FFCP PHASE1:Hg19::chr10:127511790..127511837,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7390 | |EntrezGene=7390 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12592 | |HGNC=12592 | ||
|TSSclassifier=strong | |||
|UniProt=P10746,Q5T3L9 | |UniProt=P10746,Q5T3L9 | ||
|association_with_transcript=0bp_to_ENST00000368797,ENST00000420761,NM_000375,uc001lix.3,uc001liy.3_5end | |||
|cluster_id=chr10:127511790..127511837,- | |||
|description=CAGE_peak_1_at_UROS_5end | |||
|id=chr10:127511790..127511837,- | |||
|ontology_enrichment_celltype=CL:0000055!1.68e-19!180;CL:0000222!3.07e-15!119;CL:0000183!2.76e-13!59;CL:0000192!8.35e-12!42;CL:0000514!8.35e-12!42;CL:0000680!1.06e-11!57;CL:0000056!1.06e-11!57;CL:0000355!1.06e-11!57;CL:0000187!2.70e-11!54;CL:0000359!5.81e-11!32;CL:0000220!1.07e-10!246;CL:0002321!3.52e-10!248;CL:0000393!3.96e-10!60;CL:0000211!3.96e-10!60;CL:0000057!3.72e-09!75 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.30e-10;32!CL:0000192;1.05e-08;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.08e-15,121;CL:0000192,8.41e-12,43;CL:0000514,8.41e-12,43;CL:0000680,9.94e-12,58;CL:0000056,9.94e-12,58;CL:0000355,9.94e-12,58;CL:0000187,2.53e-11,55;CL:0000359,5.81e-11,32;CL:0002321,2.34e-10,250;CL:0000393,3.59e-10,61;CL:0000211,3.59e-10,61;CL:0000057,2.95e-09,76 | |||
|ontology_enrichment_development_v019=CL:0000514;1.05e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.13e-14!83;UBERON:0002329!1.13e-14!83;UBERON:0003077!1.13e-14!83;UBERON:0003059!1.13e-14!83;UBERON:0007282!1.13e-14!83;UBERON:0009618!1.13e-14!83;UBERON:0007285!1.13e-14!83;UBERON:0004290!1.42e-14!70;UBERON:0000486!6.54e-14!82;UBERON:0001134!2.19e-12!61;UBERON:0002036!2.19e-12!61;UBERON:0003082!2.19e-12!61;UBERON:0000475!3.16e-12!365;UBERON:0002385!3.02e-11!63;UBERON:0001015!3.02e-11!63;UBERON:0000383!3.02e-11!63;UBERON:0000119!1.35e-10!312;UBERON:0000483!1.35e-10!309;UBERON:0005256!1.68e-10!143;UBERON:0000481!3.78e-09!347;UBERON:0003914!1.82e-08!118;UBERON:0002049!1.90e-08!79;UBERON:0007798!1.90e-08!79;UBERON:0004872!2.27e-08!84;UBERON:0000025!3.69e-08!194;UBERON:0001637!6.66e-08!42;UBERON:0003509!6.66e-08!42;UBERON:0004572!6.66e-08!42;UBERON:0002100!1.42e-07!216;UBERON:0000055!7.94e-07!69;UBERON:0001981!8.68e-07!60;UBERON:0007500!8.68e-07!60;UBERON:0004537!8.68e-07!60;UBERON:0006965!8.68e-07!60;UBERON:0001009!9.76e-07!113 