FFCP PHASE1:Hg19::chr10:128076861..128076899,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:128076861..128076899,-
|short_description=p3@ADAM12
|description=CAGE_peak_3_at_ADAM12_5end
|association_with_transcript=124bp_to_ENST00000368676,ENST0000...") |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8038 | |EntrezGene=8038 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=190 | |HGNC=190 | ||
|UniProt=O43184, | |TSSclassifier=strong | ||
|UniProt=O43184,Q5JRP2 | |||
|association_with_transcript=124bp_to_ENST00000368676,ENST00000368679,ENST00000448723_5end | |||
|cluster_id=chr10:128076861..128076899,- | |||
|description=CAGE_peak_3_at_ADAM12_5end | |||
|id=chr10:128076861..128076899,- | |||
|ontology_enrichment_celltype=CL:0000055!7.17e-35!180;CL:0000680!1.30e-16!57;CL:0000056!1.30e-16!57;CL:0000355!1.30e-16!57;CL:0000057!7.28e-16!75;CL:0000187!3.05e-15!54;CL:0000183!4.70e-15!59;CL:0000192!2.16e-13!42;CL:0000514!2.16e-13!42;CL:0000393!5.54e-12!60;CL:0000211!5.54e-12!60;CL:0000359!1.89e-11!32;CL:0000048!1.91e-08!430;CL:0000136!3.60e-08!15;CL:0000723!8.97e-08!436;CL:0002620!1.44e-07!23;CL:0000034!3.14e-07!444;CL:0000499!8.42e-07!27 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.75e-12;32!CL:0000192;9.90e-11;43!CL:0000134;1.10e-10;55!CL:0000723;8.67e-10;61!CL:0000048;1.08e-09;58!CL:0000187;2.34e-09;55!CL:0002320;1.52e-08;188!CL:0000499;1.94e-08;28!CL:0002620;2.45e-08;23!CL:0000136;4.44e-08;13!CL:0000393;5.00e-08;61!CL:0000211;5.00e-08;61!CL:0002334;3.66e-07;12!CL:0000057;3.67e-07;73!CL:0000034;5.09e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,1.12e-18,58;CL:0000056,1.12e-18,58;CL:0000355,1.12e-18,58;CL:0000057,6.98e-18,76;CL:0000048,1.63e-17,427;CL:0000187,4.70e-17,55;CL:0000723,1.09e-16,433;CL:0000034,3.24e-15,441;CL:0000192,4.87e-15,43;CL:0000514,4.87e-15,43;CL:0000393,3.04e-14,61;CL:0000211,3.04e-14,61;CL:0000359,5.72e-13,32;CL:0000136,1.57e-09,15;CL:0000499,2.01e-08,28;CL:0002620,2.87e-08,23;CL:0002320,7.36e-08,361;CL:0000222,9.69e-08,121;CL:0002334,2.94e-07,12 | |||
|ontology_enrichment_development_v019=CL:0000514;9.90e-11;43!CL:0000355;9.02e-10;58 | |||
|ontology_enrichment_disease=DOID:2394!7.29e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.75e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.86e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!3.95e-17!83;UBERON:0002329!3.95e-17!83;UBERON:0003077!3.95e-17!83;UBERON:0003059!3.95e-17!83;UBERON:0007282!3.95e-17!83;UBERON:0009618!3.95e-17!83;UBERON:0007285!3.95e-17!83;UBERON:0004290!6.45e-17!70;UBERON:0001134!7.26e-16!61;UBERON:0002036!7.26e-16!61;UBERON:0003082!7.26e-16!61;UBERON:0002385!2.45e-15!63;UBERON:0001015!2.45e-15!63;UBERON:0000383!2.45e-15!63;UBERON:0000486!6.49e-14!82;UBERON:0000475!5.42e-09!365;UBERON:0001637!1.16e-08!42;UBERON:0003509!1.16e-08!42;UBERON:0004572!1.16e-08!42;UBERON:0004573!3.00e-08!33;UBERON:0004571!3.00e-08!33;UBERON:0005256!1.45e-07!143;UBERON:0004872!3.67e-07!84;UBERON:0001013!5.43e-07!14;UBERON:0002049!5.63e-07!79;UBERON:0007798!5.63e-07!79;UBERON:0002199!5.75e-07!45;UBERON:0002416!5.75e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0002384;1.84e-08;198!UBERON:0002385;2.38e-08;31!UBERON:0001015;2.38e-08;31!UBERON:0000383;2.38e-08;31!UBERON:0001013;4.68e-08;14!UBERON:0004573;5.17e-08;33!UBERON:0004571;5.17e-08;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002329,1.82e-18,71;UBERON:0003059,1.82e-18,71;UBERON:0007282,1.82e-18,71;UBERON:0004290,1.82e-18,71;UBERON:0009618,1.82e-18,71;UBERON:0007524,2.55e-18,73;UBERON:0003077,6.75e-18,72;UBERON:0007285,6.75e-18,72;UBERON:0001134,1.20e-17,62;UBERON:0002036,1.20e-17,62;UBERON:0003082,1.20e-17,62;UBERON:0002385,1.85e-16,64;UBERON:0001015,1.85e-16,64;UBERON:0000383,1.85e-16,64;UBERON:0007503,7.66e-16,78;UBERON:0000486,7.35e-15,83;UBERON:0001637,1.33e-09,42;UBERON:0003509,1.33e-09,42;UBERON:0004572,1.33e-09,42;UBERON:0005256,4.20e-09,122;UBERON:0004573,5.92e-09,33;UBERON:0004571,5.92e-09,33;UBERON:0002384,1.41e-08,371;UBERON:0001013,4.12e-08,14;UBERON:0003104,1.21e-07,160;UBERON:0009142,1.21e-07,160;UBERON:0002199,3.29e-07,46;UBERON:0002416,3.29e-07,46;UBERON:0002049,5.06e-07,78;UBERON:0007798,5.06e-07,78 | |||
