FFCP PHASE1:Hg19::chr1:244615327..244615384,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=159 | |EntrezGene=159 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=292 | |HGNC=292 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=28bp_to_uc001iaj.2,uc009xgr.1_5end | |association_with_transcript=28bp_to_uc001iaj.2,uc009xgr.1_5end | ||
|cluster_id=chr1:244615327..244615384,- | |||
|description=CAGE_peak_3_at_ADSS_5end | |description=CAGE_peak_3_at_ADSS_5end | ||
|id=chr1:244615327..244615384,- | |id=chr1:244615327..244615384,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3095!9.99e-09!22;DOID:2994!9.99e-09!22 | |ontology_enrichment_disease=DOID:3095!9.99e-09!22;DOID:2994!9.99e-09!22 | ||
|ontology_enrichment_disease_v019=DOID:3095;2.87e-09;22!DOID:2994;2.87e-09;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,8.45e-09,22;DOID:2994,8.45e-09,22 | |||
|ontology_enrichment_uberon=UBERON:0000073!2.32e-17!94;UBERON:0001016!2.32e-17!94;UBERON:0000924!8.45e-17!173;UBERON:0006601!8.45e-17!173;UBERON:0001017!1.20e-15!82;UBERON:0004121!5.20e-15!169;UBERON:0005743!1.19e-14!86;UBERON:0000955!4.32e-13!69;UBERON:0006238!4.32e-13!69;UBERON:0001869!4.76e-13!32;UBERON:0000153!1.95e-12!129;UBERON:0007811!1.95e-12!129;UBERON:0001893!7.72e-12!34;UBERON:0002020!8.59e-12!34;UBERON:0003528!8.59e-12!34;UBERON:0000956!8.95e-12!25;UBERON:0000203!8.95e-12!25;UBERON:0000033!1.56e-11!123;UBERON:0002619!1.74e-11!22;UBERON:0002791!2.98e-11!33;UBERON:0001049!6.04e-11!57;UBERON:0005068!6.04e-11!57;UBERON:0006241!6.04e-11!57;UBERON:0007135!6.04e-11!57;UBERON:0002780!9.16e-11!41;UBERON:0001890!9.16e-11!41;UBERON:0006240!9.16e-11!41;UBERON:0001950!1.08e-10!20;UBERON:0003080!1.21e-10!42;UBERON:0002616!2.08e-10!59;UBERON:0002346!2.30e-08!90;UBERON:0003056!1.73e-07!61;UBERON:0003075!7.71e-07!86;UBERON:0007284!7.71e-07!86 | |ontology_enrichment_uberon=UBERON:0000073!2.32e-17!94;UBERON:0001016!2.32e-17!94;UBERON:0000924!8.45e-17!173;UBERON:0006601!8.45e-17!173;UBERON:0001017!1.20e-15!82;UBERON:0004121!5.20e-15!169;UBERON:0005743!1.19e-14!86;UBERON:0000955!4.32e-13!69;UBERON:0006238!4.32e-13!69;UBERON:0001869!4.76e-13!32;UBERON:0000153!1.95e-12!129;UBERON:0007811!1.95e-12!129;UBERON:0001893!7.72e-12!34;UBERON:0002020!8.59e-12!34;UBERON:0003528!8.59e-12!34;UBERON:0000956!8.95e-12!25;UBERON:0000203!8.95e-12!25;UBERON:0000033!1.56e-11!123;UBERON:0002619!1.74e-11!22;UBERON:0002791!2.98e-11!33;UBERON:0001049!6.04e-11!57;UBERON:0005068!6.04e-11!57;UBERON:0006241!6.04e-11!57;UBERON:0007135!6.04e-11!57;UBERON:0002780!9.16e-11!41;UBERON:0001890!9.16e-11!41;UBERON:0006240!9.16e-11!41;UBERON:0001950!1.08e-10!20;UBERON:0003080!1.21e-10!42;UBERON:0002616!2.08e-10!59;UBERON:0002346!2.30e-08!90;UBERON:0003056!1.73e-07!61;UBERON:0003075!7.71e-07!86;UBERON:0007284!7.71e-07!86 | ||
