FFCP PHASE1:Hg19::chr20:48185113..48185170,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr20:48185113..48185170,-
|short_description=p3@PTGIS
|description=CAGE_peak_3_at_PTGIS_5end
|association_with_transcript=-406bp_to_NM_000961,uc002xut.2,uc010z...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5740 | |EntrezGene=5740 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9603 | |HGNC=9603 | ||
|TSSclassifier=strong | |||
|UniProt=Q16647 | |UniProt=Q16647 | ||
|association_with_transcript=-406bp_to_NM_000961,uc002xut.2,uc010zyi.1_5end | |||
|cluster_id=chr20:48185113..48185170,- | |||
|description=CAGE_peak_3_at_PTGIS_5end | |||
|id=chr20:48185113..48185170,- | |||
|ontology_enrichment_celltype=CL:0000055!2.19e-16!180;CL:0000393!2.74e-10!60;CL:0000211!2.74e-10!60;CL:0000057!1.64e-09!75;CL:0000183!4.76e-09!59;CL:0000187!7.83e-09!54;CL:0000680!2.07e-08!57;CL:0000056!2.07e-08!57;CL:0000355!2.07e-08!57;CL:0000192!4.49e-08!42;CL:0000514!4.49e-08!42;CL:0002494!1.20e-07!16;CL:0000359!3.88e-07!32;CL:0000499!6.35e-07!27 | |||
|ontology_enrichment_celltype_v019=CL:0002494;2.01e-08;16!CL:0000359;8.41e-08;32!CL:0002334;4.37e-07;12!CL:0000499;9.65e-07;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,3.45e-09,61;CL:0000211,3.45e-09,61;CL:0002494,1.70e-08,16;CL:0000359,4.11e-08,32;CL:0000057,5.47e-08,76;CL:0000192,6.94e-08,43;CL:0000514,6.94e-08,43;CL:0000187,1.20e-07,55;CL:0000680,4.70e-07,58;CL:0000056,4.70e-07,58;CL:0000355,4.70e-07,58;CL:0002334,5.01e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!9.88e-13!27;UBERON:0007023!5.49e-12!115;UBERON:0000948!8.64e-12!24;UBERON:0005498!8.64e-12!24;UBERON:0004140!8.64e-12!24;UBERON:0009881!8.64e-12!24;UBERON:0004141!8.64e-12!24;UBERON:0003084!8.64e-12!24;UBERON:0007005!8.64e-12!24;UBERON:0004139!8.64e-12!24;UBERON:0004291!8.64e-12!24;UBERON:0000475!6.66e-11!365;UBERON:0004872!7.64e-11!84;UBERON:0002385!3.22e-10!63;UBERON:0001015!3.22e-10!63;UBERON:0000383!3.22e-10!63;UBERON:0000025!3.98e-10!194;UBERON:0001134!1.62e-09!61;UBERON:0002036!1.62e-09!61;UBERON:0003082!1.62e-09!61;UBERON:0000119!2.42e-09!312;UBERON:0000477!3.66e-09!286;UBERON:0000481!8.51e-09!347;UBERON:0000483!9.70e-09!309;UBERON:0000468!1.02e-08!659;UBERON:0004111!2.76e-08!241;UBERON:0003075!3.24e-08!86;UBERON:0007284!3.24e-08!86;UBERON:0001009!3.28e-08!113;UBERON:0000073!4.13e-08!94;UBERON:0001016!4.13e-08!94;UBERON:0005743!4.91e-08!86;UBERON:0002346!6.13e-08!90;UBERON:0004290!1.24e-07!70;UBERON:0004535!1.61e-07!110;UBERON:0001017!2.67e-07!82;UBERON:0002049!2.68e-07!79;UBERON:0007798!2.68e-07!79;UBERON:0000914!2.69e-07!83;UBERON:0002329!2.69e-07!83;UBERON:0003077!2.69e-07!83;UBERON:0003059!2.69e-07!83;UBERON:0007282!2.69e-07!83;UBERON:0009618!2.69e-07!83;UBERON:0007285!2.69e-07!83;UBERON:0001637!4.15e-07!42;UBERON:0003509!4.15e-07!42;UBERON:0004572!4.15e-07!42;UBERON:0003914!7.00e-07!118 