|phase1_expression=9.08391896352783,14.9870366723688,18.1831181283803,4.00293193412522,10.7270662662549,9.59572376510406,7.59899634504932,12.0026775951098,15.1487664355906,0.491467873003018,0,0,0,8.04481294240303,14.5814845320283,6.72325146451775,5.42425075221579,5.84248072309899,8.78279037822912,9.84968464614303,9.79203317972414,16.9265549598167,4.00730381983479,10.1287074553934,4.3939923858181,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0.553995408531877,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0.590129310341499,0,0,0,0,0,0,0,0.294605907474837,0.443067789167242,0.270803863765016,0.640456598628376,0,0,0,0,0,0,0,0.453237370790265,0.766440987203842,0,0,0,0,0,0,0.255973222308837,0,0,0,0,0,0.144824403882799,2.43806866313962,0,0.639312809217652,13.373248638229,14.0374614978049,14.1949588581607,37.3784395114017,45.7436778084478,3.78139268656271,3.54767035940102,2.54720878510066,0.392937226493138,0,0.370784442784429,0.324547393654683,0.522389211897802,0.797747763113191,0,0,0,0.198762407366705,3.4409383804245,0.347140501607594,0,0,0.275118041940067,0,0,0.35576626268671,0,0.402829317109147,0,0,0,0.81014194788176,0,0,0,0,0.949265659568129,0,0,0,0,34.291064666977,8.35761376986227,32.8374768416783,39.8702902840851,17.3787507277195,2.80338800071154,4.2699598291882,9.12669929143492,2.8008993185979,0.808264032418128,0.817309515567294,31.0282726672109,43.2131943359999,0.70296429550139,3.43376084513353,1.71141546463335,2.39117888882882,0.704606991862589,2.26622122115384,2.10676210053373,3.26646674007829,0.61417158655884,2.06651562351531,7.12801714369232,6.18167323196392,10.9219363432563,4.31170885089743,0.336672227908132,1.62654075833553,1.6623846929051,10.5354629011401,5.21029252858333,7.81237906314303,1.36118619792025,7.17558542755448,11.5320989962026,28.1869428542217,10.8032794590385,11.8510408624205,6.44101350114073,9.1197259602479,31.2236214646343,14.0309287432126,8.33031455005578,11.2300876343605,5.17267381820198,8.87523981291536,4.83610071492673,6.78242369241951,0,0.272746120590835,0.286804595389004,0.121973706129595,0,0.464775771478074,0.621966330092223,0.252320850875628,0.72995471815166,4.69348596989448,6.43240938192885,2.76269842704961,0.928735856063958,1.44375896333917,0.828147600278907,0.337169380156203,0.241011029883482,0.330881918197182,0.435758888184812,0.71181185733329,0.404493924480493,0.392442930250692,0.38474715694639,0,1.40241773803446,5.7620361586396,1.47008711385542,0,0,0,0,0,9.26466175612038,0,0,0,0,0,0,8.6598805215164,1.73895607462615,9.27528684462991,0.288732895522148,0,0,0,0,0,0,0,0,0.16798212819886,0,0.0895585227028483,0,0,32.0231104632363,22.5403991073859,6.63449969730471,3.31475892859011,5.17593977048158,0.571481048629521,0.381988425558278,0,5.13217338068116,0.308482478109971,1.20137223137567,1.14330573052231,4.26098120512371,8.28324130783232,6.96713715299025,56.6210115019067,3.57656445851882,15.215449546008,29.2531928243358,14.5610411675913,0.771622122786426,2.83698264046557,1.0656887160644,1.57275793023962,0.542621605391443,0.823240336780769,4.56030658011229,0.355391948742546,0.791951872933429,5.12446941001296,10.4584015032035,1.79951384127703,0,0,0,31.1512312139057,11.4861935834