FFCP PHASE1:Hg19::chr8:145025074..145025102,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr8:145025074..145025102,- to FFCP PHASE1:Hg19::chr8:145025074..145025102,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5339 | |EntrezGene=5339 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9069 | |HGNC=9069 | ||
|TSSclassifier=strong | |||
|UniProt=Q15149 | |UniProt=Q15149 | ||
|association_with_transcript=-30bp_to_ENST00000322810,NM_201380,uc003zaf.1_5end | |||
|cluster_id=chr8:145025074..145025102,- | |||
|coexpression_cluster_id=C4734 | |||
|description=CAGE_peak_2_at_PLEC_5end | |||
|id=chr8:145025074..145025102,- | |||
|ontology_enrichment_celltype=CL:0000055!3.47e-33!180;CL:0000057!4.25e-28!75;CL:0002371!5.21e-26!591;CL:0000144!1.44e-24!625;CL:0000548!2.15e-22!679;CL:0000004!2.15e-22!679;CL:0000255!2.15e-22!679;CL:0000012!7.47e-22!682;CL:0000048!2.56e-16!430;CL:0000723!3.58e-16!436;CL:0000034!2.00e-14!444;CL:0000222!8.33e-14!119;CL:0000003!1.24e-12!722;CL:0002620!5.86e-12!23;CL:0002320!9.03e-11!365;CL:0000183!9.24e-11!59;CL:0000680!2.14e-10!57;CL:0000056!2.14e-10!57;CL:0000355!2.14e-10!57;CL:0000187!1.26e-09!54;CL:0002057!1.79e-09!42;CL:0000860!1.90e-09!45;CL:0000134!2.49e-09!358;CL:0000063!6.25e-09!578;CL:0000192!1.97e-08!42;CL:0000514!1.97e-08!42;CL:0002009!3.11e-08!65;CL:0002194!3.58e-08!63;CL:0000576!3.58e-08!63;CL:0000040!3.58e-08!63;CL:0000559!3.58e-08!63;CL:0002334!8.94e-08!12;CL:0000557!1.29e-07!71;CL:0000219!1.54e-07!390;CL:0000393!5.16e-07!60;CL:0000211!5.16e-07!60;CL:0000839!7.01e-07!70 | |||
|ontology_enrichment_celltype_v019=CL:0002620;4.49e-12;23!CL:0000057;1.29e-11;73!CL:0000860;3.44e-09;33!CL:0002057;3.44e-09;33!CL:0000473;7.96e-08;39!CL:0000234;7.96e-08;39!CL:0002334;8.00e-08;12!CL:0002320;1.55e-07;188!CL:0000192;3.70e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.16e-28,76;CL:0000048,8.42e-17,427;CL:0000723,1.21e-16,433;CL:0000034,1.10e-14,441;CL:0000222,1.73e-14,121;CL:0002620,4.85e-12,23;CL:0000680,6.00e-11,58;CL:0000056,6.00e-11,58;CL:0000355,6.00e-11,58;CL:0002320,7.11e-11,361;CL:0000187,3.64e-10,55;CL:0000860,1.55e-09,42;CL:0002057,1.55e-09,42;CL:0000473,1.61e-09,48;CL:0000234,1.61e-09,48;CL:0000134,2.02e-09,354;CL:0000192,5.65e-09,43;CL:0000514,5.65e-09,43;CL:0002009,6.13e-08,61;CL:0002194,7.04e-08,59;CL:0000576,7.04e-08,59;CL:0000040,7.04e-08,59;CL:0000559,7.04e-08,59;CL:0002334,7.98e-08,12;CL:0000219,1.10e-07,386;CL:0000393,2.25e-07,61;CL:0000211,2.25e-07,61;CL:0000557,2.85e-07,67;CL:0002321,8.89e-07,250 | |||
|ontology_enrichment_development_v019=CL:0002057;2.26e-07;42!CL:0000514;3.70e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!1.19e-21!167;UBERON:0000926!6.21e-19!448;UBERON:0004120!6.21e-19!448;UBERON:0006603!6.21e-19!448;UBERON:0003081!2.37e-15!216;UBERON:0000914!8.06e-14!83;UBERON:0002329!8.06e-14!83;UBERON:0003077!8.06e-14!83;UBERON:0003059!8.06e-14!83;UBERON:0007282!8.06e-14!83;UBERON:0009618!8.06e-14!83;UBERON:0007285!8.06e-14!83;UBERON:0000468!5.61e-13!659;UBERON:0004290!3.03e-12!70;UBERON:0000