|ontology_enrichment_uberon_v019=UBERON:0001869;4.68e-12;32!UBERON:0000956;5.42e-12;25!UBERON:0000203;5.42e-12;25!UBERON:0002619;9.43e-12;22!UBERON:0002791;4.19e-11;32!UBERON:0001950;6.73e-11;20!UBERON:0001893;7.63e-11;34!UBERON:0003528;1.40e-10;34!UBERON:0002020;1.40e-10;34!UBERON:0002780;3.15e-08;41!UBERON:0001890;3.15e-08;41!UBERON:0001017;3.21e-07;75!UBERON:0001016;3.30e-07;83!UBERON:0000955;5.09e-07;68!UBERON:0000073;8.75e-07;53!UBERON:0002616;8.75e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.62e-18,89;UBERON:0004121,1.93e-17,171;UBERON:0000924,1.93e-17,171;UBERON:0006601,1.93e-17,171;UBERON:0001017,9.80e-16,81;UBERON:0000955,3.54e-13,68;UBERON:0006238,3.54e-13,68;UBERON:0001869,4.65e-13,32;UBERON:0001893,7.56e-12,34;UBERON:0003528,8.41e-12,34;UBERON:0002020,8.41e-12,34;UBERON:0000956,8.73e-12,25;UBERON:0000203,8.73e-12,25;UBERON:0002791,1.12e-11,32;UBERON:0002619,1.70e-11,22;UBERON:0001049,4.95e-11,56;UBERON:0005068,4.95e-11,56;UBERON:0006241,4.95e-11,56;UBERON:0007135,4.95e-11,56;UBERON:0000073,5.94e-11,53;UBERON:0002616,5.94e-11,53;UBERON:0002780,8.99e-11,41;UBERON:0001890,8.99e-11,41;UBERON:0003080,8.99e-11,41;UBERON:0006240,8.99e-11,41;UBERON:0001950,1.06e-10,20;UBERON:0002346,6.06e-09,86;UBERON:0003056,1.60e-07,61;UBERON:0003075,2.44e-07,82;UBERON:0007284,2.44e-07,82;UBERON:0011216,2.61e-07,223;UBERON:0010371,7.67e-07,104 | |||
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| ||
|short_description=p3@ADSS | |short_description=p3@ADSS | ||
}} | }} |
Latest revision as of 20:53, 16 September 2015
Short description: | p3@ADSS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ADSS_5end |
Coexpression cluster: | NA |
Association with transcript: | 28bp_to_uc001iaj.2, uc009xgr.1_5end |
EntrezGene: | ADSS |
HGNC: | 292 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nervous system | 1.62e-18 | 89 |
ectoderm-derived structure | 1.93e-17 | 171 |
ectoderm | 1.93e-17 | 171 |
presumptive ectoderm | 1.93e-17 | 171 |
central nervous system | 9.80e-16 | 81 |
brain | 3.54e-13 | 68 |
future brain | 3.54e-13 | 68 |
cerebral hemisphere | 4.65e-13 | 32 |
telencephalon | 7.56e-12 | 34 |
brain grey matter | 8.41e-12 | 34 |
gray matter | 8.41e-12 | 34 |
cerebral cortex | 8.73e-12 | 25 |
pallium | 8.73e-12 | 25 |
regional part of telencephalon | 1.12e-11 | 32 |
regional part of cerebral cortex | 1.70e-11 | 22 |
neural tube | 4.95e-11 | 56 |
neural rod | 4.95e-11 | 56 |
future spinal cord | 4.95e-11 | 56 |
neural keel | 4.95e-11 | 56 |
regional part of nervous system | 5.94e-11 | 53 |
regional part of brain | 5.94e-11 | 53 |
regional part of forebrain | 8.99e-11 | 41 |
forebrain | 8.99e-11 | 41 |
anterior neural tube | 8.99e-11 | 41 |
future forebrain | 8.99e-11 | 41 |
neocortex | 1.06e-10 | 20 |
neurectoderm | 6.06e-09 | 86 |
pre-chordal neural plate | 1.60e-07 | 61 |
neural plate | 2.44e-07 | 82 |
presumptive neural plate | 2.44e-07 | 82 |
organ system subdivision | 2.61e-07 | 223 |
ecto-epithelium | 7.67e-07 | 104 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 8.45e-09 | 22 |
germ cell cancer | 8.45e-09 | 22 |