FFCP PHASE1:Hg19::chr13:23489937..23489969,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr13:23489937..23489969,+
|short_description=p1@NUS1P2
|description=CAGE_peak_1_at_NUS1P2_5end
|association_with_transcript=147bp_to_ENST00000417358_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=38473 | |HGNC=38473 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=147bp_to_ENST00000417358_5end | |||
|cluster_id=chr13:23489937..23489969,+ | |||
|description=CAGE_peak_1_at_NUS1P2_5end | |||
|id=chr13:23489937..23489969,+ | |||
|ontology_enrichment_celltype=CL:0000047!2.27e-08!8 | |||
|ontology_enrichment_celltype_v019=CL:0002322;2.97e-12;5!CL:0000064;2.04e-07;3!CL:0000067;2.04e-07;3!CL:0005012;2.04e-07;3!CL:0002304;2.04e-07;3!CL:0002319;4.04e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,7.69e-13,5;CL:0000047,1.52e-10,8;CL:0000133,2.01e-08,59;CL:0000064,1.34e-07,3;CL:0000067,1.34e-07,3;CL:0005012,1.34e-07,3;CL:0002304,1.34e-07,3;CL:0002319,3.46e-07,25;CL:0000221,5.03e-07,72 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.85e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!1.58e-35!86;UBERON:0000073!5.47e-35!94;UBERON:0001016!5.47e-35!94;UBERON:0001017!1.44e-32!82;UBERON:0001049!5.01e-29!57;UBERON:0005068!5.01e-29!57;UBERON:0006241!5.01e-29!57;UBERON:0007135!5.01e-29!57;UBERON:0003056!9.69e-29!61;UBERON:0003075!3.51e-28!86;UBERON:0007284!3.51e-28!86;UBERON:0002616!1.51e-27!59;UBERON:0002780!7.78e-27!41;UBERON:0001890!7.78e-27!41;UBERON:0006240!7.78e-27!41;UBERON:0000955!3.50e-26!69;UBERON:0006238!3.50e-26!69;UBERON:0002346!6.18e-26!90;UBERON:0003080!7.37e-26!42;UBERON:0002020!1.24e-23!34;UBERON:0003528!1.24e-23!34;UBERON:0001893!1.88e-23!34;UBERON:0001869!7.45e-23!32;UBERON:0002791!1.15e-22!33;UBERON:0000153!5.50e-22!129;UBERON:0007811!5.50e-22!129;UBERON:0000033!6.67e-22!123;UBERON:0004121!2.25e-21!169;UBERON:0000956!1.96e-20!25;UBERON:0000203!1.96e-20!25;UBERON:0000924!3.15e-20!173;UBERON:0006601!3.15e-20!173;UBERON:0007023!1.83e-18!115;UBERON:0002619!3.85e-18!22;UBERON:0001950!2.31e-16!20;UBERON:0000475!2.44e-11!365;UBERON:0000481!3.88e-11!347;UBERON:0000483!1.29e-08!309;UBERON:0000119!1.46e-08!312;UBERON:0000064!2.39e-08!219;UBERON:0000922!4.24e-07!612;UBERON:0000200!5.08e-07!6;UBERON:0002021!8.49e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;5.43e-29;22!UBERON:0000956;2.61e-28;25!UBERON:0000203;2.61e-28;25!UBERON:0001950;3.59e-28;20!UBERON:0001869;5.87e-23;32!UBERON:0001893;4.80e-21;34!UBERON:0002791;6.25e-21;32!UBERON:0003528;3.22e-19;34!UBERON:0002020;3.22e-19;34!UBERON:0002780;1.39e-17;41!UBERON:0001890;1.39e-17;41!UBERON:0000073;1.07e-15;53!UBERON:0002616;1.07e-15;53!UBERON:0002021;1.89e-13;5!UBERON:0000955;8.50e-13;68!UBERON:0001017;2.56e-11;75!UBERON:0000200;8.55e-11;6!UBERON:0001016;2.36e-10;83!UBERON:0001870;1.15e-08;3!UBERON:0001872;1.35e-08;5!UBERON:0001778;2.04e-07;3!UBERON:0001775;2.04e-07;3!UBERON:0002104;2.56e-07;21!UBERON:0007625;4.12e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003056,3.23e-32,61;UBERON:0001017,6.73e-30,81;UBERON:0001016,1.51e-29,89;UBERON:0002619,1.03e-28,22;UBERON:0000956,5.42e-28,25;UBERON:0000203,5.42e-28,25;UBERON:0001950,6.92e-28,20;UBERON:0003075,4.02e-27,82;UBERON:0007284,4.02e-27,82;UBERON:0002780,3.92e-26,41;UBERON:0001890,3.92e-26,41;UBERON:0003080,3.92e-26,41;UBERON:0006240,3.92e-26,41;UBERON:0001869,9.19e-26,32;UBERON:0002346,2.05e-25,86;UBERON:0000073,4.98e-25,53;UBERON:0002616,4.98e-25,53;UBERON:0000955,1.01e-24,68;UBERON:0006238,1.01e-24,68;UBERON:0001893,5.85e-24,34;UBERON:0001049,2.61e-23,56;UBERON:0005068,2.61e-23,56;UBERON:0006241,2.61e-23,56;UBERON:0007135,2.61e-23,56;UBERON:0002791,2.70e-23,32;UBERON:0010371,2.34e-22,104;UBERON:0003528,1.19e-21,34;UBERON:0002020,1.19e-21,34;UBERON:0004121,1.95e-21,171;UBERON:0000924,1.95e-21,171;UBERON:0006601,1.95e-21,171;UBERON:0010314,1.87e-15,132;UBERON:0002021,1.43e-13,5;UBERON:0011216,4.83e-12,223;UBERON:0000200,1.67e-10,6;UBERON:0007023,1.54e-09,114;UBERON:0001870,1.38e-08,3;UBERON:0001872,1.52e-08,5;UBERON:0000019,1.24e-07,20;UBERON:0000047,1.24e-07,20;UBERON:0010312,1.24e-07,20;UBERON:0004088,1.24e-07,20;UBERON:0010230,1.24e-07,20;UBERON:0003072,1.24e-07,20;UBERON:0004128,1.24e-07,20;UBERON:0003071,1.24e-07,20;UBERON:0001778,1.34e-07,3;UBERON:0001775,1.34e-07,3;UBERON:0000970,3.43e-07,21;UBERON:0002104,3.43e-07,21;UBERON:0007625,4.15e-07,11;UBERON:0001456,8.59e-07,22 | |||
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| ||
|short_description=p1@NUS1P2 | |||
}} | }} |
Latest revision as of 20:29, 16 September 2015
Short description: | p1@NUS1P2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NUS1P2_5end |
Coexpression cluster: | NA |
Association with transcript: | 147bp_to_ENST00000417358_5end |
EntrezGene: | NA |
HGNC: | 38473 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 7.69e-13 | 5 |
neuronal stem cell | 1.52e-10 | 8 |
neurectodermal cell | 2.01e-08 | 59 |
ciliated cell | 1.34e-07 | 3 |
ciliated epithelial cell | 1.34e-07 | 3 |
multi-ciliated epithelial cell | 1.34e-07 | 3 |
non-pigmented ciliary epithelial cell | 1.34e-07 | 3 |
neural cell | 3.46e-07 | 25 |
ectodermal cell | 5.03e-07 | 72 |