FFCP PHASE1:Hg19::chr10:124895548..124895570,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=340784 | |EntrezGene=340784 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5019 | |HGNC=5019 | ||
|TSSclassifier=strong | |||
|UniProt=A6NHT5 | |UniProt=A6NHT5 | ||
|association_with_transcript=0bp_to_NM_001105574,uc010quc.1_5end | |association_with_transcript=0bp_to_NM_001105574,uc010quc.1_5end | ||
|cluster_id=chr10:124895548..124895570,+ | |||
|coexpression_cluster_id=C2043 | |coexpression_cluster_id=C2043 | ||
|description=CAGE_peak_2_at_HMX3_5end | |description=CAGE_peak_2_at_HMX3_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000946;2.70e-08;1!CL:0000786;2.70e-08;1!CL:0002379;7.45e-08;1 | |ontology_enrichment_celltype_v019=CL:0000946;2.70e-08;1!CL:0000786;2.70e-08;1!CL:0002379;7.45e-08;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.86e-09,177;CL:0000946,2.70e-08,1;CL:0000786,2.70e-08,1;CL:0000980,2.70e-08,1;CL:0002379,6.52e-08,1;CL:0000763,1.34e-07,108;CL:0000049,1.34e-07,108;CL:0002032,4.28e-07,161;CL:0000837,4.28e-07,161 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:8692!4.45e-15!31;DOID:1240!8.26e-15!39;DOID:2531!1.90e-13!51;DOID:0060083!1.90e-13!51;DOID:162!4.49e-11!235;DOID:14566!1.27e-10!239;DOID:1036!9.42e-09!8 | |ontology_enrichment_disease=DOID:8692!4.45e-15!31;DOID:1240!8.26e-15!39;DOID:2531!1.90e-13!51;DOID:0060083!1.90e-13!51;DOID:162!4.49e-11!235;DOID:14566!1.27e-10!239;DOID:1036!9.42e-09!8 | ||
|ontology_enrichment_disease_v019=DOID:8692;5.78e-32;31!DOID:1240;1.85e-20;39!DOID:2531;8.24e-14;51!DOID:0060083;8.24e-14;51!DOID:1036;2.32e-13;8!DOID:630;7.45e-08;1!DOID:0050177;7.45e-08;1!DOID:3620;7.45e-08;1!DOID:3565;7.45e-08;1!DOID:0050427;7.45e-08;1!DOID:2355;1.39e-07;1 | |ontology_enrichment_disease_v019=DOID:8692;5.78e-32;31!DOID:1240;1.85e-20;39!DOID:2531;8.24e-14;51!DOID:0060083;8.24e-14;51!DOID:1036;2.32e-13;8!DOID:630;7.45e-08;1!DOID:0050177;7.45e-08;1!DOID:3620;7.45e-08;1!DOID:3565;7.45e-08;1!DOID:0050427;7.45e-08;1!DOID:2355;1.39e-07;1 | ||
|ontology_enrichment_disease_v019_2=DOID:8692,5.52e-33,31;DOID:1240,1.05e-25,39;DOID:2531,3.67e-22,51;DOID:0060083,3.67e-22,51;DOID:1036,2.32e-13,8;DOID:0050686,3.38e-10,137;DOID:162,6.98e-09,235;DOID:14566,1.31e-08,239;DOID:630,6.10e-08,1;DOID:0050177,6.10e-08,1;DOID:0050427,6.10e-08,1;DOID:3620,6.52e-08,1;DOID:3565,6.52e-08,1;DOID:2355,1.64e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001737!5.57e-23!9;UBERON:0001557!4.43e-12!19 | |ontology_enrichment_uberon=UBERON:0001737!5.57e-23!9;UBERON:0001557!4.43e-12!19 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p2@HMX3 | |short_description=p2@HMX3 | ||
}} | }} |
Latest revision as of 21:03, 16 September 2015
Short description: | p2@HMX3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_HMX3_5end |
Coexpression cluster: | C2043_plasma_acute_biphenotypic_small_chronic_alveolar_cord |
Association with transcript: | 0bp_to_NM_001105574, uc010quc.1_5end |
EntrezGene: | HMX3 |
HGNC: | 5019 |
UniProt: | A6NHT5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.86e-09 | 177 |
antibody secreting cell | 2.70e-08 | 1 |
plasma cell | 2.70e-08 | 1 |
plasmablast | 2.70e-08 | 1 |
meningothelial cell | 6.52e-08 | 1 |
myeloid cell | 1.34e-07 | 108 |
common myeloid progenitor | 1.34e-07 | 108 |
hematopoietic oligopotent progenitor cell | 4.28e-07 | 161 |
hematopoietic multipotent progenitor cell | 4.28e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 5.52e-33 | 31 |
leukemia | 1.05e-25 | 39 |
hematologic cancer | 3.67e-22 | 51 |
immune system cancer | 3.67e-22 | 51 |
chronic leukemia | 2.32e-13 | 8 |
organ system cancer | 3.38e-10 | 137 |
cancer | 6.98e-09 | 235 |
disease of cellular proliferation | 1.31e-08 | 239 |
genetic disease | 6.10e-08 | 1 |
monogenic disease | 6.10e-08 | 1 |
xeroderma pigmentosum | 6.10e-08 | 1 |
central nervous system cancer | 6.52e-08 | 1 |
meningioma | 6.52e-08 | 1 |
anemia | 1.64e-07 | 1 |