FFCP PHASE1:Hg19::chr2:128293245..128293273,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4648 | |EntrezGene=4648 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7607 | |HGNC=7607 | ||
|TSSclassifier=strong | |||
|UniProt=F8WBZ4,C9J6C0,Q6PIF6 | |UniProt=F8WBZ4,C9J6C0,Q6PIF6 | ||
|association_with_transcript=-104bp_to_ENST00000272666,ENST00000389524,ENST00000428314,NM_001080527,uc002top.2_5end | |association_with_transcript=-104bp_to_ENST00000272666,ENST00000389524,ENST00000428314,NM_001080527,uc002top.2_5end | ||
|cluster_id=chr2:128293245..128293273,+ | |||
|coexpression_cluster_id=C25 | |coexpression_cluster_id=C25 | ||
|description=CAGE_peak_2_at_MYO7B_5end | |description=CAGE_peak_2_at_MYO7B_5end | ||
|id=chr2:128293245..128293273,+ | |id=chr2:128293245..128293273,+ | ||
|ontology_enrichment_celltype=CL:0000242!8.72e-11!2 | |ontology_enrichment_celltype=CL:0000242!8.72e-11!2 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006242;3.71e-10;1!UBERON:0001045;6.61e-10;1 | |||
|ontology_enrichment_disease=DOID:4929!8.72e-11!2;DOID:3119!8.27e-09!14 | |ontology_enrichment_disease=DOID:4929!8.72e-11!2;DOID:3119!8.27e-09!14 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!4.80e-29!35;UBERON:0000160!1.19e-28!27;UBERON:0000059!2.09e-22!11;UBERON:0004907!1.46e-16!5;UBERON:0001155!2.29e-14!9;UBERON:0001052!5.03e-12!4;UBERON:0004921!3.65e-11!129;UBERON:0004185!3.65e-11!129;UBERON:0001007!1.05e-09!155;UBERON:0001555!1.05e-09!155;UBERON:0007026!1.05e-09!155;UBERON:0004119!1.57e-08!169;UBERON:0000925!1.57e-08!169;UBERON:0006595!1.57e-08!169;UBERON:0002108!1.58e-08!14;UBERON:0006947!9.55e-08!3;UBERON:0004054!9.55e-08!3 | |ontology_enrichment_uberon=UBERON:0005409!4.80e-29!35;UBERON:0000160!1.19e-28!27;UBERON:0000059!2.09e-22!11;UBERON:0004907!1.46e-16!5;UBERON:0001155!2.29e-14!9;UBERON:0001052!5.03e-12!4;UBERON:0004921!3.65e-11!129;UBERON:0004185!3.65e-11!129;UBERON:0001007!1.05e-09!155;UBERON:0001555!1.05e-09!155;UBERON:0007026!1.05e-09!155;UBERON:0004119!1.57e-08!169;UBERON:0000925!1.57e-08!169;UBERON:0006595!1.57e-08!169;UBERON:0002108!1.58e-08!14;UBERON:0006947!9.55e-08!3;UBERON:0004054!9.55e-08!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0005409;1.85e-52;22!UBERON:0000160;2.87e-47;17!UBERON:0004921;2.53e-30;33!UBERON:0000059;3.33e-28;11!UBERON:0002108;5.90e-17;4!UBERON:0004907;4.47e-16;5!UBERON:0001155;5.90e-16;9!UBERON:0001555;3.64e-11;54!UBERON:0001301;5.79e-10;1!UBERON:0001154;6.61e-10;1!UBERON:0001153;6.61e-10;1!UBERON:0009854;6.61e-10;1!UBERON:0001052;1.39e-09;4!UBERON:0001007;2.22e-08;81!UBERON:0000945;1.30e-07;5!UBERON:0010039;1.30e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.80e-47,17;UBERON:0005409,3.32e-46,25;UBERON:0000059,3.10e-28,11;UBERON:0002108,5.90e-17,4;UBERON:0004907,4.14e-16,5;UBERON:0001155,5.79e-16,9;UBERON:0004921,3.69e-10,118;UBERON:0001301,5.79e-10,1;UBERON:0001154,6.33e-10,1;UBERON:0001153,6.33e-10,1;UBERON:0001045,6.33e-10,1;UBERON:0001052,1.34e-09,4;UBERON:0001007,2.71e-09,145;UBERON:0001555,2.71e-09,145;UBERON:0007026,2.71e-09,145;UBERON:0004119,3.34e-08,160;UBERON:0000925,3.34e-08,160;UBERON:0006595,3.34e-08,160 | |||
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|short_description=p2@MYO7B | |short_description=p2@MYO7B | ||
}} | }} |
Latest revision as of 20:45, 16 September 2015
Short description: | p2@MYO7B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MYO7B_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | -104bp_to_ENST00000272666, ENST00000389524, ENST00000428314, NM_001080527, uc002top.2_5end |
EntrezGene: | MYO7B |
HGNC: | 7607 |
UniProt: | F8WBZ4C9J6C0Q6PIF6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 2.80e-47 | 17 |
gastrointestinal system | 3.32e-46 | 25 |
large intestine | 3.10e-28 | 11 |
small intestine | 5.90e-17 | 4 |
lower digestive tract | 4.14e-16 | 5 |
colon | 5.79e-16 | 9 |
subdivision of digestive tract | 3.69e-10 | 118 |
epididymis | 5.79e-10 | 1 |
vermiform appendix | 6.33e-10 | 1 |
caecum | 6.33e-10 | 1 |
midgut | 6.33e-10 | 1 |
rectum | 1.34e-09 | 4 |
digestive system | 2.71e-09 | 145 |
digestive tract | 2.71e-09 | 145 |
primitive gut | 2.71e-09 | 145 |
endoderm-derived structure | 3.34e-08 | 160 |
endoderm | 3.34e-08 | 160 |
presumptive endoderm | 3.34e-08 | 160 |