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;2.84e-13;25!UBERON:0000948;3.23e-12;22!UBERON:0004457;2.34e-07;9!UBERON:0000042;2.34e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,2.74e-14,27;UBERON:0000948,3.25e-13,24;UBERON:0005498,3.25e-13,24;UBERON:0004140,3.25e-13,24;UBERON:0009881,3.25e-13,24;UBERON:0004141,3.25e-13,24;UBERON:0003084,3.25e-13,24;UBERON:0007005,3.25e-13,24;UBERON:0004139,3.25e-13,24;UBERON:0004291,3.25e-13,24;UBERON:0007023,4.67e-12,114;UBERON:0010314,4.48e-10,132;UBERON:0004872,3.43e-09,83;UBERON:0002385,6.47e-09,64;UBERON:0001015,6.47e-09,64;UBERON:0000383,6.47e-09,64;UBERON:0000025,2.24e-08,192;UBERON:0001134,3.40e-08,62;UBERON:0002036,3.40e-08,62;UBERON:0003082,3.40e-08,62;UBERON:0003075,1.19e-07,82;UBERON:0007284,1.19e-07,82;UBERON:0001009,2.32e-07,112;UBERON:0002346,6.06e-07,86;UBERON:0000119,6.81e-07,309;UBERON:0003103,7.82e-07,68;UBERON:0001637,8.06e-07,42;UBERON:0003509,8.06e-07,42;UBERON:0004572,8.06e-07,42;UBERON:0004111,8.46e-07,240;UBERON:0001017,9.54e-07,81 | |||
|phase1_expression=19.9846217197612,13.4883330051319,34.251920195321,12.0087958023756,13.4088328328186,70.6594204521299,7.59899634504932,1.89515962028049,1.82829939739887,0.245733936501509,0.697801167972428,0,0.263766978228454,2.10402800032079,5.63375538737457,0,0,0,0,30.4109013449666,30.6001036866379,12.2247341376454,1.71741592278634,0.958120975510189,0.627713197974014,0,0,0,0,0,0,0,0,0,0,0,0,1.10799081706375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81619850790011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0.130059347559878,0.164437904603676,0.552700035571697,0,0,0,0,0.339928028092699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,58.5136479153508,14.0847180537764,19.051521714686,13.7346877906135,3.50936537445123,6.0835537963546,1.5905718941022,4.37971383272372,19.7577767872902,12.195116860441,12.0333656399583,9.10304574709103,0,0,0,0,0,0,0,0,0.198762407366705,0.860234595106124,0,0.56530794192401,0,0.275118041940067,0,0,0,0,0.402829317109147,0,0,0,0.81014194788176,0.535798369704479,1.79623498100936,0.450445921933289,0,0,0.183201743930407,0,0,0,34.291064666977,17.3483800980474,7.94455084879313,27.2494789711373,28.3734705758686,30.8372680078269,23.4847790605351,3.94668077467456,4.04574346019696,2.96363478553314,1.79808093424805,13.7735259156888,6.91411109375999,0.234321431833797,0,0,0.747243402759005,0.23486899728753,0.323745888736263,0,0,0,0.826606249406124,4.75201142912821,0.989067717114227,0.910161361938026,0,0.841680569770331,0.625592599359821,0,0.877955241761676,0.612975591598039,3.90618953157152,4.65071950956086,0.538168907066586,3.41691822109708,7.41761654058466,7.20218630602566,30.1943910668626,2.06112432036503,3.90845398296339,2.53164498361899,13.8360547328902,8.58274832429989,18.8702292216714,20.8523413296267,1.77504796258307,2.41805035746337,2.54340888465731,0,0,0,12.8072391436075,15.6385126619353,8.59835177234436,7.67091807113741,5.80337957013945,9.85438869504741,0,5.78916844373597,0,0.928735856063958,0.721879481669586,0,0,0,0,0,0,0,0,0,0,4.20725321410337,16.0513864419246,7.3504355692771,0,0.982827216677626,3.54473944008842,0,0,8.57839051492628,0,0,0,0,0,0,4.3299402607582,4.17349457910277,25.5950953434091,0,0.462985512576611,0.570762456703795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,5.04589879554123,45.3398471586611,2.12681028880755,2.97324946242889,3.57656445851882,0,0,0,0.514414748524284,0,0,12.1531294609425,0,0,0,9.24019066730619,0,32.8568920994949,25.2744702994085,27.6925185574298,0,0,0,2.