FFCP PHASE1:Hg19::chr2:30865408..30865436,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:30865408..30865436,+
|short_description=p7@LCLAT1
|description=CAGE_peak_7_at_LCLAT1_5end
|association_with_transcript=-157bp_to_BX537607_5end
|EntrezGene...") |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=253558 | |EntrezGene=253558 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=26756 | |HGNC=26756 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-157bp_to_BX537607_5end | |||
|cluster_id=chr2:30865408..30865436,+ | |||
|coexpression_cluster_id=C102 | |||
|description=CAGE_peak_7_at_LCLAT1_5end | |||
|id=chr2:30865408..30865436,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002553;4.22e-21;1!CL:0002617;3.02e-11;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,2.82e-21,1;CL:0002617,4.09e-11,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!8.16e-20!239;DOID:162!4.30e-19!235;DOID:0050687!4.88e-14!143;DOID:305!1.90e-11!106;DOID:0050686!6.93e-08!137 | |||
|ontology_enrichment_disease_v019=DOID:4960;4.22e-21;1!DOID:0070004;4.22e-21;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,9.43e-21,1;DOID:0070004,9.43e-21,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p7@LCLAT1 | |||
}} | }} |
Latest revision as of 22:24, 16 September 2015
Short description: | p7@LCLAT1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_LCLAT1_5end |
Coexpression cluster: | C102_neuroblastoma_testicular_pituitary_carcinosarcoma_rectum_acantholytic_iPS |
Association with transcript: | -157bp_to_BX537607_5end |
EntrezGene: | LCLAT1 |
HGNC: | 26756 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 2.82e-21 | 1 |
adipocyte of breast | 4.09e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 9.43e-21 | 1 |
myeloma | 9.43e-21 | 1 |