FFCP PHASE1:Hg19::chr2:29297381..29297394,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=388939 | |EntrezGene=388939 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=34383 | |HGNC=34383 | ||
|TSSclassifier=strong | |||
|UniProt=A6NGG8 | |UniProt=A6NGG8 | ||
|association_with_transcript=-254bp_to_ENST00000331664,NM_001029883,uc002rmt.1_5end | |association_with_transcript=-254bp_to_ENST00000331664,NM_001029883,uc002rmt.1_5end | ||
|cluster_id=chr2:29297381..29297394,- | |||
|coexpression_cluster_id=C24 | |coexpression_cluster_id=C24 | ||
|description=CAGE_peak_1_at_C2orf71_5end | |description=CAGE_peak_1_at_C2orf71_5end | ||
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000243;1.23e-07;15!CL:0000125;1.23e-07;15!CL:0000095;6.29e-07;17 | |ontology_enrichment_celltype_v019=CL:0000243;1.23e-07;15!CL:0000125;1.23e-07;15!CL:0000095;6.29e-07;17 | ||
|ontology_enrichment_celltype_v019_2=CL:0000243,1.25e-07,15;CL:0000125,1.25e-07,15;CL:0000030,1.25e-07,15;CL:0000339,1.25e-07,15;CL:0000095,6.38e-07,17;CL:0000123,6.38e-07,17 | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.98e-38;3!UBERON:0006238;2.76e-11;10!CL:0000339;1.23e-07;15 | |ontology_enrichment_development_v019=UBERON:0003056;1.98e-38;3!UBERON:0006238;2.76e-11;10!CL:0000339;1.23e-07;15 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3093;1.99e-10;11!DOID:5409;2.61e-08;4 | |ontology_enrichment_disease_v019=DOID:3093;1.99e-10;11!DOID:5409;2.61e-08;4 | ||
|ontology_enrichment_disease_v019_2=DOID:3093,2.03e-10,11;DOID:5409,2.61e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0002780!1.90e-26!41;UBERON:0001890!1.90e-26!41;UBERON:0006240!1.90e-26!41;UBERON:0003080!9.10e-26!42;UBERON:0005743!1.24e-24!86;UBERON:0001017!3.44e-23!82;UBERON:0003056!8.86e-23!61;UBERON:0003075!3.16e-22!86;UBERON:0007284!3.16e-22!86;UBERON:0007023!5.52e-22!115;UBERON:0000073!5.73e-22!94;UBERON:0001016!5.73e-22!94;UBERON:0002346!4.44e-21!90;UBERON:0001869!1.11e-20!32;UBERON:0002619!1.79e-20!22;UBERON:0000955!1.80e-19!69;UBERON:0006238!1.80e-19!69;UBERON:0001893!2.18e-19!34;UBERON:0001049!2.21e-18!57;UBERON:0005068!2.21e-18!57;UBERON:0006241!2.21e-18!57;UBERON:0007135!2.21e-18!57;UBERON:0000956!6.02e-18!25;UBERON:0000203!6.02e-18!25;UBERON:0001950!9.25e-18!20;UBERON:0002616!1.12e-17!59;UBERON:0002791!1.80e-16!33;UBERON:0002020!5.96e-16!34;UBERON:0003528!5.96e-16!34;UBERON:0001905!1.82e-14!2;UBERON:0002757!1.82e-14!2;UBERON:0010134!1.82e-14!2;UBERON:0002784!1.82e-14!2;UBERON:0005408!1.82e-14!2;UBERON:0001899!1.82e-14!2;UBERON:0002360!2.24e-13!2;UBERON:0000094!2.24e-13!2;UBERON:0007645!2.24e-13!2;UBERON:0000153!6.12e-12!129;UBERON:0007811!6.12e-12!129;UBERON:0004121!6.17e-12!169;UBERON:0000924!1.44e-11!173;UBERON:0006601!1.44e-11!173;UBERON:0000033!3.93e-11!123;UBERON:0000200!8.28e-10!6;UBERON:0001894!4.61e-09!7;UBERON:0006222!4.61e-09!7;UBERON:0002079!7.26e-08!1;UBERON:0000483!8.98e-08!309;UBERON:0002146!1.01e-07!1;UBERON:0005623!1.01e-07!1;UBERON:0002902!1.15e-07!1;UBERON:0009899!1.15e-07!1;UBERON:0003296!1.19e-07!4;UBERON:0010133!1.19e-07!4;UBERON:0000119!1.19e-07!312;UBERON:0007190!1.30e-07!1;UBERON:0002022!1.58e-07!1;UBERON:0002581!2.63e-07!1;UBERON:0001882!2.98e-07!1;UBERON:0005403!2.98e-07!1;UBERON:0002363!3.17e-07!1;UBERON:0007647!3.17e-07!1;UBERON:0010115!3.17e-07!1;UBERON:0000025!8.96e-07!194 | |ontology_enrichment_uberon=UBERON:0002780!1.90e-26!41;UBERON:0001890!1.90e-26!41;UBERON:0006240!1.90e-26!41;UBERON:0003080!9.10e-26!42;UBERON:0005743!1.24e-24!86;UBERON:0001017!3.44e-23!82;UBERON:0003056!8.86e-23!61;UBERON:0003075!3.16e-22!86;UBERON:0007284!3.16e-22!86;UBERON:0007023!5.52e-22!115;UBERON:0000073!5.73e-22!94;UBERON:0001016!5.73e-22!94;UBERON:0002346!4.44e-21!90;UBERON:0001869!1.11e-20!32;UBERON:0002619!1.79e-20!22;UBERON:0000955!1.80e-19!69;UBERON:0006238!1.80e-19!69;UBERON:0001893!2.18e-19!34;UBERON:0001049!2.21e-18!57;UBERON:0005068!2.21e-18!57;UBERON:0006241!2.21e-18!57;UBERON:0007135!2.21e-18!57;UBERON:0000956!6.02e-18!25;UBERON:0000203!6.02e-18!25;UBERON:0001950!9.25e-18!20;UBERON:0002616!1.12e-17!59;UBERON:0002791!1.80e-16!33;UBERON:0002020!5.96e-16!34;UBERON:0003528!5.96e-16!34;UBERON:0001905!1.82e-14!2;UBERON:0002757!1.82e-14!2;UBERON:0010134!1.82e-14!2;UBERON:0002784!1.82e-14!2;UBERON:0005408!1.82e-14!2;UBERON:0001899!1.82e-14!2;UBERON:0002360!2.24e-13!2;UBERON:0000094!2.24e-13!2;UBERON:0007645!2.24e-13!2;UBERON:0000153!6.12e-12!129;UBERON:0007811!6.12e-12!129;UBERON:0004121!6.17e-12!169;UBERON:0000924!1.44e-11!173;UBERON:0006601!1.44e-11!173;UBERON:0000033!3.93e-11!123;UBERON:0000200!8.28e-10!6;UBERON:0001894!4.61e-09!7;UBERON:0006222!4.61e-09!7;UBERON:0002079!7.26e-08!1;UBERON:0000483!8.98e-08!309;UBERON:0002146!1.01e-07!1;UBERON:0005623!1.01e-07!1;UBERON:0002902!1.15e-07!1;UBERON:0009899!1.15e-07!1;UBERON:0003296!1.19e-07!4;UBERON:0010133!1.19e-07!4;UBERON:0000119!1.19e-07!312;UBERON:0007190!1.30e-07!1;UBERON:0002022!1.58e-07!1;UBERON:0002581!2.63e-07!1;UBERON:0001882!2.98e-07!1;UBERON:0005403!2.98e-07!1;UBERON:0002363!3.17e-07!1;UBERON:0007647!3.17e-07!1;UBERON:0010115!3.17e-07!1;UBERON:0000025!8.96e-07!194 | ||
|ontology_enrichment_uberon_v019=UBERON:0001905;1.13e-57;2!UBERON:0002757;1.13e-57;2!UBERON:0010134;1.13e-57;2!UBERON:0005408;1.13e-57;2!UBERON:0001899;1.13e-57;2!UBERON:0003296;1.78e-29;4!UBERON:0010133;1.78e-29;4!UBERON:0002784;1.78e-29;4!UBERON:0000966;1.52e-23;5!UBERON:0005388;1.52e-23;5!UBERON:0001802;1.52e-23;5!UBERON:0001894;2.46e-17;7!UBERON:0000970;1.88e-13;20!UBERON:0002104;7.58e-13;21!UBERON:0000020;8.56e-12;23!UBERON:0001032;2.48e-11;24!UBERON:0004456;2.48e-11;24!UBERON:0000019;6.29e-07;19!UBERON:0000047;6.29e-07;19!UBERON:0004088;6.29e-07;19!UBERON:0010230;6.29e-07;19 | |ontology_enrichment_uberon_v019=UBERON:0001905;1.13e-57;2!UBERON:0002757;1.13e-57;2!UBERON:0010134;1.13e-57;2!UBERON:0005408;1.13e-57;2!UBERON:0001899;1.13e-57;2!UBERON:0003296;1.78e-29;4!UBERON:0010133;1.78e-29;4!UBERON:0002784;1.78e-29;4!UBERON:0000966;1.52e-23;5!UBERON:0005388;1.52e-23;5!UBERON:0001802;1.52e-23;5!UBERON:0001894;2.46e-17;7!UBERON:0000970;1.88e-13;20!UBERON:0002104;7.58e-13;21!UBERON:0000020;8.56e-12;23!UBERON:0001032;2.48e-11;24!UBERON:0004456;2.48e-11;24!UBERON:0000019;6.29e-07;19!UBERON:0000047;6.29e-07;19!UBERON:0004088;6.29e-07;19!UBERON:0010230;6.29e-07;19 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.13e-57,2;UBERON:0002757,1.13e-57,2;UBERON:0010134,1.13e-57,2;UBERON:0005408,1.13e-57,2;UBERON:0001899,1.13e-57,2;UBERON:0003296,1.78e-29,4;UBERON:0010133,1.78e-29,4;UBERON:0002784,1.78e-29,4;UBERON:0000966,7.84e-20,6;UBERON:0005388,7.84e-20,6;UBERON:0001802,7.84e-20,6;UBERON:0001894,2.46e-17,7;UBERON:0006222,2.46e-17,7;UBERON:0000970,7.43e-13,21;UBERON:0002104,7.43e-13,21;UBERON:0000020,2.43e-11,24;UBERON:0001032,2.43e-11,24;UBERON:0004456,2.43e-11,24;UBERON:0003056,7.86e-08,61;UBERON:0000955,5.66e-07,68;UBERON:0006238,5.66e-07,68 | |||
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|short_description=p1@C2orf71 | |short_description=p1@C2orf71 | ||
}} | }} |
Latest revision as of 20:25, 16 September 2015
Short description: | p1@C2orf71 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_C2orf71_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | -254bp_to_ENST00000331664, NM_001029883, uc002rmt.1_5end |
EntrezGene: | C2orf71 |
HGNC: | 34383 |
UniProt: | A6NGG8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glial cell (sensu Vertebrata) | 1.25e-07 | 15 |
glial cell | 1.25e-07 | 15 |
glioblast | 1.25e-07 | 15 |
glioblast (sensu Vertebrata) | 1.25e-07 | 15 |
neuron associated cell | 6.38e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 6.38e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
pineal body | 1.13e-57 | 2 |
regional part of epithalamus | 1.13e-57 | 2 |
secretory circumventricular organ | 1.13e-57 | 2 |
circumventricular organ | 1.13e-57 | 2 |
epithalamus | 1.13e-57 | 2 |
gland of diencephalon | 1.78e-29 | 4 |
neuroendocrine gland | 1.78e-29 | 4 |
regional part of diencephalon | 1.78e-29 | 4 |
retina | 7.84e-20 | 6 |
photoreceptor array | 7.84e-20 | 6 |
posterior segment of eyeball | 7.84e-20 | 6 |
diencephalon | 2.46e-17 | 7 |
future diencephalon | 2.46e-17 | 7 |
eye | 7.43e-13 | 21 |
visual system | 7.43e-13 | 21 |
sense organ | 2.43e-11 | 24 |
sensory system | 2.43e-11 | 24 |
entire sense organ system | 2.43e-11 | 24 |
pre-chordal neural plate | 7.86e-08 | 61 |
brain | 5.66e-07 | 68 |
future brain | 5.66e-07 | 68 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 2.03e-10 | 11 |
lung small cell carcinoma | 2.61e-08 | 4 |