39624855491583,6.89171615004683,0,0.579125226670317,0,1.43248770591916,0,0,0,0,1.52456774533478,5.20559415430487,1.54657762555539,2.68026024534958,1.91381625495949,0,0,0,7.23879801142925,1.50051156317903,1.62759014219841,9.98260135347874,3.92543775353756,2.20783381047509,3.63138386477411,16.8529815847523,0,5.17365356462525,0.664225598535437,1.29058417979192,6.16873662723388,8.61525092836058,13.7257369524342,0,0,0,0,0,0.30239029332968,30.2691525538908,9.66810431714793,30.591950293205,52.1526337470703,29.6790204458688,23.6455264081103,44.5254199334973,1.3878872442239,6.39222211127257,6.57017248110473,1.03850885836724,2.90525946149898,0,0,0,9.07034140500393,5.46273504020151,9.57208229203796,0,0,0,0,0,0,0,0.647747748306418,0,0.270946437543853,1.00337954770971,0,0,0,0,0,0.769350375349168,36.737640318367,2.92840555197873,3.81251743096572,0,0,0,0,17.6752322828576,2.80345083047154,0,0.460511024178389,0.551346289938122,2.90034661144339,0.870100163485371,0.340906509664404,4.62966585363034,0,0.192190067365106,0,0,23.7071230141616,12.9073062200562,2.7881490806424,10.7811753061631,7.45228442443831,1.73986598415015,10.0075078316117,6.29749501664761,6.69885064847401,12.9715564134678,2.85945290885737,0.767693373934002,1.28381696410176,22.9106338506674,12.5591782431877,0.899362287916574,2.47083326762449,0.942499218765491,12.5353138575456,4.75530963519025,9.68894449349657,1.46290121726877,7.55511817856982,2.11300293513511,2.45699840534374,11.4538399882507,22.6016233240486,56.7906303852508,18.5762913067542,8.33056681982149,1.73632660280006,1.31178950409327,4.46402829317949,1.8589409885985,9.29595488356397,0.143411352204052,0,4.9933947207375,3.90237170477658,46.6547874007838,94.5076342794918,0,0.349934720244983,0,0,0,4.0481834334015,0,0,0,0,0,0,0,0,0,0,0,0,3.52519434720661,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.4787524930142,0,0,0,0,1.78178808499583,0.614321404198464,1.9882952955326,2.67271891179974,0,0,0.211125408127993,49.8119970627674,7.45966571934099,0.251932747854276,0,0,14.9299002077668,0,0,0,42.9098814520661,0,0,2.90799823828566,1.76259386507517,7.98455192004777,0,0,29.7249825928265,0,0,0,0,0,0.173624994933292,4.42870692906919,3.49729672013683,0,0.110579259931225,0,4.16832254592548,0,0,20.6996195375214,0,0,0.0897576444097721,0,0,0.183195186803725,0.533034776018635,0,1.2558420511602,0,0,0,0,0,0,0.632994193584081,0,0.141353071433941,0,4.97630965539252,5.13053874119367,9.16545217400438,0,0.123563938946503,0,0.741412462787447,18.4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|phase1_expression=19.9846217197612,13.4883330051319,34.251920195321,12.0087958023756,13.4088328328186,70.6594204521299,7.59899634504932,1.89515962028049,1.82829939739887,0.245733936501509,0.697801167972428,0,0.263766978228454,2.10402800032079,5.63375538737457,0,0,0,0,30.4109013449666,30.6001036866379,12.2247341376454,1.71741592278634,0.958120975510189,0.627713197974014,0,0,0,0,0,0,0,0,0,0,0,0,1.10799081706375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81619850790011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0.130059347559878,0.164437904603676,0.552700035571697,0,0,0,0,0.339928028092699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