FFCP PHASE1:Hg19::chr1:150230291..150230323,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:150230291..150230323,+ to FFCP PHASE1:Hg19::chr1:150230291..150230323,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23632 | |EntrezGene=23632 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1372 | |HGNC=1372 | ||
|TSSclassifier=strong | |||
|UniProt=A8K3J4,Q9ULX7 | |UniProt=A8K3J4,Q9ULX7 | ||
|association_with_transcript=73bp_to_NM_012113,uc001etx.2,uc009wln.2_5end | |||
|cluster_id=chr1:150230291..150230323,+ | |||
|coexpression_cluster_id=C1249 | |||
|description=CAGE_peak_3_at_CA14_5end | |||
|id=chr1:150230291..150230323,+ | |||
|ontology_enrichment_celltype=CL:0000148!8.64e-16!10;CL:0000541!8.64e-16!10;CL:0000147!5.86e-15!14;CL:0002322!9.07e-08!5;CL:0000710!9.54e-08!20;CL:0000133!5.45e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000148;1.05e-23;10!CL:0000147;6.11e-23;14!CL:0002322;1.87e-11;5!CL:0000710;1.01e-10;20!CL:0000075;7.15e-09;27!CL:0002567;4.44e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,9.96e-24,10;CL:0000541,9.96e-24,10;CL:0000147,6.21e-23,14;CL:0002322,3.13e-11,5;CL:0000710,9.84e-11,20;CL:0000075,6.71e-09,27;CL:0002567,3.88e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.34e-13;82!UBERON:0006241;1.30e-08;3!UBERON:0003057;1.30e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.43e-49!115;UBERON:0000073!5.28e-48!94;UBERON:0001016!5.28e-48!94;UBERON:0005743!3.76e-47!86;UBERON:0001049!1.42e-46!57;UBERON:0005068!1.42e-46!57;UBERON:0006241!1.42e-46!57;UBERON:0007135!1.42e-46!57;UBERON:0001017!3.10e-44!82;UBERON:0003075!4.08e-40!86;UBERON:0007284!4.08e-40!86;UBERON:0002346!5.02e-39!90;UBERON:0002616!1.95e-37!59;UBERON:0002780!4.94e-35!41;UBERON:0001890!4.94e-35!41;UBERON:0006240!4.94e-35!41;UBERON:0000955!1.12e-34!69;UBERON:0006238!1.12e-34!69;UBERON:0003080!6.05e-34!42;UBERON:0001893!4.23e-31!34;UBERON:0002020!6.58e-31!34;UBERON:0003528!6.58e-31!34;UBERON:0002791!8.23e-30!33;UBERON:0001869!4.23e-28!32;UBERON:0003056!7.04e-28!61;UBERON:0004121!3.61e-27!169;UBERON:0000924!5.51e-27!173;UBERON:0006601!5.51e-27!173;UBERON:0000153!1.71e-23!129;UBERON:0007811!1.71e-23!129;UBERON:0000033!2.75e-23!123;UBERON:0000956!6.59e-20!25;UBERON:0000203!6.59e-20!25;UBERON:0001950!4.13e-19!20;UBERON:0002619!4.60e-19!22;UBERON:0003076!2.16e-13!15;UBERON:0003057!2.16e-13!15;UBERON:0002308!6.59e-13!9;UBERON:0000125!6.59e-13!9;UBERON:0002420!2.72e-12!9;UBERON:0007245!2.72e-12!9;UBERON:0010009!2.72e-12!9;UBERON:0010011!2.72e-12!9;UBERON:0000454!2.72e-12!9;UBERON:0004732!9.94e-11!13;UBERON:0000025!2.59e-10!194;UBERON:0009663!3.10e-10!7;UBERON:0002298!4.59e-10!8;UBERON:0004111!7.22e-10!241;UBERON:0004733!2.75e-09!12;UBERON:0002028!2.75e-09!12;UBERON:0007277!2.75e-09!12;UBERON:0000200!1.04e-08!6;UBERON:0000064!4.82e-08!219;UBERON:0000477!6.59e-08!286;UBERON:0002021!9.07e-08!5;UBERON:0000483!1.16e-07!309;UBERON:0000119!1.99e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;9.04e-18;34!UBERON:0000073;6.11e-17;53!UBERON:0002616;6.11e-17;53!UBERON:0003528;2.08e-16;34!UBERON:0002020;2.08e-16;34!UBERON:0002780;1.75e-15;41!UBERON:0001