FFCP PHASE1:Hg19::chr11:16629597..16629610,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55553 | |EntrezGene=55553 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16421 | |HGNC=16421 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-323bp_to_ENST00000525835_5end | |association_with_transcript=-323bp_to_ENST00000525835_5end | ||
|cluster_id=chr11:16629597..16629610,- | |||
|coexpression_cluster_id=C90 | |||
|description=CAGE_peak_25_at_SOX6_5end | |description=CAGE_peak_25_at_SOX6_5end | ||
|id=chr11:16629597..16629610,- | |id=chr11:16629597..16629610,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000333;6.21e-07;5 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:171!2.39e-12!10 | |||
|ontology_enrichment_disease_v019=DOID:171;1.54e-70;10!DOID:3095;2.03e-32;22!DOID:2994;2.03e-32;22!DOID:3193;2.21e-15;2!DOID:962;2.21e-15;2!DOID:1192;1.04e-10;3 | |||
|ontology_enrichment_disease_v019_2=DOID:171,1.54e-70,10;DOID:3095,2.03e-32,22;DOID:2994,2.03e-32,22;DOID:3193,1.78e-15,2;DOID:962,1.78e-15,2;DOID:1192,8.99e-11,3;DOID:0050687,2.39e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0002346!9.85e-11!90;UBERON:0001869!2.52e-07!32;UBERON:0001049!3.99e-07!57;UBERON:0005068!3.99e-07!57;UBERON:0006241!3.99e-07!57;UBERON:0007135!3.99e-07!57;UBERON:0002791!4.48e-07!33;UBERON:0002780!5.20e-07!41;UBERON:0001890!5.20e-07!41;UBERON:0006240!5.20e-07!41;UBERON:0002020!7.69e-07!34;UBERON:0003528!7.69e-07!34;UBERON:0001893!7.69e-07!34;UBERON:0003080!8.18e-07!42;UBERON:0000924!9.16e-07!173;UBERON:0006601!9.16e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;8.65e-113;4!UBERON:0000923;8.65e-113;4!UBERON:0010316;8.65e-113;4!UBERON:0005291;8.65e-113;4!UBERON:0002050;1.98e-90;5!UBERON:0005423;1.98e-90;5!UBERON:0003714;2.21e-15;2!UBERON:0000013;6.21e-07;5!UBERON:0002410;6.21e-07;5!UBERON:0000922;6.72e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003714,1.78e-15,2;UBERON:0000013,5.70e-07,5;UBERON:0002410,5.70e-07,5 | |||
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|short_description=p25@SOX6 | |short_description=p25@SOX6 | ||
}} | }} |
Latest revision as of 23:15, 16 September 2015
Short description: | p25@SOX6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_25_at_SOX6_5end |
Coexpression cluster: | C90_neuroectodermal_peripheral_neuroepithelioma_neuroblastoma_carcinoid_parietal_putamen |
Association with transcript: | -323bp_to_ENST00000525835_5end |
EntrezGene: | SOX6 |
HGNC: | 16421 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tissue | 1.78e-15 | 2 |
sympathetic nervous system | 5.70e-07 | 5 |
autonomic nervous system | 5.70e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 1.54e-70 | 10 |
germ cell and embryonal cancer | 2.03e-32 | 22 |
germ cell cancer | 2.03e-32 | 22 |
peripheral nerve sheath neoplasm | 1.78e-15 | 2 |
neurofibroma | 1.78e-15 | 2 |
peripheral nervous system neoplasm | 8.99e-11 | 3 |
cell type cancer | 2.39e-07 | 143 |