,58.5136479153508,14.0847180537764,19.051521714686,13.7346877906135,3.50936537445123,6.0835537963546,1.5905718941022,4.37971383272372,19.7577767872902,12.195116860441,12.0333656399583,9.10304574709103,0,0,0,0,0,0,0,0,0.198762407366705,0.860234595106124,0,0.56530794192401,0,0.275118041940067,0,0,0,0,0.402829317109147,0,0,0,0.81014194788176,0.535798369704479,1.79623498100936,0.450445921933289,0,0,0.183201743930407,0,0,0,34.291064666977,17.3483800980474,7.94455084879313,27.2494789711373,28.3734705758686,30.8372680078269,23.4847790605351,3.94668077467456,4.04574346019696,2.96363478553314,1.79808093424805,13.7735259156888,6.91411109375999,0.234321431833797,0,0,0.747243402759005,0.23486899728753,0.323745888736263,0,0,0,0.826606249406124,4.75201142912821,0.989067717114227,0.910161361938026,0,0.841680569770331,0.625592599359821,0,0.877955241761676,0.612975591598039,3.90618953157152,4.65071950956086,0.538168907066586,3.41691822109708,7.41761654058466,7.20218630602566,30.1943910668626,2.06112432036503,3.90845398296339,2.53164498361899,13.8360547328902,8.58274832429989,18.8702292216714,20.8523413296267,1.77504796258307,2.41805035746337,2.54340888465731,0,0,0,12.8072391436075,15.6385126619353,8.59835177234436,7.67091807113741,5.80337957013945,9.85438869504741,0,5.78916844373597,0,0.928735856063958,0.721879481669586,0,0,0,0,0,0,0,0,0,0,4.20725321410337,16.0513864419246,7.3504355692771,0,0.982827216677626,3.54473944008842,0,0,8.57839051492628,0,0,0,0,0,0,4.3299402607582,4.17349457910277,25.5950953434091,0,0.462985512576611,0.570762456703795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,5.04589879554123,45.3398471586611,2.12681028880755,2.97324946242889,3.57656445851882,0,0,0,0.514414748524284,0,0,12.1531294609425,0,0,0,9.24019066730619,0,32.8568920994949,25.2744702994085,27.6925185574298,0,0,0,2.39624855491583,6.89171615004683,0,0.579125226670317,0,1.43248770591916,0,0,0,0,1.52456774533478,5.20559415430487,1.54657762555539,2.68026024534958,1.91381625495949,0,0,0,7.23879801142925,1.50051156317903,1.62759014219841,9.98260135347874,3.92543775353756,2.20783381047509,3.63138386477411,16.8529815847523,0,5.17365356462525,0.664225598535437,1.29058417979192,6.16873662723388,8.61525092836058,13.7257369524342,0,0,0,0,0,0.30239029332968,30.2691525538908,9.66810431714793,30.591950293205,52.1526337470703,29.6790204458688,23.6455264081103,44.5254199334973,1.3878872442239,6.39222211127257,6.57017248110473,1.03850885836724,2.90525946149898,0,0,0,9.07034140500393,5.46273504020151,9.57208229203796,0,0,0,0,0,0,0,0.647747748306418,0,0.270946437543853,1.00337954770971,0,0,0,0,0,0.769350375349168,36.737640318367,2.92840555197873,3.81251743096572,0,0,0,0,17.6752322828576,2.80345083047154,0,0.460511024178389,0.551346289938122,2.90034661144339,0.870100163485371,0.340906509664404,4.62966585363034,0,0.192190067365106,0,0,23.7071230141616,12.9073062200562,2.7881490806424,10.7811753061631,7.45228442443831,1.73986598415015,10.0075078316117,6.29749501664761,6.69885064847401,12.9715564134678,2.85945290885737,0.767693373934002,1.28381696410176,22.9106338506674,12.5591782431877,0.899362287916574,2.47083326762449,0.942499218765491,12.5353138575456,4.75530963519025