FFCP PHASE1:Hg19::chr2:33172191..33172205,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4052 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6714 | |||
|TSSclassifier=strong | |||
|UniProt=Q14766 | |||
|association_with_transcript=152bp_to_ENST00000404816_5end | |||
|cluster_id=chr2:33172191..33172205,+ | |||
|description=CAGE_peak_8_at_LTBP1_5end | |||
|id=chr2:33172191..33172205,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000349;1.36e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,7.41e-09,8;CL:0000349,1.55e-07,19 | |||
|ontology_enrichment_development_v019=UBERON:0005795;1.54e-08;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!8.63e-12!659;UBERON:0005156!1.48e-10!59;UBERON:0000990!1.48e-10!59;UBERON:0000481!2.04e-09!347;UBERON:0000064!6.43e-09!219;UBERON:0000922!1.59e-08!612;UBERON:0005631!2.70e-08!14;UBERON:0000158!2.70e-08!14;UBERON:0000467!2.83e-08!625;UBERON:0000480!4.19e-08!626;UBERON:0003133!7.26e-08!48;UBERON:0000119!2.12e-07!312;UBERON:0005795!2.97e-07!22;UBERON:0003064!4.21e-07!37;UBERON:0000483!4.54e-07!309;UBERON:0003886!5.63e-07!63;UBERON:0004175!6.24e-07!25;UBERON:0001008!7.26e-07!45;UBERON:0002050!7.77e-07!605;UBERON:0005423!7.77e-07!605;UBERON:0006554!9.21e-07!44;UBERON:0002553!9.28e-07!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;3.09e-10;10!UBERON:0000158;3.09e-10;10!UBERON:0000922;8.45e-08;49!UBERON:0000478;8.98e-08;24!UBERON:0000305;9.58e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,7.45e-12,14;UBERON:0000158,7.45e-12,14;UBERON:0005156,1.12e-09,59;UBERON:0000990,1.12e-09,59;UBERON:0005795,7.44e-09,22;UBERON:0000995,6.24e-08,21;UBERON:0000478,1.01e-07,24;UBERON:0004871,1.54e-07,8;UBERON:0003975,2.19e-07,22;UBERON:0006554,3.63e-07,47;UBERON:0003133,4.26e-07,48;UBERON:0004175,5.77e-07,25;UBERON:0003124,5.86e-07,7;UBERON:0001008,6.99e-07,48 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0.245733936501509,0,4.80571018686379,6.59417445571134,0.618831764800233,1.32558950291166,1.34465029290355,0.602694528023977,2.92124036154949,1.46379839637152,0.861847406537515,0.408001382488506,3.13454721478088,4.86601178122796,3.01123735160345,3.38965126905968,0,0,0,0,0,0.309632246632152,0,0.30120591877825,0,0.852139206383318,1.13735385989937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0.383587685530591,0,0.50133791063589,0.144846518960824,0,0,0.756278537312543,1.10864698731282,0.87834785693126,0.916853528483988,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0.56530794192401,0,0.825354125820202,0.417989933073621,2.06733407335463,1.42306505074684,1.00416183829401,0.402829317109147,0,1.22031028774085,0.735326160691737,1.62028389576352,1.16089646769304,0.898117490504679,0.900891843866578,1.53316637465883,1.89853131913626,1.64881569537367,0,0,0,0,0.506522046658319,0.397227542439656,3.44203944898576,0,0,0,0.49333509683432,0.933633106199299,0.942974704487816,0.326923806226917,1.81628913173918,0.576175924479999,1.17160715916898,0,0.570471821544449,0.896692083310806,0.704606991862589,0.809364721840658,1.26405726032024,0.408308342509787,1.10550885580591,1.65321249881225,1.18800285728205,0.494533858557114,0,0.718618141816238,2.35670559535693,2.12701483782339,0.831192346452549,0.438977620880838,0.30648779579902,0,1.13432183160021,0.89694817844431,0.427114777637135,0,0.300091096084402,0.515262646192195,0,0.37223371266318,0.337552664482532,0,1.51460264546469,0.460249493211497,0.323292113637624,0,0.201504196455281,0.169560592310488,0.386521706326594,0.545492241181669,0.286804595389004,0.609868530647977,1.45782745153634,2.32387885739037,1.34759371519982,3.5324919122588,2.55484151353081,0,0.643240938192885,0,0.464367928031979,0,0,0,0,0,0,0,0.134831308160164,0.196221465125346,0.38474715694639,0.738155454624648,4.20725321410337,1.2347220339942,0,0,0,0.590789906681404,0,0.737930631258681,0.343135620597051,0.768251997860379,0,0.201057944