FFCP PHASE1:Hg19::chr2:128398046..128398067,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55679 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16084 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-68bp_to_ENST00000494613_5end | |||
|cluster_id=chr2:128398046..128398067,- | |||
|description=CAGE_peak_14_at_LIMS2_5end | |||
|id=chr2:128398046..128398067,- | |||
|ontology_enrichment_celltype=CL:0000542!7.46e-13!53;CL:0000051!7.46e-13!53;CL:0000838!2.07e-12!52;CL:0000236!6.42e-09!14;CL:0000071!8.50e-09!18;CL:0002546!8.50e-09!18;CL:1000413!1.01e-07!9;CL:0002139!2.52e-07!24;CL:0000084!7.77e-07!25;CL:0000827!7.77e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000236;5.27e-17;13!CL:0000945;2.16e-11;24!CL:0000542;7.06e-10;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,9.16e-16,14;CL:0000838,1.01e-12,52;CL:0000542,1.97e-12,53;CL:0000051,1.97e-12,53;CL:0000945,2.06e-11,24;CL:0000826,2.06e-11,24 | |||
|ontology_enrichment_development_v019=CL:0000051;7.06e-10;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!8.50e-09!18;UBERON:0004638!8.50e-09!18;UBERON:0004852!8.50e-09!18;UBERON:0003915!1.01e-07!9;UBERON:0004700!1.01e-07!9;UBERON:0001917!1.01e-07!9;UBERON:0006914!5.06e-07!25 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,2.18441372130172,0.527533956456907,0.247532705920093,0.662794751455832,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0.426507697462265,0,0,0.200544447470142,0.434021741431704,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,3.51992488922645,2.73069305631066,1.77901850772711,1.70692089026603,1.20118796110804,1.14950487990897,0.661044872784862,0,0.569212969109448,1.17447437874188,0.764546456250458,0,0,0,1.180258620683,0.393010762749165,0.822405995998037,8.52651126492458,0.651844533267181,0.473447805734733,0,2.22820913770347,0.294605907474837,0.886135578334485,0.812411591295047,2.17755243533648,1.95089021339817,3.12432018746985,4.42160028457357,8.11448640058147,0.741432815810302,0.802622484269139,2.09071047609954,8.61151004501503,0.766440987203842,2.40539211837841,0.759059076058509,1.27426165729639,0.651083453856419,0,0,0.511946444617674,1.24930726552346,0.236777252044017,0,0,0,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0.79504962946682,0.860234595106124,3.12426451446835,0.56530794192401,1.25849830862972,1.10047216776027,0.626984899610432,0,0,0,0.805658634218294,0,0,0.367663080345869,0,0.535798369704479,0,0.788280363383256,0,4.74632829784064,3.84723662253855,0,0,0,0,0.12663051166458,0,0.286836620748814,0.709336764396714,0,0,0,0,0,0.163461903113459,0,0,0.70296429550139,0,0.570471821544449,0,0,0,0.280901613404497,0,0.122834317311768,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0.0974370051611986,0,0.184099797284599,0,0,0.201504196455281,0.169560592310488,0,0,0,0,0,0.116193942869518,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0.241011029883482,0.110293972732394,0.435758888184812,0,0.134831308160164,0,0,0,7.01208869017229,0,0,0,0,0,1.7658523976586,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0.2933531432838,0,0,0,0.26593811658487,1.04007436911366,0.257207374262142,0,0,0.142977993658148,0,0.823240336780769,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0.579125226670317,0.821905290201534,0.895304816199478,0,0,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0.347534457872331,0.391602314925481,0,0.620304078368662,0.431428401637234,0.320182673410333,0.303127571446259,0,0,0,0,0,0,0,0,0,0.462629081407967,0.532685175939381,0.0821271560138091,0,0,0,0,0,0,0,0,0,0.15403067420883,0.784349769176855,1.46139224653261,0,0,0.340187410553031,0,0,0.541892875087706,1.00337954770971,0,0,0.223874754722178,0,0,0,0.328014645699706,0,0.206082023295445,0,0,0,0,0,1.06337790121334,0.308097234229289,0.15350367472613,0.137836572484531,0.644521469209642,0.435050081742686,0.255679882248303,0.356128142586949,0,0,0,0,0.464845549297286,0.31481234683064,0.6970372701606,0,0,0,0,0,0,0.632758849437452,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05650146756755,0,0.141405431953713,2.26016233240486,0,0.66343897524122,0,0,0,0,0,0.563391205064483,0,0.687743287091848,0,0.354761064070598,0.211107635297664,0.329294892959902,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0.238231775457789,0.822724546172388,0.648473311192717,0,0.79312517629427,0.106824071127473,0,0,0.185803175125719,0,3.91280138416278,0.797131363644112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71623345421307,0.296964680832639,0,0,0.140669416410513,0,0,0,0,0.276283915531148,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0.31900115973192,0,0,5.10966490978682,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,1.83309043480088,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99226682220855,0,0,0,0,0,1.0319161948297,0,0,0,0,0.0882561266915003,0.225980740780532,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0.787831823072237,0.576911008668165,0.808842526250219,0,0,0,0,0,0,0,0,0,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0,0.414239055347196,0.992332043623902,0,1.21792598380896,0,0,0,0,0,0,0,0.244052529803926,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0.149254802886874,0.233713309847224,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.60024988196838,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0.252071696221718,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0.460935950223117,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0.571812353413251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196300467230486,0.853425474875886,0,0.205325613712494,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0.169927114687817,0.563903507879121,0.644578879735772,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0.432626562123789,0,0.109265571963696,0.253397002022874,0,0,0,0,0,0,0,0,0,0,0.516711278688049,0.31037357147929,0.560659312903067,0,0,0,0,0.875576689189638,0,0,0,0,1.9307228228694,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p14@LIMS2 | |||
}} |
Latest revision as of 20:54, 16 September 2015
Short description: | p14@LIMS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_LIMS2_5end |
Coexpression cluster: | NA |
Association with transcript: | -68bp_to_ENST00000494613_5end |
EntrezGene: | LIMS2 |
HGNC: | 16084 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 9.16e-16 | 14 |
lymphoid lineage restricted progenitor cell | 1.01e-12 | 52 |
lymphocyte | 1.97e-12 | 53 |
common lymphoid progenitor | 1.97e-12 | 53 |
lymphocyte of B lineage | 2.06e-11 | 24 |
pro-B cell | 2.06e-11 | 24 |