FFCP PHASE1:Hg19::chr1:245270498..245270509,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84288 | |EntrezGene=84288 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28166 | |HGNC=28166 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=17bp_to_ENST00000479923_5end | |association_with_transcript=17bp_to_ENST00000479923_5end | ||
|cluster_id=chr1:245270498..245270509,+ | |||
|coexpression_cluster_id=C34 | |coexpression_cluster_id=C34 | ||
|description=CAGE_peak_16_at_EFCAB2_5end | |description=CAGE_peak_16_at_EFCAB2_5end | ||
|id=chr1:245270498..245270509,+ | |id=chr1:245270498..245270509,+ | ||
|ontology_enrichment_celltype=CL:0002541!3.62e-17!3;CL:0002274!4.00e-10!5;CL:0000457!4.00e-10!5;CL:0002191!4.00e-10!5;CL:0000097!4.00e-10!5;CL:0000831!4.00e-10!5;CL:0002028!4.00e-10!5 | |ontology_enrichment_celltype=CL:0002541!3.62e-17!3;CL:0002274!4.00e-10!5;CL:0000457!4.00e-10!5;CL:0002191!4.00e-10!5;CL:0000097!4.00e-10!5;CL:0000831!4.00e-10!5;CL:0002028!4.00e-10!5 | ||
|ontology_enrichment_celltype_v019=CL:0002541;1.64e-38;3!CL:0000349;6.10e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,2.18e-38,3;CL:0000349,6.38e-07,19 | |||
|ontology_enrichment_development_v019=UBERON:0003124;7.48e-30;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000476!3.62e-17!3;UBERON:0000920!3.62e-17!3;UBERON:0003124!7.22e-13!7;UBERON:0007499!8.10e-07!25;UBERON:0009497!9.99e-07!25;UBERON:0000015!9.99e-07!25;UBERON:0002423!9.99e-07!25;UBERON:0006235!9.99e-07!25;UBERON:0004161!9.99e-07!25 | |ontology_enrichment_uberon=UBERON:0000476!3.62e-17!3;UBERON:0000920!3.62e-17!3;UBERON:0003124!7.22e-13!7;UBERON:0007499!8.10e-07!25;UBERON:0009497!9.99e-07!25;UBERON:0000015!9.99e-07!25;UBERON:0002423!9.99e-07!25;UBERON:0006235!9.99e-07!25;UBERON:0004161!9.99e-07!25 | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;1.64e-38;3!UBERON:0000920;1.64e-38;3!UBERON:0005631;2.44e-12;10!UBERON:0000158;2.44e-12;10!UBERON:0000478;2.15e-11;24!UBERON:0001987;1.70e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,2.18e-38,3;UBERON:0003124,5.57e-37,7;UBERON:0005631,6.09e-19,14;UBERON:0000158,6.09e-19,14;UBERON:0000478,2.27e-11,24;UBERON:0001987,1.70e-08,4;UBERON:0004340,1.70e-08,4 | |||
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|short_description=p16@EFCAB2 | |short_description=p16@EFCAB2 | ||
}} | }} |
Latest revision as of 21:44, 16 September 2015
Short description: | p16@EFCAB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_EFCAB2_5end |
Coexpression cluster: | C34_placenta_chorionic_choriocarcinoma_mesothelioma_Wilms_Smooth_bile |
Association with transcript: | 17bp_to_ENST00000479923_5end |
EntrezGene: | EFCAB2 |
HGNC: | 28166 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 2.18e-38 | 3 |
extraembryonic cell | 6.38e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 2.18e-38 | 3 |
chorion | 5.57e-37 | 7 |
extraembryonic membrane | 6.09e-19 | 14 |
membranous layer | 6.09e-19 | 14 |
extraembryonic structure | 2.27e-11 | 24 |
placenta | 1.70e-08 | 4 |
allantois | 1.70e-08 | 4 |