480!6.93e-12!626;UBERON:0000467!7.25e-12!625;UBERON:0004765!9.52e-12!101;UBERON:0001434!9.52e-12!101;UBERON:0000486!1.28e-11!82;UBERON:0002384!1.48e-11!375;UBERON:0001474!7.95e-10!86;UBERON:0003102!9.59e-10!95;UBERON:0002199!1.00e-09!45;UBERON:0002416!1.00e-09!45;UBERON:0001134!1.83e-09!61;UBERON:0002036!1.83e-09!61;UBERON:0003082!1.83e-09!61;UBERON:0001637!3.14e-09!42;UBERON:0003509!3.14e-09!42;UBERON:0004572!3.14e-09!42;UBERON:0004872!3.65e-09!84;UBERON:0000923!4.26e-09!604;UBERON:0005291!4.26e-09!604;UBERON:0006598!4.26e-09!604;UBERON:0002532!4.26e-09!604;UBERON:0002050!5.01e-09!605;UBERON:0005423!5.01e-09!605;UBERON:0002385!5.62e-09!63;UBERON:0001015!5.62e-09!63;UBERON:0000383!5.62e-09!63;UBERON:0001981!7.40e-09!60;UBERON:0007500!7.40e-09!60;UBERON:0004537!7.40e-09!60;UBERON:0006965!7.40e-09!60;UBERON:0002097!9.35e-09!40;UBERON:0002371!1.38e-08!80;UBERON:0002049!2.14e-08!79;UBERON:0007798!2.14e-08!79;UBERON:0005256!3.07e-08!143;UBERON:0004573!3.93e-08!33;UBERON:0004571!3.93e-08!33;UBERON:0000055!3.97e-08!69;UBERON:0000922!7.40e-08!612;UBERON:0002100!6.21e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0002384;5.72e-08;198!UBERON:0004573;1.26e-07;33!UBERON:0004571;1.26e-07;33!UBERON:0001637;2.83e-07;42!UBERON:0003509;2.83e-07;42!UBERON:0004572;2.83e-07;42!UBERON:0002097;4.29e-07;41!UBERON:0003102;5.27e-07;50!UBERON:0002199;9.67e-07;46!UBERON:0002416;9.67e-07;46 | |||
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| ||
|short_description=p2@PLEC | |||
}} | }} |
Latest revision as of 23:58, 16 September 2015
Short description: | p2@PLEC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PLEC_5end |
Coexpression cluster: | C4734_Fibroblast_Smooth_Mesenchymal_Preadipocyte_Keratocytes_Chondrocyte_melanoma |
Association with transcript: | -30bp_to_ENST00000322810, NM_201380, uc003zaf.1_5end |
EntrezGene: | PLEC |
HGNC: | 9069 |
UniProt: | Q15149 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.16e-28 | 76 |
multi fate stem cell | 8.42e-17 | 427 |
somatic stem cell | 1.21e-16 | 433 |
stem cell | 1.10e-14 | 441 |
mesodermal cell | 1.73e-14 | 121 |
skin fibroblast | 4.85e-12 | 23 |
muscle precursor cell | 6.00e-11 | 58 |
myoblast | 6.00e-11 | 58 |
multi-potent skeletal muscle stem cell | 6.00e-11 | 58 |
connective tissue cell | 7.11e-11 | 361 |
muscle cell | 3.64e-10 | 55 |
classical monocyte | 1.55e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.55e-09 | 42 |
defensive cell | 1.61e-09 | 48 |
phagocyte | 1.61e-09 | 48 |
mesenchymal cell | 2.02e-09 | 354 |
smooth muscle cell | 5.65e-09 | 43 |
smooth muscle myoblast | 5.65e-09 | 43 |
macrophage dendritic cell progenitor | 6.13e-08 | 61 |
monopoietic cell | 7.04e-08 | 59 |
monocyte | 7.04e-08 | 59 |
monoblast | 7.04e-08 | 59 |
promonocyte | 7.04e-08 | 59 |
preadipocyte | 7.98e-08 | 12 |
motile cell | 1.10e-07 | 386 |
electrically responsive cell | 2.25e-07 | 61 |
electrically active cell | 2.25e-07 | 61 |
granulocyte monocyte progenitor cell | 2.85e-07 | 67 |
embryonic cell | 8.89e-07 | 250 |