FFCP PHASE1:Hg19::chr1:244615199..244615238,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=159 | |EntrezGene=159 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=292 | |HGNC=292 | ||
|TSSclassifier=strong | |||
|UniProt=F8W9D6 | |UniProt=F8W9D6 | ||
|association_with_transcript=-80bp_to_ENST00000449326_5end | |association_with_transcript=-80bp_to_ENST00000449326_5end | ||
|cluster_id=chr1:244615199..244615238,- | |||
|description=CAGE_peak_1_at_ADSS_5end | |description=CAGE_peak_1_at_ADSS_5end | ||
|id=chr1:244615199..244615238,- | |id=chr1:244615199..244615238,- | ||
|ontology_enrichment_celltype=CL:0000037!2.26e-16!172;CL:0000566!2.26e-16!172;CL:0002032!4.64e-16!165;CL:0000837!4.64e-16!165;CL:0000003!2.15e-15!722;CL:0000988!2.80e-15!182;CL:0000063!4.09e-13!578;CL:0000012!6.56e-13!682;CL:0000838!8.39e-13!52;CL:0000542!1.14e-12!53;CL:0000051!1.14e-12!53;CL:0000548!2.00e-12!679;CL:0000004!2.00e-12!679;CL:0000255!2.00e-12!679;CL:0002087!7.13e-12!119;CL:0000738!1.40e-10!140;CL:0002031!1.78e-09!124;CL:0000219!3.68e-08!390;CL:0000084!3.74e-08!25;CL:0000827!3.74e-08!25;CL:0000134!6.35e-08!358;CL:0002320!6.46e-08!365;CL:0000791!1.32e-07!18;CL:0000789!1.32e-07!18;CL:0002420!1.32e-07!18;CL:0002419!1.32e-07!18;CL:0000790!1.32e-07!18 | |ontology_enrichment_celltype=CL:0000037!2.26e-16!172;CL:0000566!2.26e-16!172;CL:0002032!4.64e-16!165;CL:0000837!4.64e-16!165;CL:0000003!2.15e-15!722;CL:0000988!2.80e-15!182;CL:0000063!4.09e-13!578;CL:0000012!6.56e-13!682;CL:0000838!8.39e-13!52;CL:0000542!1.14e-12!53;CL:0000051!1.14e-12!53;CL:0000548!2.00e-12!679;CL:0000004!2.00e-12!679;CL:0000255!2.00e-12!679;CL:0002087!7.13e-12!119;CL:0000738!1.40e-10!140;CL:0002031!1.78e-09!124;CL:0000219!3.68e-08!390;CL:0000084!3.74e-08!25;CL:0000827!3.74e-08!25;CL:0000134!6.35e-08!358;CL:0002320!6.46e-08!365;CL:0000791!1.32e-07!18;CL:0000789!1.32e-07!18;CL:0002420!1.32e-07!18;CL:0002419!1.32e-07!18;CL:0000790!1.32e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0000084;4.75e-08;25!CL:0000542;5.94e-08;53!CL:0000791;1.48e-07;18!CL:0000789;1.48e-07;18!CL:0002419;1.48e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.13e-15,168;CL:0002032,2.30e-15,161;CL:0000837,2.30e-15,161;CL:0000988,8.43e-15,177;CL:0000838,8.39e-13,52;CL:0000542,1.14e-12,53;CL:0000051,1.14e-12,53;CL:0002087,3.12e-11,115;CL:0000738,5.65e-10,136;CL:0002031,6.90e-09,120;CL:0000084,3.74e-08,25;CL:0000827,3.74e-08,25;CL:0000219,6.84e-08,386;CL:0000134,1.15e-07,354;CL:0002320,1.18e-07,361;CL:0000791,1.32e-07,18;CL:0000789,1.32e-07,18;CL:0002420,1.32e-07,18;CL:0002419,1.32e-07,18;CL:0000790,1.32e-07,18 | |||
|ontology_enrichment_development_v019=CL:0000051;5.94e-08;53!CL:0000790;1.48e-07;18 | |||
|ontology_enrichment_disease=DOID:14566!6.76e-19!239;DOID:162!7.51e-19!235;DOID:0050686!5.39e-12!137;DOID:2531!4.64e-10!51;DOID:0060083!4.64e-10!51;DOID:1240!1.46e-09!39;DOID:8692!8.33e-09!31;DOID:0050687!6.93e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.34e-08;31!DOID:1240;4.76e-08;39 | |||
|ontology_enrichment_disease_v019_2=DOID:14566,6.76e-19,239;DOID:162,7.51e-19,235;DOID:0050686,5.39e-12,137;DOID:2531,4.64e-10,51;DOID:0060083,4.64e-10,51;DOID:1240,1.46e-09,39;DOID:8692,8.33e-09,31;DOID:0050687,6.93e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0002384!1.56e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.80e-07,371 | |||
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| ||
|short_description=p1@ADSS | |short_description=p1@ADSS | ||
}} | }} |
Latest revision as of 20:50, 16 September 2015
Short description: | p1@ADSS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ADSS_5end |
Coexpression cluster: | NA |
Association with transcript: | -80bp_to_ENST00000449326_5end |
EntrezGene: | ADSS |
HGNC: | 292 |
UniProt: | F8W9D6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 1.13e-15 | 168 |
hematopoietic oligopotent progenitor cell | 2.30e-15 | 161 |
hematopoietic multipotent progenitor cell | 2.30e-15 | 161 |
hematopoietic cell | 8.43e-15 | 177 |
lymphoid lineage restricted progenitor cell | 8.39e-13 | 52 |
lymphocyte | 1.14e-12 | 53 |
common lymphoid progenitor | 1.14e-12 | 53 |
nongranular leukocyte | 3.12e-11 | 115 |
leukocyte | 5.65e-10 | 136 |
hematopoietic lineage restricted progenitor cell | 6.90e-09 | 120 |
T cell | 3.74e-08 | 25 |
pro-T cell | 3.74e-08 | 25 |
motile cell | 6.84e-08 | 386 |
mesenchymal cell | 1.15e-07 | 354 |
connective tissue cell | 1.18e-07 | 361 |
mature alpha-beta T cell | 1.32e-07 | 18 |
alpha-beta T cell | 1.32e-07 | 18 |
immature T cell | 1.32e-07 | 18 |
mature T cell | 1.32e-07 | 18 |
immature alpha-beta T cell | 1.32e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.80e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 6.76e-19 | 239 |
cancer | 7.51e-19 | 235 |
organ system cancer | 5.39e-12 | 137 |
hematologic cancer | 4.64e-10 | 51 |
immune system cancer | 4.64e-10 | 51 |
leukemia | 1.46e-09 | 39 |
myeloid leukemia | 8.33e-09 | 31 |
cell type cancer | 6.93e-07 | 143 |