823262,0.185176890317059,0.977424915930974,4.15973914111831,0,2.78232971940184,4.3441216867254,0.288732895522148,0.925971025153221,0,1.58040879591855,0,0,0,0,0,0.335964256397719,0.283550194484773,0.0895585227028483,0.290633938513962,0.766765358330422,0,0,0,0,0,0,0.381988425558278,0,0,0.205654985406647,0,0.285826432630578,0.897048674762886,0.87192013766656,0.5867062865676,0.387815147273333,0,0,0.26593811658487,1.04007436911366,0.514414748524284,0,0,1.00084595560703,0.542621605391443,0,0.65147236858747,1.42156779497018,0,0,0,0,0,0,0,0.479249710983165,2.29723871668228,0,0,0,0,0,0,0,0,7.11464947822898,2.60279707715243,1.54657762555539,2.68026024534958,2.55175500661265,0,0,0,0.981531933753119,1.50051156317903,0.271265023699736,1.24782516918484,2.14114786556594,1.10391690523754,1.63997980989798,0.601892199455438,0,0,0.664225598535437,0.368738337083406,0.955719759148911,0.979005787313703,0.343143423810856,0,0,0,0.303127571446259,1.66435439510497,5.14063498660456,0,0.460385919864187,0,0.128139149255701,0.511707249066704,1.12597744800525,0,0.154209693802656,0.177561725313127,0.0821271560138091,2.59627214591811,0.232420756919918,1.20859449591622,1.00253235151642,0.276242966807689,1.03333003348146,1.82091168006717,1.70461739447251,0,1.92538342761037,2.35304930753057,1.46139224653261,0.949964660035881,1.13733384070897,1.02056223165909,1.29549549661284,1.54227252690289,0.270946437543853,2.00675909541941,0.509752546090077,0.831076008928724,1.11937377361089,1.09629938322967,0.522870902049801,0.256450125116389,0.328014645699706,0.650756789328606,1.13345112812495,0.640986253728404,0.330037999682352,0,0.650060246036521,3.21367859688319,1.83674364755032,0.308097234229289,0.307007349452259,0.551346289938122,0.214840489736547,0.290033387828457,0.681813019328807,0.534192213880424,0.826424576804891,1.34533047155574,0.255225424989168,1.2138933702666,0,4.40737285562896,0.6970372701606,0,0,0,0.18532421910392,0.143124886741991,0.744316738719335,1.89827654831236,1.5250415513906,0.511795582622668,1.28381696410176,0,0,0.899362287916574,1.64722217841633,1.41374882814824,0.202182481573316,0,0,2.43816869544795,0.243713489631284,0,1.22849920267187,1.55545975149084,0,0,0,0,0.578775534266688,0.655894752046633,0.405820753925408,0.6196469961995,0.281695602532241,0.860468113224309,1.17898849215745,0.35667105148125,0.709522128141196,0,0,0.75894634753143,1.39973888097993,0,0,0,2.35359501941948,0.43050537267123,0,0.886860307073351,0.229723400206959,0,0,0,0,0,0.648473311192717,0.540031437238115,0,1.6023610669121,0,0,0,0,0.0711418433484141,0.478278818186467,0,0,0,0,0,0,0,0,0.677167111206413,0,0,0,0,0,0,0,0,0,0,3.2454681417118,0,0,0.18714054040822,1.02555725490326,0.121360521749513,0.222886768554957,0,6.20735660317994,4.75143489332222,6.14321404198464,0,0.422008249231538,0.890469640183247,0.988823245360557,1.9001286731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| |||
|short_description=p8@LTBP1 | |||
}} |
Latest revision as of 23:36, 16 September 2015
Short description: | p8@LTBP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_LTBP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 152bp_to_ENST00000404816_5end |
EntrezGene: | LTBP1 |
HGNC: | 6714 |
UniProt: | Q14766 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 7.41e-09 | 8 |
extraembryonic cell | 1.55e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 7.45e-12 | 14 |
membranous layer | 7.45e-12 | 14 |
reproductive structure | 1.12e-09 | 59 |
reproductive system | 1.12e-09 | 59 |
embryonic uterus | 7.44e-09 | 22 |
uterus | 6.24e-08 | 21 |
extraembryonic structure | 1.01e-07 | 24 |
somatic layer of lateral plate mesoderm | 1.54e-07 | 8 |
internal female genitalia | 2.19e-07 | 22 |
urinary system structure | 3.63e-07 | 47 |
reproductive organ | 4.26e-07 | 48 |
internal genitalia | 5.77e-07 | 25 |
chorion | 5.86e-07 | 7 |
renal system | 6.99e-07 | 48 |