FFCP PHASE1:Hg19::chr1:150230291..150230323,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23632 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1372 | |||
|TSSclassifier=strong | |||
|UniProt=A8K3J4,Q9ULX7 | |||
|association_with_transcript=73bp_to_NM_012113,uc001etx.2,uc009wln.2_5end | |||
|cluster_id=chr1:150230291..150230323,+ | |||
|coexpression_cluster_id=C1249 | |||
|description=CAGE_peak_3_at_CA14_5end | |||
|id=chr1:150230291..150230323,+ | |||
|ontology_enrichment_celltype=CL:0000148!8.64e-16!10;CL:0000541!8.64e-16!10;CL:0000147!5.86e-15!14;CL:0002322!9.07e-08!5;CL:0000710!9.54e-08!20;CL:0000133!5.45e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000148;1.05e-23;10!CL:0000147;6.11e-23;14!CL:0002322;1.87e-11;5!CL:0000710;1.01e-10;20!CL:0000075;7.15e-09;27!CL:0002567;4.44e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,9.96e-24,10;CL:0000541,9.96e-24,10;CL:0000147,6.21e-23,14;CL:0002322,3.13e-11,5;CL:0000710,9.84e-11,20;CL:0000075,6.71e-09,27;CL:0002567,3.88e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.34e-13;82!UBERON:0006241;1.30e-08;3!UBERON:0003057;1.30e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.43e-49!115;UBERON:0000073!5.28e-48!94;UBERON:0001016!5.28e-48!94;UBERON:0005743!3.76e-47!86;UBERON:0001049!1.42e-46!57;UBERON:0005068!1.42e-46!57;UBERON:0006241!1.42e-46!57;UBERON:0007135!1.42e-46!57;UBERON:0001017!3.10e-44!82;UBERON:0003075!4.08e-40!86;UBERON:0007284!4.08e-40!86;UBERON:0002346!5.02e-39!90;UBERON:0002616!1.95e-37!59;UBERON:0002780!4.94e-35!41;UBERON:0001890!4.94e-35!41;UBERON:0006240!4.94e-35!41;UBERON:0000955!1.12e-34!69;UBERON:0006238!1.12e-34!69;UBERON:0003080!6.05e-34!42;UBERON:0001893!4.23e-31!34;UBERON:0002020!6.58e-31!34;UBERON:0003528!6.58e-31!34;UBERON:0002791!8.23e-30!33;UBERON:0001869!4.23e-28!32;UBERON:0003056!7.04e-28!61;UBERON:0004121!3.61e-27!169;UBERON:0000924!5.51e-27!173;UBERON:0006601!5.51e-27!173;UBERON:0000153!1.71e-23!129;UBERON:0007811!1.71e-23!129;UBERON:0000033!2.75e-23!123;UBERON:0000956!6.59e-20!25;UBERON:0000203!6.59e-20!25;UBERON:0001950!4.13e-19!20;UBERON:0002619!4.60e-19!22;UBERON:0003076!2.16e-13!15;UBERON:0003057!2.16e-13!15;UBERON:0002308!6.59e-13!9;UBERON:0000125!6.59e-13!9;UBERON:0002420!2.72e-12!9;UBERON:0007245!2.72e-12!9;UBERON:0010009!2.72e-12!9;UBERON:0010011!2.72e-12!9;UBERON:0000454!2.72e-12!9;UBERON:0004732!9.94e-11!13;UBERON:0000025!2.59e-10!194;UBERON:0009663!3.10e-10!7;UBERON:0002298!4.59e-10!8;UBERON:0004111!7.22e-10!241;UBERON:0004733!2.75e-09!12;UBERON:0002028!2.75e-09!12;UBERON:0007277!2.75e-09!12;UBERON:0000200!1.04e-08!6;UBERON:0000064!4.82e-08!219;UBERON:0000477!6.59e-08!286;UBERON:0002021!9.07e-08!5;UBERON:0000483!1.16e-07!309;UBERON:0000119!1.99e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;9.04e-18;34!UBERON:0000073;6.11e-17;53!UBERON:0002616;6.11e-17;53!UBERON:0003528;2.08e-16;34!UBERON:0002020;2.08e-16;34!UBERON:0002780;1.75e-15;41!UBERON:0001890;1.75e-15;41!UBERON:0001869;3.43e-15;32!UBERON:0002298;5.03e-15;6!UBERON:0002791;6.24e-15;32!UBERON:0001017;4.14e-14;75!UBERON:0001950;1.60e-13;20!UBERON:0000125;1.35e-12;9!UBERON:0002