FFCP PHASE1:Hg19::chr2:128408105..128408146,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55679 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16084 | |||
|TSSclassifier=strong | |||
|UniProt=Q7Z4I2,F8WEF3 | |||
|association_with_transcript=0bp_to_ENST00000409254,ENST00000413578_5end | |||
|cluster_id=chr2:128408105..128408146,- | |||
|description=CAGE_peak_9_at_LIMS2_5end | |||
|id=chr2:128408105..128408146,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0001014;6.03e-08;2!CL:0001016;6.03e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,6.07e-08,2;CL:0001016,6.07e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.80e-13;82!UBERON:0006241;1.04e-09;3!UBERON:0003057;1.04e-09;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;4.85e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,4.59e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.56e-79!115;UBERON:0001049!1.36e-39!57;UBERON:0005068!1.36e-39!57;UBERON:0006241!1.36e-39!57;UBERON:0007135!1.36e-39!57;UBERON:0002616!4.68e-33!59;UBERON:0002780!1.26e-31!41;UBERON:0001890!1.26e-31!41;UBERON:0006240!1.26e-31!41;UBERON:0002346!2.78e-31!90;UBERON:0003080!1.34e-30!42;UBERON:0001017!3.10e-30!82;UBERON:0005743!1.12e-29!86;UBERON:0003075!1.90e-29!86;UBERON:0007284!1.90e-29!86;UBERON:0000955!1.93e-28!69;UBERON:0006238!1.93e-28!69;UBERON:0001893!3.44e-28!34;UBERON:0002020!7.09e-28!34;UBERON:0003528!7.09e-28!34;UBERON:0000073!9.50e-28!94;UBERON:0001016!9.50e-28!94;UBERON:0002791!6.51e-27!33;UBERON:0001869!8.47e-26!32;UBERON:0002619!2.91e-21!22;UBERON:0001950!4.42e-19!20;UBERON:0003056!4.47e-19!61;UBERON:0000956!5.22e-18!25;UBERON:0000203!5.22e-18!25;UBERON:0000924!4.71e-14!173;UBERON:0006601!4.71e-14!173;UBERON:0000033!6.66e-14!123;UBERON:0000025!1.62e-13!194;UBERON:0000153!2.33e-13!129;UBERON:0007811!2.33e-13!129;UBERON:0004121!8.25e-13!169;UBERON:0002420!6.26e-12!9;UBERON:0007245!6.26e-12!9;UBERON:0010009!6.26e-12!9;UBERON:0010011!6.26e-12!9;UBERON:0000454!6.26e-12!9;UBERON:0002308!9.45e-12!9;UBERON:0000125!9.45e-12!9;UBERON:0004111!1.94e-11!241;UBERON:0003076!5.64e-10!15;UBERON:0003057!5.64e-10!15;UBERON:0009663!1.12e-09!7;UBERON:0000477!2.75e-09!286;UBERON:0000200!4.90e-09!6;UBERON:0001871!1.13e-08!7;UBERON:0002298!1.95e-08!8;UBERON:0000475!1.43e-07!365;UBERON:0000349!2.14e-07!5;UBERON:0000481!3.65e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;4.06e-30;34!UBERON:0002619;1.34e-29;22!UBERON:0001950;8.72e-29;20!UBERON:0002780;1.55e-28;41!UBERON:0001890;1.55e-28;41!UBERON:0001869;5.25e-28;32!UBERON:0002791;5.42e-28;32!UBERON:0000956;1.05e-25;25!UBERON:0000203;1.05e-25;25!UBERON:0003528;7.36e-25;34!UBERON:0002020;7.36e-25;34!UBERON:0000073;7.04e-23;53!UBERON:0002616;7.04e-23;53!UBERON:0007023;2.01e-18;114!UBERON:0000200;2.01e-17;6!UBERON:0000955;2.10e-14;68!UBERON:0001017;3.12e-14;75!UBERON:0001016;5.89e-12;83!UBERON:0001871;1.15e-10;6!UBERON:0002021;8.83e-10;5!UBERON:0001870;1.04e-09;3!UBERON:0002240;1.04e-09;3!UBERON:0005174;1.04e-09;3!UBERON:0001137;1.04e-09;3!UBERON:0002420;3.86e-08;9!UBERON:0007245;3.86e-08;9!UBERON:0010009;3.86e-08;9!UBERON:0010011;3.86e-08;9!UBERON:0000454;3.86e-08;9!UBERON:0009663;4.22e-07;7!UBERON:0002784;5.14e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,8.82e-57,114;UBERON:0001049,7.72e-49,56;UBERON:0005068,7.72e-49,56;UBERON:0006241,7.72e-49,56;UBERON:0007135,7.72e-49,56;UBERON:0000073,5.17e-42,53;UBERON:0002616,5.17e-42,53;UBERON:0002780,4.25e-41,41;UBERON:0001890,4.25e-41,41;UBERON:0003080,4.25e-41,41;UBERON:0006240,4.25e-41,41;UBERON:0001893,7.11e-36,34;UBERON:0003075,2.58e-35,82;UBERON:0007284,2.58e-35,82;UBERON:0001017,2.91e-35,81;UBERON:0002346,2.93e-33,86;UBERON:0000955,6.93e-33,68;UBERON:0006238,6.93e-33,68;UBERON:0001016,7.23e-33,89;UBERON:0001869,2.10e-31,32;UBERON:0002791,2.21e-31,32;UBERON:0002619,1.76e-29,22;UBERON:0003528,2.80e-29,34;UBERON:0002020,2.80e-29,34;UBERON:0001950,1.28e-28,20;UBERON:0003056,5.69e-28,61;UBERON:0010371,5.79e-26,104;UBERON:0000956,1.33e-25,25;UBERON:0000203,1.33e-25,25;UBERON:0010314,2.22e-21,132;UBERON:0000200,2.30e-17,6;UBERON:0004121,2.72e-16,171;UBERON:0000924,2.72e-16,171;UBERON:0006601,2.72e-16,171;UBERON:0011216,1.98e-15,223;UBERON:0000025,1.08e-14,192;UBERON:0004111,1.65e-11,240;UBERON:0001871,1.32e-10,6;UBERON:0002240,4.93e-10,3;UBERON:0005174,4.93e-10,3;UBERON:0001137,4.93e-10,3;UBERON:0001870,6.69e-10,3;UBERON:0002021,1.45e-09,5;UBERON:0003076,3.07e-09,15;UBERON:0003057,3.07e-09,15;UBERON:0002420,2.74e-08,9;UBERON:0007245,2.74e-08,9;UBERON:0010009,2.74e-08,9;UBERON:0010011,2.74e-08,9;UBERON:0000454,2.74e-08,9;UBERON:0009663,3.10e-07,7;UBERON:0000483,5.91e-07,306;UBERON:0002784,6.27e-07,4;UBERON:0002702,7.01e-07,2;UBERON:0003135,7.12e-07,11;UBERON:0000119,8.47e-07,309 | |||
