FFCP PHASE1:Hg19::chr6:167536616..167536629,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1235 | |EntrezGene=1235 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1607 | |HGNC=1607 | ||
|TSSclassifier=strong | |||
|UniProt=P51684 | |UniProt=P51684 | ||
|association_with_transcript=359bp_to_ENST00000341935_5end | |association_with_transcript=359bp_to_ENST00000341935_5end | ||
|cluster_id=chr6:167536616..167536629,+ | |||
|coexpression_cluster_id=C80 | |||
|description=CAGE_peak_7_at_CCR6_5end | |description=CAGE_peak_7_at_CCR6_5end | ||
|id=chr6:167536616..167536629,+ | |id=chr6:167536616..167536629,+ | ||
|ontology_enrichment_celltype=CL:0000945!5.07e-18!24;CL:0000826!5.07e-18!24;CL:0000236!3.92e-17!14;CL:0000838!1.17e-11!52;CL:0000542!2.24e-11!53;CL:0000051!2.24e-11!53;CL:0000840!6.90e-11!5;CL:0001029!6.90e-11!5;CL:0001014!1.78e-09!2;CL:0001016!1.78e-09!2;CL:0002031!1.09e-07!124;CL:0000990!2.96e-07!8;CL:0000037!3.60e-07!172;CL:0000566!3.60e-07!172;CL:0000738!4.11e-07!140;CL:0002087!4.21e-07!119;CL:0002032!6.51e-07!165;CL:0000837!6.51e-07!165 | |ontology_enrichment_celltype=CL:0000945!5.07e-18!24;CL:0000826!5.07e-18!24;CL:0000236!3.92e-17!14;CL:0000838!1.17e-11!52;CL:0000542!2.24e-11!53;CL:0000051!2.24e-11!53;CL:0000840!6.90e-11!5;CL:0001029!6.90e-11!5;CL:0001014!1.78e-09!2;CL:0001016!1.78e-09!2;CL:0002031!1.09e-07!124;CL:0000990!2.96e-07!8;CL:0000037!3.60e-07!172;CL:0000566!3.60e-07!172;CL:0000738!4.11e-07!140;CL:0002087!4.21e-07!119;CL:0002032!6.51e-07!165;CL:0000837!6.51e-07!165 | ||
|ontology_enrichment_celltype_v019=CL:0001014;2.03e-45;2!CL:0001016;2.03e-45;2!CL:0000945;8.88e-33;24!CL:0000236;2.34e-27;13!CL:0000453;7.24e-19;5!CL:0000840;6.71e-16;5!CL:0000542;1.16e-11;53!CL:0000990;6.22e-11;8!CL:0000451;4.08e-09;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,2.04e-45,2;CL:0001016,2.04e-45,2;CL:0000945,9.66e-33,24;CL:0000826,9.66e-33,24;CL:0000236,1.74e-25,14;CL:0000453,7.24e-19,5;CL:0000840,6.71e-16,5;CL:0001029,6.71e-16,5;CL:0000838,3.46e-15,52;CL:0000542,6.68e-15,53;CL:0000051,6.68e-15,53;CL:0002031,1.86e-11,120;CL:0000990,6.22e-11,8;CL:0002032,8.68e-11,161;CL:0000837,8.68e-11,161;CL:0000037,2.50e-10,168;CL:0000738,4.34e-10,136;CL:0000988,8.62e-10,177;CL:0000451,4.08e-09,10;CL:0002087,8.75e-07,115 | |||
|ontology_enrichment_development_v019=CL:0000051;1.16e-11;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001042!6.40e-09!10;UBERON:0009145!6.40e-09!10;UBERON:0002370!1.71e-08!4;UBERON:0005058!1.71e-08!4;UBERON:0009113!1.71e-08!4;UBERON:0003295!1.71e-08!4;UBERON:0005562!1.71e-08!4;UBERON:0004177!3.09e-08!7;UBERON:0006562!4.40e-08!11 | |ontology_enrichment_uberon=UBERON:0001042!6.40e-09!10;UBERON:0009145!6.40e-09!10;UBERON:0002370!1.71e-08!4;UBERON:0005058!1.71e-08!4;UBERON:0009113!1.71e-08!4;UBERON:0003295!1.71e-08!4;UBERON:0005562!1.71e-08!4;UBERON:0004177!3.09e-08!7;UBERON:0006562!4.40e-08!11 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p7@CCR6 | |short_description=p7@CCR6 | ||
}} | }} |
Latest revision as of 21:10, 16 September 2015
Short description: | p7@CCR6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_CCR6_5end |
Coexpression cluster: | C80_immature_migratory_CD14_Dendritic_splenic_cord_Mast |
Association with transcript: | 359bp_to_ENST00000341935_5end |
EntrezGene: | CCR6 |
HGNC: | 1607 |
UniProt: | P51684 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 2.04e-45 | 2 |
immature CD1a-positive Langerhans cell | 2.04e-45 | 2 |
lymphocyte of B lineage | 9.66e-33 | 24 |
pro-B cell | 9.66e-33 | 24 |
B cell | 1.74e-25 | 14 |
Langerhans cell | 7.24e-19 | 5 |
immature conventional dendritic cell | 6.71e-16 | 5 |
common dendritic progenitor | 6.71e-16 | 5 |
lymphoid lineage restricted progenitor cell | 3.46e-15 | 52 |
lymphocyte | 6.68e-15 | 53 |
common lymphoid progenitor | 6.68e-15 | 53 |
hematopoietic lineage restricted progenitor cell | 1.86e-11 | 120 |
conventional dendritic cell | 6.22e-11 | 8 |
hematopoietic oligopotent progenitor cell | 8.68e-11 | 161 |
hematopoietic multipotent progenitor cell | 8.68e-11 | 161 |
hematopoietic stem cell | 2.50e-10 | 168 |
leukocyte | 4.34e-10 | 136 |
hematopoietic cell | 8.62e-10 | 177 |
dendritic cell | 4.08e-09 | 10 |
nongranular leukocyte | 8.75e-07 | 115 |