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,9.95e-17,78;UBERON:0007524,4.03e-15,73;UBERON:0003077,8.67e-15,72;UBERON:0007285,8.67e-15,72;UBERON:0002329,1.32e-14,71;UBERON:0003059,1.32e-14,71;UBERON:0007282,1.32e-14,71;UBERON:0004290,1.32e-14,71;UBERON:0009618,1.32e-14,71;UBERON:0000486,5.88e-14,83;UBERON:0001134,2.04e-12,62;UBERON:0002036,2.04e-12,62;UBERON:0003082,2.04e-12,62;UBERON:0000483,2.20e-11,306;UBERON:0000119,2.21e-11,309;UBERON:0002385,2.76e-11,64;UBERON:0001015,2.76e-11,64;UBERON:0000383,2.76e-11,64;UBERON:0003104,2.99e-09,160;UBERON:0009142,2.99e-09,160;UBERON:0005256,1.10e-08,122;UBERON:0003914,2.11e-08,117;UBERON:0002049,2.40e-08,78;UBERON:0007798,2.40e-08,78;UBERON:0004872,2.87e-08,83;UBERON:0000025,3.05e-08,192;UBERON:0001637,6.65e-08,42;UBERON:0003509,6.65e-08,42;UBERON:0004572,6.65e-08,42;UBERON:0010314,5.70e-07,132;UBERON:0002100,6.18e-07,199;UBERON:0000490,7.34e-07,148;UBERON:0000055,9.95e-07,68 | |||
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| ||
|short_description=p1@UROS | |||
}} | }} |
Latest revision as of 23:38, 16 September 2015
Short description: | p1@UROS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_UROS_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000368797, ENST00000420761, NM_000375, uc001lix.3, uc001liy.3_5end |
EntrezGene: | UROS |
HGNC: | 12592 |
UniProt: | P10746Q5T3L9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.08e-15 | 121 |
smooth muscle cell | 8.41e-12 | 43 |
smooth muscle myoblast | 8.41e-12 | 43 |
muscle precursor cell | 9.94e-12 | 58 |
myoblast | 9.94e-12 | 58 |
multi-potent skeletal muscle stem cell | 9.94e-12 | 58 |
muscle cell | 2.53e-11 | 55 |
vascular associated smooth muscle cell | 5.81e-11 | 32 |
embryonic cell | 2.34e-10 | 250 |
electrically responsive cell | 3.59e-10 | 61 |
electrically active cell | 3.59e-10 | 61 |
fibroblast | 2.95e-09 | 76 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 9.95e-17 | 78 |
dense mesenchyme tissue | 4.03e-15 | 73 |
paraxial mesoderm | 8.67e-15 | 72 |
presumptive paraxial mesoderm | 8.67e-15 | 72 |
somite | 1.32e-14 | 71 |
presomitic mesoderm | 1.32e-14 | 71 |
presumptive segmental plate | 1.32e-14 | 71 |
dermomyotome | 1.32e-14 | 71 |
trunk paraxial mesoderm | 1.32e-14 | 71 |
multilaminar epithelium | 5.88e-14 | 83 |
skeletal muscle tissue | 2.04e-12 | 62 |
striated muscle tissue | 2.04e-12 | 62 |
myotome | 2.04e-12 | 62 |
epithelium | 2.20e-11 | 306 |
cell layer | 2.21e-11 | 309 |
muscle tissue | 2.76e-11 | 64 |
musculature | 2.76e-11 | 64 |
musculature of body | 2.76e-11 | 64 |
mesenchyme | 2.99e-09 | 160 |
entire embryonic mesenchyme | 2.99e-09 | 160 |
trunk mesenchyme | 1.10e-08 | 122 |
epithelial tube | 2.11e-08 | 117 |
vasculature | 2.40e-08 | 78 |
vascular system | 2.40e-08 | 78 |
splanchnic layer of lateral plate mesoderm | 2.87e-08 | 83 |
tube | 3.05e-08 | 192 |
artery | 6.65e-08 | 42 |
arterial blood vessel | 6.65e-08 | 42 |
arterial system | 6.65e-08 | 42 |
structure with developmental contribution from neural crest | 5.70e-07 | 132 |
trunk | 6.18e-07 | 199 |
unilaminar epithelium | 7.34e-07 | 148 |
vessel | 9.95e-07 | 68 |