FFCP PHASE1:Hg19::chr13:24844819..24844836,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=221178 | |EntrezGene=221178 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23222 | |HGNC=23222 | ||
|TSSclassifier=strong | |||
|UniProt=Q96N96 | |UniProt=Q96N96 | ||
|association_with_transcript=0bp_to_ENST00000399949_5end | |association_with_transcript=0bp_to_ENST00000399949_5end | ||
|cluster_id=chr13:24844819..24844836,+ | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_9_at_SPATA13_5end | |description=CAGE_peak_9_at_SPATA13_5end | ||
|id=chr13:24844819..24844836,+ | |id=chr13:24844819..24844836,+ | ||
|ontology_enrichment_celltype=CL:0000766!1.93e-61!76;CL:0002057!9.58e-60!42;CL:0000860!1.04e-54!45;CL:0000557!4.18e-54!71;CL:0000839!1.59e-52!70;CL:0000738!7.30e-50!140;CL:0002009!3.71e-48!65;CL:0000763!8.30e-46!112;CL:0000049!8.30e-46!112;CL:0002194!1.31e-45!63;CL:0000576!1.31e-45!63;CL:0000040!1.31e-45!63;CL:0000559!1.31e-45!63;CL:0000037!1.77e-39!172;CL:0000566!1.77e-39!172;CL:0000988!4.27e-38!182;CL:0002031!2.05e-37!124;CL:0002032!8.76e-36!165;CL:0000837!8.76e-36!165;CL:0002087!5.39e-32!119;CL:0002393!4.86e-13!9;CL:0002397!4.86e-13!9;CL:0000094!7.53e-10!8;CL:0002274!1.16e-08!5;CL:0000457!1.16e-08!5;CL:0002191!1.16e-08!5;CL:0000097!1.16e-08!5;CL:0000831!1.16e-08!5;CL:0002028!1.16e-08!5;CL:0000134!7.19e-08!358;CL:0002320!2.41e-07!365;CL:0000451!6.38e-07!10;CL:0000081!9.67e-07!11 | |ontology_enrichment_celltype=CL:0000766!1.93e-61!76;CL:0002057!9.58e-60!42;CL:0000860!1.04e-54!45;CL:0000557!4.18e-54!71;CL:0000839!1.59e-52!70;CL:0000738!7.30e-50!140;CL:0002009!3.71e-48!65;CL:0000763!8.30e-46!112;CL:0000049!8.30e-46!112;CL:0002194!1.31e-45!63;CL:0000576!1.31e-45!63;CL:0000040!1.31e-45!63;CL:0000559!1.31e-45!63;CL:0000037!1.77e-39!172;CL:0000566!1.77e-39!172;CL:0000988!4.27e-38!182;CL:0002031!2.05e-37!124;CL:0002032!8.76e-36!165;CL:0000837!8.76e-36!165;CL:0002087!5.39e-32!119;CL:0002393!4.86e-13!9;CL:0002397!4.86e-13!9;CL:0000094!7.53e-10!8;CL:0002274!1.16e-08!5;CL:0000457!1.16e-08!5;CL:0002191!1.16e-08!5;CL:0000097!1.16e-08!5;CL:0000831!1.16e-08!5;CL:0002028!1.16e-08!5;CL:0000134!7.19e-08!358;CL:0002320!2.41e-07!365;CL:0000451!6.38e-07!10;CL:0000081!9.67e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.59e-58;33!CL:0002057;1.59e-58;33!CL:0000473;3.17e-46;39!CL:0000234;3.17e-46;39!CL:0000766;4.52e-37;69!CL:0000576;2.80e-32;48!CL:0000097;3.21e-14;5!CL:0000094;1.75e-13;8!CL:0000763;4.86e-11;100!CL:0000081;1.01e-09;11!CL:0002087;4.87e-09;104!CL:0000738;4.87e-09;136!CL:0000163;6.37e-08;9!CL:0000775;9.45e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,7.21e-73,72;CL:0000860,2.44e-68,42;CL:0002057,2.44e-68,42;CL:0000473,9.16e-64,48;CL:0000234,9.16e-64,48;CL:0000557,2.97e-61,67;CL:0000839,1.86e-58,66;CL:0002009,2.06e-51,61;CL:0002194,1.19e-49,59;CL:0000576,1.19e-49,59;CL:0000040,1.19e-49,59;CL:0000559,1.19e-49,59;CL:0000763,8.49e-49,108;CL:0000049,8.49e-49,108;CL:0000738,4.15e-37,136;CL:0002031,4.69e-31,120;CL:0002032,4.40e-30,161;CL:0000837,4.40e-30,161;CL:0000037,1.73e-28,168;CL:0000988,1.28e-26,177;CL:0002087,2.07e-22,115;CL:0000097,5.73e-14,5;CL:0002028,5.73e-14,5;CL:0000094,1.85e-13,8;CL:0000081,1.05e-09,11;CL:0000134,3.73e-09,354;CL:0002320,8.12e-09,361;CL:0000163,8.69e-08,9;CL:0000219,1.25e-07,386;CL:0002393,2.00e-07,9;CL:0002397,2.00e-07,9;CL:0000775,8.94e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