FFCP PHASE1:Hg19::chr13:25254545..25254550,+: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr13:25254545..25254550,+ to FFCP PHASE1:Hg19::chr13:25254545..25254550,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=479 | |EntrezGene=479 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13816 | |HGNC=13816 | ||
|TSSclassifier=strong | |||
|UniProt=B4E0R9,P54707 | |UniProt=B4E0R9,P54707 | ||
|association_with_transcript=0bp_to_ENST00000218548,NM_001185085,NM_001676_5end | |||
|cluster_id=chr13:25254545..25254550,+ | |||
|coexpression_cluster_id=C157 | |||
|description=CAGE_peak_1_at_ATP12A_5end | |||
|id=chr13:25254545..25254550,+ | |||
|ontology_enrichment_celltype=CL:0002076!2.94e-14!43;CL:0000039!1.87e-10!7;CL:0000586!1.87e-10!7;CL:0002368!2.26e-10!13;CL:0000622!1.39e-09!5;CL:0002322!6.05e-09!5;CL:0000223!8.23e-09!59;CL:0000154!6.76e-08!6;CL:0002251!1.05e-07!21 | |||
|ontology_enrichment_celltype_v019=CL:0000039;1.21e-15;7!CL:0000586;1.21e-15;7!CL:0000317;2.93e-09;2!CL:1000448;2.93e-09;2!CL:0002308;2.93e-09;2!CL:0002140;2.93e-09;2!CL:0000575;9.05e-09;2!CL:0000622;3.00e-08;5!CL:0002368;1.17e-07;13!CL:0002159;4.61e-07;14!CL:0000154;6.15e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.26e-15,7;CL:0000586,1.26e-15,7;CL:0000317,3.84e-09,2;CL:1000448,3.84e-09,2;CL:0002308,3.84e-09,2;CL:0002140,3.84e-09,2;CL:0000575,1.65e-08,2;CL:0000622,3.52e-08,5;CL:0002368,1.15e-07,13;CL:0002159,6.11e-07,14;CL:0000154,7.02e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0009117;3.01e-07;10!UBERON:0005564;3.01e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001004!1.92e-11!72;UBERON:0004119!1.97e-11!169;UBERON:0000925!1.97e-11!169;UBERON:0006595!1.97e-11!169;UBERON:0003135!3.84e-10!11;UBERON:0000065!3.78e-09!53;UBERON:0000473!1.22e-08!8;UBERON:0003101!6.88e-08!22;UBERON:0000079!6.88e-08!22;UBERON:0001987!3.62e-07!4;UBERON:0004340!3.62e-07!4;UBERON:0005631!6.65e-07!14;UBERON:0000158!6.65e-07!14;UBERON:0005178!9.28e-07!34;UBERON:0002224!9.28e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0003127;4.00e-10;2!UBERON:0000341;1.23e-09;2!UBERON:0002419;2.93e-09;2!UBERON:0007771;2.93e-09;2!UBERON:0003297;2.93e-09;2!UBERON:0001821;2.93e-09;2!UBERON:0003487;2.93e-09;2!UBERON:0001820;2.93e-09;2!UBERON:0000922;4.05e-09;49!UBERON:0000473;4.61e-09;8!UBERON:0005178;1.31e-07;34!UBERON:0002224;1.31e-07;34!UBERON:0005181;3.12e-07;35!UBERON:0007196;6.20e-07;15!UBERON:0001558;6.20e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,4.00e-10,2;UBERON:0000341,1.18e-09,2;UBERON:0002419,3.84e-09,2;UBERON:0007771,3.84e-09,2;UBERON:0003297,3.84e-09,2;UBERON:0001821,3.84e-09,2;UBERON:0003487,3.84e-09,2;UBERON:0001820,3.84e-09,2;UBERON:0005089,3.84e-09,2;UBERON:0005088,3.84e-09,2;UBERON:0000473,4.91e-09,8;UBERON:0000065,1.46e-08,54;UBERON:0005178,2.03e-08,34;UBERON:0002224,2.03e-08,34;UBERON:0005181,3.92e-08,35;UBERON:0004119,3.00e-07,160;UBERON:0000925,3.00e-07,160;UBERON:0006595,3.00e-07,160;UBERON:0007196,5.85e-07,15;UBERON:0001558,5.85e-07,15;UBERON:0001004,9.36e-07,74 | |||
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| ||
|short_description=p1@ATP12A | |||
}} | }} |
Latest revision as of 21:34, 16 September 2015
Short description: | p1@ATP12A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ATP12A_5end |
Coexpression cluster: | C157_testicular_H9_testis_iPS_teratocarcinoma_colon_trachea |
Association with transcript: | 0bp_to_ENST00000218548, NM_001185085, NM_001676_5end |
EntrezGene: | ATP12A |
HGNC: | 13816 |
UniProt: | B4E0R9P54707 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.26e-15 | 7 |
germ cell | 1.26e-15 | 7 |
sebum secreting cell | 3.84e-09 | 2 |
epithelial cell of sweat gland | 3.84e-09 | 2 |
epithelial cell of skin gland | 3.84e-09 | 2 |
acinar cell of sebaceous gland | 3.84e-09 | 2 |
corneal epithelial cell | 1.65e-08 | 2 |
acinar cell | 3.52e-08 | 5 |
respiratory epithelial cell | 1.15e-07 | 13 |
general ecto-epithelial cell | 6.11e-07 | 14 |
protein secreting cell | 7.02e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 4.00e-10 | 2 |
throat | 1.18e-09 | 2 |
skin gland | 3.84e-09 | 2 |
epidermis gland | 3.84e-09 | 2 |
gland of integumental system | 3.84e-09 | 2 |
sebaceous gland | 3.84e-09 | 2 |
skin sebaceous gland | 3.84e-09 | 2 |
sweat gland | 3.84e-09 | 2 |
sweat gland placode | 3.84e-09 | 2 |
sebaceous gland placode | 3.84e-09 | 2 |
testis | 4.91e-09 | 8 |
respiratory tract | 1.46e-08 | 54 |
thoracic cavity element | 2.03e-08 | 34 |
thoracic cavity | 2.03e-08 | 34 |
thoracic segment organ | 3.92e-08 | 35 |
endoderm-derived structure | 3.00e-07 | 160 |
endoderm | 3.00e-07 | 160 |
presumptive endoderm | 3.00e-07 | 160 |
tracheobronchial tree | 5.85e-07 | 15 |
lower respiratory tract | 5.85e-07 | 15 |
respiratory system | 9.36e-07 | 74 |