FFCP PHASE1:Hg19::chr19:19516507..19516539,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54815 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29989 | |||
|TSSclassifier=strong | |||
|UniProt=C9JHD7 | |||
|association_with_transcript=-65bp_to_ENST00000457895_5end | |||
|cluster_id=chr19:19516507..19516539,+ | |||
|description=CAGE_peak_7_at_GATAD2A_5end | |||
|id=chr19:19516507..19516539,+ | |||
|ontology_enrichment_celltype=CL:0000115!9.80e-13!35;CL:0002139!2.24e-11!24;CL:0002078!4.40e-11!44;CL:0000071!1.10e-10!18;CL:0002546!1.10e-10!18;CL:0000144!3.28e-10!625;CL:0002371!5.43e-09!591;CL:0000222!4.86e-08!119;CL:0000003!5.64e-08!722;CL:0000213!6.97e-08!57;CL:0000215!6.97e-08!57 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.93e-11;24!CL:0000115;2.36e-11;36!CL:0000071;6.21e-11;18!CL:0002078;1.22e-07;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,1.61e-13,36;CL:0002078,1.17e-11,45;CL:0002139,1.78e-11,24;CL:0000071,8.90e-11,18;CL:0002546,8.90e-11,18;CL:0000222,2.49e-08,121;CL:0000213,2.79e-08,58;CL:0000215,2.79e-08,58;CL:0002321,5.37e-07,250 | |||
|ontology_enrichment_development_v019=CL:0002546;6.21e-11;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!1.10e-10!18;UBERON:0004638!1.10e-10!18;UBERON:0004852!1.10e-10!18;UBERON:0000487!4.04e-10!22;UBERON:0000055!4.50e-09!69;UBERON:0002049!4.64e-09!79;UBERON:0007798!4.64e-09!79;UBERON:0006914!1.06e-08!25;UBERON:0004535!7.61e-08!110;UBERON:0001009!1.39e-07!113;UBERON:0004872!2.71e-07!84;UBERON:0001981!2.92e-07!60;UBERON:0007500!2.92e-07!60;UBERON:0004537!2.92e-07!60;UBERON:0006965!2.92e-07!60 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;6.21e-11;18!UBERON:0001986;6.21e-11;18!UBERON:0004852;6.21e-11;18!UBERON:0000487;1.60e-10;22!UBERON:0006914;3.87e-09;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,8.90e-11,18;UBERON:0001986,8.90e-11,18;UBERON:0004852,8.90e-11,18;UBERON:0000487,3.31e-10,22;UBERON:0000055,1.53e-09,68;UBERON:0002049,2.13e-09,78;UBERON:0007798,2.13e-09,78;UBERON:0006914,9.21e-09,25;UBERON:0004535,2.49e-08,109;UBERON:0001009,5.46e-08,112;UBERON:0004872,8.55e-08,83;UBERON:0007500,1.11e-07,59;UBERON:0001981,1.11e-07,59;UBERON:0004537,1.11e-07,59;UBERON:0006965,1.11e-07,59 | |||
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| |||
|short_description=p7@GATAD2A | |||
}} |
Latest revision as of 19:54, 16 September 2015
Short description: | p7@GATAD2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_GATAD2A_5end |
Coexpression cluster: | NA |
Association with transcript: | -65bp_to_ENST00000457895_5end |
EntrezGene: | GATAD2A |
HGNC: | 29989 |
UniProt: | C9JHD7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 1.61e-13 | 36 |
meso-epithelial cell | 1.17e-11 | 45 |
endothelial cell of vascular tree | 1.78e-11 | 24 |
blood vessel endothelial cell | 8.90e-11 | 18 |
embryonic blood vessel endothelial progenitor cell | 8.90e-11 | 18 |
mesodermal cell | 2.49e-08 | 121 |
lining cell | 2.79e-08 | 58 |
barrier cell | 2.79e-08 | 58 |
embryonic cell | 5.37e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 8.90e-11 | 18 |
endothelium | 8.90e-11 | 18 |
cardiovascular system endothelium | 8.90e-11 | 18 |
simple squamous epithelium | 3.31e-10 | 22 |
vessel | 1.53e-09 | 68 |
vasculature | 2.13e-09 | 78 |
vascular system | 2.13e-09 | 78 |
squamous epithelium | 9.21e-09 | 25 |
cardiovascular system | 2.49e-08 | 109 |
circulatory system | 5.46e-08 | 112 |
splanchnic layer of lateral plate mesoderm | 8.55e-08 | 83 |
epithelial tube open at both ends | 1.11e-07 | 59 |
blood vessel | 1.11e-07 | 59 |
blood vasculature | 1.11e-07 | 59 |
vascular cord | 1.11e-07 | 59 |