|phase1_expression=0.54503513781167,0.856402095563933,1.12763523276777,0,0,0,2.53299878168311,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414644220061482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.63497894292169,0,3.51652341630141,0,2.46785982487976,7.80891950394185,0.285826432630578,0,0,0,0,3.57656445851882,0,0,0,0,0,0,0.857867961948885,5.96883765930587,0,0,1.06617584622764,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.24538298343828,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,0,0,0,0,0,0,0.767309866440312,0.280660094433074,0.640695746278505,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0.994147647766298,1.54736358051564,0,0,0,0.996239941255349,0.552567831062295,0,0,0,0,0,0,0,0.295930216910801,0,0,0,1.66982576691332,0,0,0,0,0,0,0,0,0,0,1.77148277162768,0.723578631752448,0,0.774054819518572,2.36438095162838,2.19385397153973,0,0,0.307801034015188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,2.0345239835768,0,0,0,0,1.28062152663286,0,1.40558667435203,0,0,0,2.76209081994573,2.41981432097328,0,0.884612114798832,0,0,0,0,0,0,0,0,0,0,0,7.5132467344073,0,0,0,0,0.678923115418936,0,0.451961481561065,0,0,3.48209377757333,0,0,1.70762395791482,0,0,0,0,0,0,0,0,0.104602846312333,0,0,1.80126086612937,0.684526894459965,0,0,0,1.67569440763353,0.916641696046735,0.717873024576814,1.39775300349294,2.57535628881943,0.669514372325618,0.53746777989381,0.360299883542404,1.16495949527454,0.0787831823072236,0.247247575143499,0.13480708770837,0,0,0.795229689809303,1.63444087333891,0,0,0,6.97419063809651,11.6070293183692,2.30848315300494,0,0.788057072991982,0.314727528809989,0,0,0,0.714695326373367,0.662091970365432,0,0,0,0,0,0,0,0.113312091520126,0.146552233678082,0,0.904980694530854,0.92562821219883,0,0,1.49502377594773,0.78602152549833,4.55662960881915,0,0,0,0,0,0.2506898940227,0,0.327872630709804,0,1.77213635993397,1.09823638411767,1.502291168478,1.14681839138014,0.887432412294818,4.22255540001407,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52084279766904,0,0.664324201566815,0.490696182767533,0,0,0,0,0,0,0,0,0,0,0,0,0.314531883711793,0,0.33946505990805,0.425149840203366,0,1.11728983594649,0,0,0,0,0,2.11956442818316,1.41696576325585,1.27707087245721,1.23069818544453,0,3.45786262321089,1.45328081068666,0,0,0,0,0,0,0,0.795664888465099,0.300841313397029,0,0,0,0,0,2.09366512317023,0.781078098613847,0.620060389503552,1.33173201407204,0,0,1.98484471355718,0.879356221798103,0,1.60710550763486,1.00885116665647,0,0,0.0887023701626388,0,0,2.03909198930495,2.23627430113687,0,0,0.549451649953598,0.942693539496011,0,0,0,0,3.35939757630285,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,1.94228651156368,0.513314034281235,0,0,0,0,0,0,0,0,1.23478652972711,0.437119121007915,0,1.22574160876953,0,1.76677620403451,1.78227840196252,3.3812458206672,0.169927114687817,1.2217909337381,0.902410431630081,0,0,0,0,0.730336388246517,0,2.00675416412032,0,3.67154047030939,0,0,0.371995018166751,0,1.73050624849516,0,0,0,0,0,0,0,1.74291005901951,1.33982065078089,1.65833887891756,0.724030971033267,0.852935927603924,0,0,0,0,0.25458863311266,0.404234377916439,2.17716747896961,0.342233301085281,0.404112318087525,0.358611026963382,0.665320713092027,0,0,0,0,0,0.488965776731466,0,0.665756774185513,0.402547587182052,0 | |||
|short_description=p9@LIMS2 | |||
}} |
Latest revision as of 21:05, 16 September 2015
Short description: | p9@LIMS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_LIMS2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000409254, ENST00000413578_5end |
EntrezGene: | LIMS2 |
HGNC: | 16084 |
UniProt: | Q7Z4I2F8WEF3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 6.07e-08 | 2 |
immature CD1a-positive Langerhans cell | 6.07e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
heart disease | 4.59e-07 | 2 |