FFCP PHASE1:Hg19::chr1:246580662..246580673,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64754 | |EntrezGene=64754 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15513 | |HGNC=15513 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=37bp_to_uc001ibk.2_5end | |association_with_transcript=37bp_to_uc001ibk.2_5end | ||
|cluster_id=chr1:246580662..246580673,- | |||
|coexpression_cluster_id=C2577 | |||
|description=CAGE_peak_5_at_SMYD3_5end | |description=CAGE_peak_5_at_SMYD3_5end | ||
|id=chr1:246580662..246580673,- | |id=chr1:246580662..246580673,- | ||
|ontology_enrichment_celltype=CL:0000055!1.42e-14!180;CL:0002334!1.64e-11!12;CL:0000057!1.98e-10!75;CL:0000133!1.43e-08!59;CL:0002319!6.57e-08!25;CL:0002620!1.09e-07!23;CL:0000243!7.90e-07!15;CL:0000125!7.90e-07!15;CL:0000030!7.90e-07!15;CL:0000339!7.90e-07!15;CL:0000569!9.95e-07!4;CL:0000011!9.95e-07!4 | |ontology_enrichment_celltype=CL:0000055!1.42e-14!180;CL:0002334!1.64e-11!12;CL:0000057!1.98e-10!75;CL:0000133!1.43e-08!59;CL:0002319!6.57e-08!25;CL:0002620!1.09e-07!23;CL:0000243!7.90e-07!15;CL:0000125!7.90e-07!15;CL:0000030!7.90e-07!15;CL:0000339!7.90e-07!15;CL:0000569!9.95e-07!4;CL:0000011!9.95e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0000077;3.39e-10;19!CL:0000047;1.30e-09;2!CL:0002570;4.27e-09;8!CL:0000048;8.53e-08;58!CL:0002540;3.72e-07;6!CL:0002092;4.25e-07;10!CL:0000723;5.09e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,3.99e-10,19;CL:0002570,5.34e-09,8;CL:0002540,3.15e-07,6;CL:0002092,4.12e-07,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!7.08e-08!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;1.30e-09;2!UBERON:0002757;1.30e-09;2!UBERON:0010134;1.30e-09;2!UBERON:0005408;1.30e-09;2!UBERON:0001899;1.30e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,2.10e-09,2;UBERON:0002757,2.10e-09,2;UBERON:0010134,2.10e-09,2;UBERON:0005408,2.10e-09,2;UBERON:0001899,2.10e-09,2 | |||
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|phase1_expression=0,0,0.986680828671798,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0.123121058076788,0,0,0.286235987131057,0.547497700291537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0,10.4603252842443,0.286836620748814,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0.23486899728753,0.809364721840658,0,0,0.122834317311768,0,0,0.247266929278557,0,0,0,0,0,1.31693286264251,1.83892677479412,0,0,0,0.640672166455702,1.48352330811693,0.300091096084402,0.206105058476878,0,0.37223371266318,0.675105328965065,0.0974370051611986,0,0.368199594569197,0,0,0.403008392910561,0.169560592310488,0,0,0,0,0,0,0.414644220061482,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.90259361757081,0.720599767084807,2.14612136824846,0,0,0,1.71072446022705,0,0,0,0,0,0,0.387815147273333,0,0,0,0,0,0,0,0,0,0,0,0,0,4.82303003295338,9.58686804460323,1.09970290300263,0,0,0,0,0,0,0.144781306667579,0,0.358121926479791,0,0,0,0,3.30323011489202,1.30139853857622,0,1.17261385734044,0.637938751653163,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0,0.585707074963566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24053903909388,0.153461973288062,0.561320188866147,6.53509661204075,0.511707249066704,0.482561763430822,0,0.616838775210622,2.84098760501003,2.79232330446951,0,0.116210378459959,0,0,0,0.574072240823034,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0.137836572484531,0.751941714077915,0.290033387828457,0.0852266274161009,0,0,0,0,0,1.85938219718914,1.5740617341532,0,0,0,0,0,0,0,0,0.762520775695299,0,0,0,0,0.719489830333259,0.274537029736055,0.117812402345686,0.202182481573316,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,6.0977433463901,0,0,0,0,1.53403023753232,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0.347249989866585,0,0,0,0,0,0.438770794307945,0,0,0,5.24133456896206,0,0,0,0,0,0,0,0.470940769185074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0.209205692624666,0,20.2265412931063,0.600420288709789,0,0,0,1.57732412567589,0,0,0,0,0,0,0.0671834724867263,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0.979762080328227,0,0,9.03056515462735,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,2.38807684618998,13.555371971139,4.43844689202091,4.73507513187723,1.76097531226803,4.44905610798268,11.4420034198462,6.35169879805604,0.15543720058278,0.147855149989634,0,0.449803112163605,0,0.414706207840855,2.12673371646396,0,3.30566739793881,1.90402606084398,1.22061219961398,0.545545977607678,0,0.464033759878494,0.398095888698616,0,0.686791410365586,1.01024846629776,0,1.34833881285112,0,0,0,1.389134845943,0,2.32815493405934,0,1.09642024789354,0,0.38582807654183,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0.344429959321631,0,0.184105950251841,0,0,0.127894371303652,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,1.1441462864015,0,0,0,1.0085253435176,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,3.21421101526972,1.00885116665647,0,0,0.0887023701626388,0,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236664001461131,1.19298766662821,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213454691755431,0,0,0,0,0,0,0,0 | ||
|short_description=p5@SMYD3 | |short_description=p5@SMYD3 | ||
}} | }} |
Latest revision as of 22:41, 16 September 2015
Short description: | p5@SMYD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SMYD3_5end |
Coexpression cluster: | C2577_mesenchymal_Fibroblast_Mesothelial_anaplastic_glioma_Preadipocyte_liposarcoma |
Association with transcript: | 37bp_to_uc001ibk.2_5end |
EntrezGene: | SMYD3 |
HGNC: | 15513 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 3.99e-10 | 19 |
mesenchymal stem cell of adipose | 5.34e-09 | 8 |
mesenchymal stem cell of the bone marrow | 3.15e-07 | 6 |
bone marrow cell | 4.12e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
pineal body | 2.10e-09 | 2 |
regional part of epithalamus | 2.10e-09 | 2 |
secretory circumventricular organ | 2.10e-09 | 2 |
circumventricular organ | 2.10e-09 | 2 |
epithalamus | 2.10e-09 | 2 |