308;1.35e-12;9!UBERON:0002619;4.15e-12;22!UBERON:0001016;9.06e-12;83!UBERON:0004732;2.60e-11;13!UBERON:0000955;3.31e-11;68!UBERON:0000956;2.11e-10;25!UBERON:0000203;2.11e-10;25!UBERON:0007023;3.56e-10;114!UBERON:0004733;2.56e-09;12!UBERON:0002028;2.56e-09;12!UBERON:0009663;1.04e-08;7!UBERON:0002240;1.30e-08;3!UBERON:0005174;1.30e-08;3!UBERON:0001137;1.30e-08;3!UBERON:0001896;1.68e-08;3!UBERON:0005290;1.68e-08;3!UBERON:0000988;3.30e-08;3!UBERON:0002021;9.13e-08;5!UBERON:0005162;8.60e-07;2!UBERON:0000122;8.60e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.09e-35,56;UBERON:0005068,1.09e-35,56;UBERON:0006241,1.09e-35,56;UBERON:0007135,1.09e-35,56;UBERON:0001017,1.54e-34,81;UBERON:0003075,1.66e-34,82;UBERON:0007284,1.66e-34,82;UBERON:0001016,3.91e-34,89;UBERON:0002346,2.07e-32,86;UBERON:0007023,6.55e-32,114;UBERON:0000073,3.06e-30,53;UBERON:0002616,3.06e-30,53;UBERON:0010371,1.80e-26,104;UBERON:0010314,1.42e-25,132;UBERON:0000955,3.72e-25,68;UBERON:0006238,3.72e-25,68;UBERON:0002780,3.26e-22,41;UBERON:0001890,3.26e-22,41;UBERON:0003080,3.26e-22,41;UBERON:0006240,3.26e-22,41;UBERON:0004121,4.73e-22,171;UBERON:0000924,4.73e-22,171;UBERON:0006601,4.73e-22,171;UBERON:0003056,3.11e-21,61;UBERON:0001893,5.78e-20,34;UBERON:0003528,8.94e-20,34;UBERON:0002020,8.94e-20,34;UBERON:0002791,1.18e-16,32;UBERON:0001869,1.76e-16,32;UBERON:0003076,4.15e-15,15;UBERON:0003057,4.15e-15,15;UBERON:0002298,5.44e-15,6;UBERON:0001950,1.25e-13,20;UBERON:0000125,1.60e-12,9;UBERON:0002308,1.60e-12,9;UBERON:0002619,3.32e-12,22;UBERON:0011216,1.29e-11,223;UBERON:0004732,2.69e-11,13;UBERON:0000956,1.74e-10,25;UBERON:0000203,1.74e-10,25;UBERON:0004733,2.64e-09,12;UBERON:0002028,2.64e-09,12;UBERON:0007277,2.64e-09,12;UBERON:0002240,9.49e-09,3;UBERON:0005174,9.49e-09,3;UBERON:0001137,9.49e-09,3;UBERON:0009663,1.22e-08,7;UBERON:0000025,1.66e-08,192;UBERON:0001896,1.93e-08,3;UBERON:0005290,1.93e-08,3;UBERON:0010096,1.93e-08,3;UBERON:0000988,3.11e-08,3;UBERON:0002021,9.49e-08,5;UBERON:0004111,2.80e-07,240;UBERON:0000966,7.50e-07,6;UBERON:0005388,7.50e-07,6;UBERON:0001802,7.50e-07,6;UBERON:0005162,8.62e-07,2;UBERON:0000122,8.62e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.626909442956176,0.286235987131057,0.410623275218653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0.0945348171640679,0,0,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07355300420312,2.12047629314376,1.39432731443422,2.798848485415,2.27088765788066,1.09493207722749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,1.62302566965108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.28629153492474,7.25778008560728,3.51652341630141,1.71072446022705,5.65551209868279,16.5188681814155,20.0078502841405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.57370323600434,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53870075069834,1.31205858279882,0,2.57602529119306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.2594512186427,0,0,0,0,0,0,0,0,0,0,0,0,11.3233515395122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.422008249231538,0,0,6.96713846822378,0,0.276283915531148,0,0,0,0,0,0,0,