890;1.75e-15;41!UBERON:0001869;3.43e-15;32!UBERON:0002298;5.03e-15;6!UBERON:0002791;6.24e-15;32!UBERON:0001017;4.14e-14;75!UBERON:0001950;1.60e-13;20!UBERON:0000125;1.35e-12;9!UBERON:0002308;1.35e-12;9!UBERON:0002619;4.15e-12;22!UBERON:0001016;9.06e-12;83!UBERON:0004732;2.60e-11;13!UBERON:0000955;3.31e-11;68!UBERON:0000956;2.11e-10;25!UBERON:0000203;2.11e-10;25!UBERON:0007023;3.56e-10;114!UBERON:0004733;2.56e-09;12!UBERON:0002028;2.56e-09;12!UBERON:0009663;1.04e-08;7!UBERON:0002240;1.30e-08;3!UBERON:0005174;1.30e-08;3!UBERON:0001137;1.30e-08;3!UBERON:0001896;1.68e-08;3!UBERON:0005290;1.68e-08;3!UBERON:0000988;3.30e-08;3!UBERON:0002021;9.13e-08;5!UBERON:0005162;8.60e-07;2!UBERON:0000122;8.60e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.09e-35,56;UBERON:0005068,1.09e-35,56;UBERON:0006241,1.09e-35,56;UBERON:0007135,1.09e-35,56;UBERON:0001017,1.54e-34,81;UBERON:0003075,1.66e-34,82;UBERON:0007284,1.66e-34,82;UBERON:0001016,3.91e-34,89;UBERON:0002346,2.07e-32,86;UBERON:0007023,6.55e-32,114;UBERON:0000073,3.06e-30,53;UBERON:0002616,3.06e-30,53;UBERON:0010371,1.80e-26,104;UBERON:0010314,1.42e-25,132;UBERON:0000955,3.72e-25,68;UBERON:0006238,3.72e-25,68;UBERON:0002780,3.26e-22,41;UBERON:0001890,3.26e-22,41;UBERON:0003080,3.26e-22,41;UBERON:0006240,3.26e-22,41;UBERON:0004121,4.73e-22,171;UBERON:0000924,4.73e-22,171;UBERON:0006601,4.73e-22,171;UBERON:0003056,3.11e-21,61;UBERON:0001893,5.78e-20,34;UBERON:0003528,8.94e-20,34;UBERON:0002020,8.94e-20,34;UBERON:0002791,1.18e-16,32;UBERON:0001869,1.76e-16,32;UBERON:0003076,4.15e-15,15;UBERON:0003057,4.15e-15,15;UBERON:0002298,5.44e-15,6;UBERON:0001950,1.25e-13,20;UBERON:0000125,1.60e-12,9;UBERON:0002308,1.60e-12,9;UBERON:0002619,3.32e-12,22;UBERON:0011216,1.29e-11,223;UBERON:0004732,2.69e-11,13;UBERON:0000956,1.74e-10,25;UBERON:0000203,1.74e-10,25;UBERON:0004733,2.64e-09,12;UBERON:0002028,2.64e-09,12;UBERON:0007277,2.64e-09,12;UBERON:0002240,9.49e-09,3;UBERON:0005174,9.49e-09,3;UBERON:0001137,9.49e-09,3;UBERON:0009663,1.22e-08,7;UBERON:0000025,1.66e-08,192;UBERON:0001896,1.93e-08,3;UBERON:0005290,1.93e-08,3;UBERON:0010096,1.93e-08,3;UBERON:0000988,3.11e-08,3;UBERON:0002021,9.49e-08,5;UBERON:0004111,2.80e-07,240;UBERON:0000966,7.50e-07,6;UBERON:0005388,7.50e-07,6;UBERON:0001802,7.50e-07,6;UBERON:0005162,8.62e-07,2;UBERON:0000122,8.62e-07,2 | |||
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| ||
|short_description=p3@CA14 | |||
}} | }} |
Latest revision as of 21:47, 16 September 2015
Short description: | p3@CA14 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CA14_5end |
Coexpression cluster: | C1249_Melanocyte_anaplastic_Wilms_retina_heart_optic_teratocarcinoma |
Association with transcript: | 73bp_to_NM_012113, uc001etx.2, uc009wln.2_5end |
EntrezGene: | CA14 |
HGNC: | 1372 |
UniProt: | A8K3J4Q9ULX7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 9.96e-24 | 10 |
melanoblast | 9.96e-24 | 10 |
pigment cell | 6.21e-23 | 14 |
embryonic stem cell | 3.13e-11 | 5 |
neurecto-epithelial cell | 9.84e-11 | 20 |
columnar/cuboidal epithelial cell | 6.71e-09 | 27 |
light melanocyte | 3.88e-08 | 3 |