,9.68894449349657,1.46290121726877,7.55511817856982,2.11300293513511,2.45699840534374,11.4538399882507,22.6016233240486,56.7906303852508,18.5762913067542,8.33056681982149,1.73632660280006,1.31178950409327,4.46402829317949,1.8589409885985,9.29595488356397,0.143411352204052,0,4.9933947207375,3.90237170477658,46.6547874007838,94.5076342794918,0,0.349934720244983,0,0,0,4.0481834334015,0,0,0,0,0,0,0,0,0,0,0,0,3.52519434720661,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.4787524930142,0,0,0,0,1.78178808499583,0.614321404198464,1.9882952955326,2.67271891179974,0,0,0.211125408127993,49.8119970627674,7.45966571934099,0.251932747854276,0,0,14.9299002077668,0,0,0,42.9098814520661,0,0,2.90799823828566,1.76259386507517,7.98455192004777,0,0,29.7249825928265,0,0,0,0,0,0.173624994933292,4.42870692906919,3.49729672013683,0,0.110579259931225,0,4.16832254592548,0,0,20.6996195375214,0,0,0.0897576444097721,0,0,0.183195186803725,0.533034776018635,0,1.2558420511602,0,0,0,0,0,0,0.632994193584081,0,0.141353071433941,0,4.97630965539252,5.13053874119367,9.16545217400438,0,0.123563938946503,0,0.741412462787447,18.4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| ||
|short_description=p3@PTGIS | |||
}} | }} |
Latest revision as of 19:36, 16 September 2015
Short description: | p3@PTGIS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PTGIS_5end |
Coexpression cluster: | NA |
Association with transcript: | -406bp_to_NM_000961, uc002xut.2, uc010zyi.1_5end |
EntrezGene: | PTGIS |
HGNC: | 9603 |
UniProt: | Q16647 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 3.45e-09 | 61 |
electrically active cell | 3.45e-09 | 61 |
cardiocyte | 1.70e-08 | 16 |
vascular associated smooth muscle cell | 4.11e-08 | 32 |
fibroblast | 5.47e-08 | 76 |
smooth muscle cell | 6.94e-08 | 43 |
smooth muscle myoblast | 6.94e-08 | 43 |
muscle cell | 1.20e-07 | 55 |
muscle precursor cell | 4.70e-07 | 58 |
myoblast | 4.70e-07 | 58 |
multi-potent skeletal muscle stem cell | 4.70e-07 | 58 |
preadipocyte | 5.01e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 2.74e-14 | 27 |
heart | 3.25e-13 | 24 |
primitive heart tube | 3.25e-13 | 24 |
primary heart field | 3.25e-13 | 24 |
anterior lateral plate mesoderm | 3.25e-13 | 24 |
heart tube | 3.25e-13 | 24 |
heart primordium | 3.25e-13 | 24 |
cardiac mesoderm | 3.25e-13 | 24 |
cardiogenic plate | 3.25e-13 | 24 |
heart rudiment | 3.25e-13 | 24 |
adult organism | 4.67e-12 | 114 |
structure with developmental contribution from neural crest | 4.48e-10 | 132 |
splanchnic layer of lateral plate mesoderm | 3.43e-09 | 83 |
muscle tissue | 6.47e-09 | 64 |
musculature | 6.47e-09 | 64 |
musculature of body | 6.47e-09 | 64 |
tube | 2.24e-08 | 192 |
skeletal muscle tissue | 3.40e-08 | 62 |
striated muscle tissue | 3.40e-08 | 62 |
myotome | 3.40e-08 | 62 |
neural plate | 1.19e-07 | 82 |
presumptive neural plate | 1.19e-07 | 82 |
circulatory system | 2.32e-07 | 112 |
neurectoderm | 6.06e-07 | 86 |
cell layer | 6.81e-07 | 309 |
compound organ | 7.82e-07 | 68 |
artery | 8.06e-07 | 42 |
arterial blood vessel | 8.06e-07 | 42 |
arterial system | 8.06e-07 | 42 |
anatomical conduit | 8.46e-07 | 240 |
central nervous system | 9.54e-07 | 81 |