.70e-51;42!CL:0000049;1.10e-12;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.25e-49!102;UBERON:0003061!3.25e-49!102;UBERON:0002371!6.37e-46!80;UBERON:0002193!6.82e-43!112;UBERON:0001474!2.00e-41!86;UBERON:0004765!7.10e-34!101;UBERON:0001434!7.10e-34!101;UBERON:0002405!8.40e-34!115;UBERON:0002204!5.76e-15!167;UBERON:0003081!1.57e-14!216;UBERON:0001049!2.29e-13!57;UBERON:0005068!2.29e-13!57;UBERON:0006241!2.29e-13!57;UBERON:0007135!2.29e-13!57;UBERON:0007023!2.95e-11!115;UBERON:0002616!1.77e-10!59;UBERON:0002780!3.34e-10!41;UBERON:0001890!3.34e-10!41;UBERON:0006240!3.34e-10!41;UBERON:0003080!7.91e-10!42;UBERON:0000955!2.08e-09!69;UBERON:0006238!2.08e-09!69;UBERON:0001017!5.47e-09!82;UBERON:0001893!2.64e-08!34;UBERON:0002020!2.84e-08!34;UBERON:0003528!2.84e-08!34;UBERON:0005743!3.34e-08!86;UBERON:0000073!6.22e-08!94;UBERON:0001016!6.22e-08!94;UBERON:0002791!1.10e-07!33;UBERON:0003075!1.17e-07!86;UBERON:0007284!1.17e-07!86;UBERON:0002346!1.45e-07!90;UBERON:0002384!4.93e-07!375 | |ontology_enrichment_uberon=UBERON:0002390!3.25e-49!102;UBERON:0003061!3.25e-49!102;UBERON:0002371!6.37e-46!80;UBERON:0002193!6.82e-43!112;UBERON:0001474!2.00e-41!86;UBERON:0004765!7.10e-34!101;UBERON:0001434!7.10e-34!101;UBERON:0002405!8.40e-34!115;UBERON:0002204!5.76e-15!167;UBERON:0003081!1.57e-14!216;UBERON:0001049!2.29e-13!57;UBERON:0005068!2.29e-13!57;UBERON:0006241!2.29e-13!57;UBERON:0007135!2.29e-13!57;UBERON:0007023!2.95e-11!115;UBERON:0002616!1.77e-10!59;UBERON:0002780!3.34e-10!41;UBERON:0001890!3.34e-10!41;UBERON:0006240!3.34e-10!41;UBERON:0003080!7.91e-10!42;UBERON:0000955!2.08e-09!69;UBERON:0006238!2.08e-09!69;UBERON:0001017!5.47e-09!82;UBERON:0001893!2.64e-08!34;UBERON:0002020!2.84e-08!34;UBERON:0003528!2.84e-08!34;UBERON:0005743!3.34e-08!86;UBERON:0000073!6.22e-08!94;UBERON:0001016!6.22e-08!94;UBERON:0002791!1.10e-07!33;UBERON:0003075!1.17e-07!86;UBERON:0007284!1.17e-07!86;UBERON:0002346!1.45e-07!90;UBERON:0002384!4.93e-07!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.39e-53,76;UBERON:0001474,8.53e-49,82;UBERON:0002405,4.58e-45,93;UBERON:0004765,7.89e-44,90;UBERON:0002390,2.15e-42,98;UBERON:0003061,2.15e-42,98;UBERON:0001434,9.97e-39,100;UBERON:0002193,8.76e-38,108;UBERON:0002204,3.19e-20,167;UBERON:0003081,1.52e-16,203;UBERON:0002384,2.34e-08,371;UBERON:0000926,5.60e-08,315;UBERON:0004120,5.60e-08,315;UBERON:0006603,5.60e-08,315 | |||
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|short_description=p9@SPATA13 | |short_description=p9@SPATA13 | ||
}} | }} |
Latest revision as of 21:23, 16 September 2015
Short description: | p9@SPATA13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_SPATA13_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | 0bp_to_ENST00000399949_5end |
EntrezGene: | SPATA13 |
HGNC: | 23222 |
UniProt: | Q96N96 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.39e-53 | 76 |
bone element | 8.53e-49 | 82 |
immune system | 4.58e-45 | 93 |
skeletal element | 7.89e-44 | 90 |
hematopoietic system | 2.15e-42 | 98 |
blood island | 2.15e-42 | 98 |
skeletal system | 9.97e-39 | 100 |
hemolymphoid system | 8.76e-38 | 108 |
musculoskeletal system | 3.19e-20 | 167 |
lateral plate mesoderm | 1.52e-16 | 203 |
connective tissue | 2.34e-08 | 371 |
mesoderm | 5.60e-08 | 315 |
mesoderm-derived structure | 5.60e-08 | 315 |
presumptive mesoderm | 5.60e-08 | 315 |