductive organ | 2.29e-20 | 11 |
testis | 6.63e-20 | 8 |
male organism | 6.44e-10 | 22 |
male reproductive system | 6.44e-10 | 22 |
epididymis | 1.58e-07 | 1 |
gonad | 1.90e-07 | 21 |
indifferent external genitalia | 1.90e-07 | 21 |
indifferent gonad | 1.90e-07 | 21 |
gonad primordium | 1.90e-07 | 21 |
reproductive organ | 2.10e-07 | 48 |
external genitalia | 4.27e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 6.35e-22 | 22 |
germ cell cancer | 6.35e-22 | 22 |
cell type cancer | 5.16e-12 | 143 |
cancer | 1.48e-10 | 235 |
disease of cellular proliferation | 3.08e-10 | 239 |
carcinoma | 1.59e-07 | 106 |
chronic leukemia | 1.92e-07 | 8 |
islet cell tumor | 2.80e-07 | 1 |
endocrine pancreas cancer | 2.80e-07 | 1 |
pancreatic endocrine carcinoma | 2.80e-07 | 1 |