0.197286811273867,0,0,2.90799823828566,4.45286871176886,0,0,0,0,0,0,0,0,0,0,2.65722415744152,0.120596438625408,0,0.110579259931225,1.47773809476774,2.19385397153973,0,0,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0.189753732724185,0,0,0,0.141353071433941,0.216388639742091,0,0.353830258013357,1.22206028986725,0,0,0,13.4802265961354,4.81546588379273,8.66778449183755,0,0,0,3.94584402849391,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.706049013532002,6.55344148263544,0,0,2.65905343014691,0,0,0,0,0,0,0.343189995723929,0,0,0,0,0,0,0,4.80336230967832,2.0535806833799,0,0,0,2.79282401272254,2.29160424011684,0,0.199679000498991,0.858452096273142,1.33902874465124,34.8682222206109,0,6.98975697164723,0.315132729228895,0.576911008668165,0.808842526250219,0,0,0,0.817220436669454,1.60753148465019,2.75078873194468,3.32352270423348,0,0,2.55148137963704,0,0,0,0,0,0,5.71756261098694,4.63464379255802,3.30549098951175,0,0,0,0,0,0,0,0.58620893471233,0,3.23207390903876,2.77688463659649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,1.58634144372552,0.500763722825999,3.44045517414043,4.10437490686353,5.65077266766589,0.415045904808692,0,0,1.42732666772484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691292180758654,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,3.88169321028054,0.157265941855896,0,0.169732529954025,0,0,0,0,0,0,0,0,2.76185667914776,1.41696576325585,1.43670473151436,4.1023272848151,0.504143392443436,3.94196339046042,2.09918339321406,18.5600246336901,0,0,0,0,0,0,0,0.451261970095544,0,0,0,0,0,2.76904096935418,5.46754669029693,0.206686796501184,2.7902956485319,0,0,0.496211178389294,0,0,0.535701835878287,0,0,0.227662191351298,0,0,0,5.84539703600753,2.95977481032821,0,0,0.313972371402056,0.628462359664008,0.560544326627578,0,0,0,16.2966520722776,0,10.5779697084994,0.173858272302579,0,0,0,0,0.430227358820278,0,0,10.1612892045823,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0.198950775161368,0,0,0,0,0.0771741581079447,0,0,0,0,8.83388102017254,2.97046400327086,8.8757702792514,0,0,0,0,0,0,0,0,0,6.45028124181531,3.62874593044325,3.80752345069122,0,0,0,0,0,2.90182777120682,0.218531143927391,9.62908607686921,0,0,0,0,0,0,5.80418607621146,2.58582489654738,0.639701945702943,0.476128862927481,0,0,0,0.0636471582781649,0.202117188958219,2.17716747896961,4.79126621519393,0.0673520530145875,0,2.99394320891412,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@CA14 | |||
}} |
Latest revision as of 21:47, 16 September 2015
Short description: | p3@CA14 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CA14_5end |
Coexpression cluster: | C1249_Melanocyte_anaplastic_Wilms_retina_heart_optic_teratocarcinoma |
Association with transcript: | 73bp_to_NM_012113, uc001etx.2, uc009wln.2_5end |
EntrezGene: | CA14 |
HGNC: | 1372 |
UniProt: | A8K3J4Q9ULX7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 9.96e-24 | 10 |
melanoblast | 9.96e-24 | 10 |
pigment cell | 6.21e-23 | 14 |
embryonic stem cell | 3.13e-11 | 5 |
neurecto-epithelial cell | 9.84e-11 | 20 |
columnar/cuboidal epithelial cell | 6.71e-09 | 27 |
light melanocyte | 3.88e-08 | 3 |