FFCP PHASE1:Hg19::chr2:29297381..29297394,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=388939 | |EntrezGene=388939 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=34383 | |HGNC=34383 | ||
|TSSclassifier=strong | |||
|UniProt=A6NGG8 | |UniProt=A6NGG8 | ||
|association_with_transcript=-254bp_to_ENST00000331664,NM_001029883,uc002rmt.1_5end | |association_with_transcript=-254bp_to_ENST00000331664,NM_001029883,uc002rmt.1_5end | ||
|cluster_id=chr2:29297381..29297394,- | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_1_at_C2orf71_5end | |description=CAGE_peak_1_at_C2orf71_5end | ||
|id=chr2:29297381..29297394,- | |id=chr2:29297381..29297394,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000243;1.23e-07;15!CL:0000125;1.23e-07;15!CL:0000095;6.29e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000243,1.25e-07,15;CL:0000125,1.25e-07,15;CL:0000030,1.25e-07,15;CL:0000339,1.25e-07,15;CL:0000095,6.38e-07,17;CL:0000123,6.38e-07,17 | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.98e-38;3!UBERON:0006238;2.76e-11;10!CL:0000339;1.23e-07;15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3093;1.99e-10;11!DOID:5409;2.61e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:3093,2.03e-10,11;DOID:5409,2.61e-08,4 | |||
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|short_description=p1@C2orf71 | |short_description=p1@C2orf71 | ||
}} | }} |
Latest revision as of 20:25, 16 September 2015
Short description: | p1@C2orf71 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_C2orf71_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | -254bp_to_ENST00000331664, NM_001029883, uc002rmt.1_5end |
EntrezGene: | C2orf71 |
HGNC: | 34383 |
UniProt: | A6NGG8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glial cell (sensu Vertebrata) | 1.25e-07 | 15 |
glial cell | 1.25e-07 | 15 |
glioblast | 1.25e-07 | 15 |
glioblast (sensu Vertebrata) | 1.25e-07 | 15 |
neuron associated cell | 6.38e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 6.38e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
pineal body | 1.13e-57 | 2 |
regional part of epithalamus | 1.13e-57 | 2 |
secretory circumventricular organ | 1.13e-57 | 2 |
circumventricular organ | 1.13e-57 | 2 |
epithalamus | 1.13e-57 | 2 |
gland of diencephalon | 1.78e-29 | 4 |
neuroendocrine gland | 1.78e-29 | 4 |
regional part of diencephalon | 1.78e-29 | 4 |
retina | 7.84e-20 | 6 |
photoreceptor array | 7.84e-20 | 6 |
posterior segment of eyeball | 7.84e-20 | 6 |
diencephalon | 2.46e-17 | 7 |
future diencephalon | 2.46e-17 | 7 |
eye | 7.43e-13 | 21 |
visual system | 7.43e-13 | 21 |
sense organ | 2.43e-11 | 24 |
sensory system | 2.43e-11 | 24 |
entire sense organ system | 2.43e-11 | 24 |
pre-chordal neural plate | 7.86e-08 | 61 |
brain | 5.66e-07 | 68 |
future brain | 5.66e-07 | 68 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 2.03e-10 | 11 |
lung small cell carcinoma | 2.61e-08 | 4 |