FFCP PHASE1:Hg19::chr14:96178667..96178678,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8115 | |EntrezGene=8115 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11648 | |HGNC=11648 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-368bp_to_ENST00000553467_5end | |association_with_transcript=-368bp_to_ENST00000553467_5end | ||
|cluster_id=chr14:96178667..96178678,- | |||
|coexpression_cluster_id=C47 | |||
|description=CAGE_peak_2_at_TCL1A_5end | |description=CAGE_peak_2_at_TCL1A_5end | ||
|id=chr14:96178667..96178678,- | |id=chr14:96178667..96178678,- | ||
|ontology_enrichment_celltype=CL:0000236!5.98e-74!14;CL:0000945!3.06e-69!24;CL:0000826!3.06e-69!24;CL:0000542!1.06e-32!53;CL:0000051!1.06e-32!53;CL:0000838!8.75e-30!52;CL:0000784!4.95e-17!3;CL:0002087!8.35e-17!119;CL:0000738!9.25e-17!140;CL:0000817!5.15e-16!3;CL:0000037!1.08e-12!172;CL:0000566!1.08e-12!172;CL:0000988!1.03e-11!182;CL:0002031!2.09e-11!124;CL:0000785!3.78e-11!2;CL:0000955!3.78e-11!2;CL:0000818!3.78e-11!2;CL:0000954!3.78e-11!2;CL:0000816!3.78e-11!2;CL:0002032!1.28e-08!165;CL:0000837!1.28e-08!165;CL:0000842!1.21e-07!3 | |ontology_enrichment_celltype=CL:0000236!5.98e-74!14;CL:0000945!3.06e-69!24;CL:0000826!3.06e-69!24;CL:0000542!1.06e-32!53;CL:0000051!1.06e-32!53;CL:0000838!8.75e-30!52;CL:0000784!4.95e-17!3;CL:0002087!8.35e-17!119;CL:0000738!9.25e-17!140;CL:0000817!5.15e-16!3;CL:0000037!1.08e-12!172;CL:0000566!1.08e-12!172;CL:0000988!1.03e-11!182;CL:0002031!2.09e-11!124;CL:0000785!3.78e-11!2;CL:0000955!3.78e-11!2;CL:0000818!3.78e-11!2;CL:0000954!3.78e-11!2;CL:0000816!3.78e-11!2;CL:0002032!1.28e-08!165;CL:0000837!1.28e-08!165;CL:0000842!1.21e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000236;5.64e-108;13!CL:0000945;2.87e-70;24!CL:0000542;7.44e-24;53!CL:0000784;1.15e-19;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,3.56e-100,14;CL:0000945,3.51e-70,24;CL:0000826,3.51e-70,24;CL:0000838,6.50e-32,52;CL:0000542,2.71e-31,53;CL:0000051,2.71e-31,53;CL:0000784,9.53e-20,3;CL:0000738,2.98e-16,136;CL:0002087,1.03e-13,115;CL:0002031,4.25e-13,120;CL:0000037,6.31e-13,168;CL:0000988,3.33e-12,177;CL:0002032,1.78e-09,161;CL:0000837,1.78e-09,161 | |||
|ontology_enrichment_development_v019=CL:0000051;7.44e-24;53!UBERON:0001045;2.75e-15;1 | |||
|ontology_enrichment_disease=DOID:0060058!1.32e-08!10;DOID:12603!8.97e-07!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001154!7.19e-07!1;UBERON:0001153!7.19e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001154;2.75e-15;1!UBERON:0001153;2.75e-15;1!UBERON:0009854;2.75e-15;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001154,2.38e-15,1;UBERON:0001153,2.38e-15,1;UBERON:0001045,2.38e-15,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0,0,0,0,0,0,0,0,0.697204805222715,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27988733383968,7.64594055766984,4.44754626931777,7.68114400619713,7.60752375368424,4.59801951963587,5.2883589822789,7.63243003628291,0.569212969109448,1.17447437874188,1.14681968437569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476981248610684,1.71598473234038,2.22874500797739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0.743212700502875,0.432807638929335,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38141957765574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364909578431332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,1.09613338542806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552032215008773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187967835959707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26721740526556,0,0.250707539292375,0.530450887527676,0,0,0,0.213233981900981,0,0.0645889098360061,0,0,0,0,0,0,0.202056159043763,0,0,0,0,0,0,0,0,0,0,0.402547587182052,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0,0,0,0,0,0,0,0,0.697204805222715,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27988733383968,7.64594055766984,4.44754626931777,7.68114400619713,7.60752375368424,4.59801951963587,5.2883589822789,7.63243003628291,0.569212969109448,1.17447437874188,1.14681968437569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476981248610684,1.71598473234038,2.22874500797739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0.743212700502875,0.432807638929335,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38141957765574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364909578431332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,1.09613338542806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552032215008773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187967835959707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26721740526556,0,0.250707539292375,0.530450887527676,0,0,0,0.213233981900981,0,0.0645889098360061,0,0,0,0,0,0,0.202056159043763,0,0,0,0,0,0,0,0,0,0,0.402547587182052,0 | ||
|short_description=p2@TCL1A | |short_description=p2@TCL1A | ||
}} | }} |
Latest revision as of 19:48, 16 September 2015
Short description: | p2@TCL1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TCL1A_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | -368bp_to_ENST00000553467_5end |
EntrezGene: | TCL1A |
HGNC: | 11648 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 3.56e-100 | 14 |
lymphocyte of B lineage | 3.51e-70 | 24 |
pro-B cell | 3.51e-70 | 24 |
lymphoid lineage restricted progenitor cell | 6.50e-32 | 52 |
lymphocyte | 2.71e-31 | 53 |
common lymphoid progenitor | 2.71e-31 | 53 |
plasmacytoid dendritic cell | 9.53e-20 | 3 |
leukocyte | 2.98e-16 | 136 |
nongranular leukocyte | 1.03e-13 | 115 |
hematopoietic lineage restricted progenitor cell | 4.25e-13 | 120 |
hematopoietic stem cell | 6.31e-13 | 168 |
hematopoietic cell | 3.33e-12 | 177 |
hematopoietic oligopotent progenitor cell | 1.78e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.78e-09 | 161 |
Ontology term | p-value | n |
---|---|---|
vermiform appendix | 2.38e-15 | 1 |
caecum | 2.38e-15 | 1 |
midgut | 2.38e-15 | 1 |