FFCP PHASE1:Hg19::chr2:30670209..30670220,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:30670209..30670220,+
|short_description=p4@LCLAT1
|description=CAGE_peak_4_at_LCLAT1_5end
|association_with_transcript=-33bp_to_ENST00000497423_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=253558 | |EntrezGene=253558 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26756 | |HGNC=26756 | ||
|TSSclassifier=strong | |||
|UniProt=C9J6F4 | |UniProt=C9J6F4 | ||
|association_with_transcript=-33bp_to_ENST00000497423_5end | |||
|cluster_id=chr2:30670209..30670220,+ | |||
|coexpression_cluster_id=C102 | |||
|description=CAGE_peak_4_at_LCLAT1_5end | |||
|id=chr2:30670209..30670220,+ | |||
|ontology_enrichment_celltype=CL:0002620!4.01e-08!23 | |||
|ontology_enrichment_celltype_v019=CL:0000815;2.65e-11;2!CL:0000792;2.65e-11;2!CL:0002677;2.65e-11;2!CL:0002620;3.27e-10;23!CL:0000898;8.14e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000815,1.67e-11,2;CL:0000792,1.67e-11,2;CL:0002677,1.67e-11,2;CL:0002620,3.65e-10,23;CL:0000898,6.00e-08,3;CL:0000319,9.15e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,8.67e-07,1;DOID:0060061,8.67e-07,1;DOID:8691,8.67e-07,1;DOID:3030,9.15e-07,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,6.72e-07,41 | |||
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| ||
|short_description=p4@LCLAT1 | |||
}} | }} |
Latest revision as of 22:04, 16 September 2015
Short description: | p4@LCLAT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LCLAT1_5end |
Coexpression cluster: | C102_neuroblastoma_testicular_pituitary_carcinosarcoma_rectum_acantholytic_iPS |
Association with transcript: | -33bp_to_ENST00000497423_5end |
EntrezGene: | LCLAT1 |
HGNC: | 26756 |
UniProt: | C9J6F4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regulatory T cell | 1.67e-11 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.67e-11 | 2 |
naive regulatory T cell | 1.67e-11 | 2 |
skin fibroblast | 3.65e-10 | 23 |
naive T cell | 6.00e-08 | 3 |
mucus secreting cell | 9.15e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
skin of body | 6.72e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 8.67e-07 | 1 |
cutaneous T cell lymphoma | 8.67e-07 | 1 |
mycosis fungoides | 8.67e-07 | 1 |
mucinous adenocarcinoma | 9.15e-07 | 1 |