114,9.98458335285029,12.740754986747,21.985966512891,10.206474904674,0,0.591092280605782,0.646882724578552,0,2.7950408664471,5.20559415430487,0,2.34522771468088,0,0,0,0,9.20186187893549,3.00102312635806,4.34024037919577,13.1021642764408,14.9880350589616,6.15039418632345,15.6969496090236,4.51419149591578,6.82222512167955,7.24311499047534,19.2625423575277,15.4870101575031,6.25562024170197,11.5522682903017,15.0983106476777,0.206768026122887,0,0.213455115606889,0,0,1.20956117331872,5.45837177201309,9.66810431714793,13.7523446272206,26.9092213436972,14.8395102229344,30.5622450172854,1.48418066444991,10.0236300971726,21.3074070375752,14.7828880824856,7.78881643775432,9.87788216909654,0,0,0,25.4888074925427,23.1255783368531,9.57208229203796,0,0.385076685522074,0,0,1.05551628892876,1.13733384070897,0,0.215915916102139,0,0.270946437543853,1.00337954770971,0,0,0.447749509444357,0,0,0,0.328014645699706,0.325378394664303,16.7956848985787,0.915694648183434,0.907604499126468,0.574265537996172,0,14.4615536859744,11.117132603594,5.69979883324184,5.2191249406884,1.7918754422989,5.26359199854541,4.35050081742686,9.2044757609389,34.900557973521,0,0.384380134730212,0.510450849978337,0,2.32422774648643,36.5182322323543,8.3644472419272,4.92853728281742,10.1138145760234,9.5692629128258,9.08088673609208,7.87186877080952,12.281226188869,20.8810420314359,7.05331717518152,2.55897791311334,2.99557291623744,10.8189104294818,7.06453776179307,5.03642881233281,14.0013885165388,12.9593642580255,11.7265839312523,9.5106192703805,9.26768603725758,0.48763373908959,13.8916689089832,7.39551027297288,3.27599787379166,7.63589332550049,9.04064932961942,8.82184549673799,5.30751180192976,5.26141062304515,3.47265320560013,5.24715801637306,21.914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| ||
|short_description=p3@ADAM12 | |||
}} | }} |
Latest revision as of 00:22, 17 September 2015
Short description: | p3@ADAM12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ADAM12_5end |
Coexpression cluster: | NA |
Association with transcript: | 124bp_to_ENST00000368676, ENST00000368679, ENST00000448723_5end |
EntrezGene: | ADAM12 |
HGNC: | 190 |
UniProt: | O43184Q5JRP2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 1.12e-18 | 58 |
myoblast | 1.12e-18 | 58 |
multi-potent skeletal muscle stem cell | 1.12e-18 | 58 |
fibroblast | 6.98e-18 | 76 |
multi fate stem cell | 1.63e-17 | 427 |
muscle cell | 4.70e-17 | 55 |
somatic stem cell | 1.09e-16 | 433 |
stem cell | 3.24e-15 | 441 |
smooth muscle cell | 4.87e-15 | 43 |
smooth muscle myoblast | 4.87e-15 | 43 |
electrically responsive cell | 3.04e-14 | 61 |
electrically active cell | 3.04e-14 | 61 |
vascular associated smooth muscle cell | 5.72e-13 | 32 |
fat cell | 1.57e-09 | 15 |
stromal cell | 2.01e-08 | 28 |
skin fibroblast | 2.87e-08 | 23 |
connective tissue cell | 7.36e-08 | 361 |
mesodermal cell | 9.69e-08 | 121 |
preadipocyte | 2.94e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
somite | 1.82e-18 | 71 |
presomitic mesoderm | 1.82e-18 | 71 |
presumptive segmental plate | 1.82e-18 | 71 |
dermomyotome | 1.82e-18 | 71 |
trunk paraxial mesoderm | 1.82e-18 | 71 |
dense mesenchyme tissue | 2.55e-18 | 73 |
paraxial mesoderm | 6.75e-18 | 72 |
presumptive paraxial mesoderm | 6.75e-18 | 72 |
skeletal muscle tissue | 1.20e-17 | 62 |
striated muscle tissue | 1.20e-17 | 62 |
myotome | 1.20e-17 | 62 |
muscle tissue | 1.85e-16 | 64 |
musculature | 1.85e-16 | 64 |
musculature of body | 1.85e-16 | 64 |
epithelial vesicle | 7.66e-16 | 78 |
multilaminar epithelium | 7.35e-15 | 83 |
artery | 1.33e-09 | 42 |
arterial blood vessel | 1.33e-09 | 42 |
arterial system | 1.33e-09 | 42 |
trunk mesenchyme | 4.20e-09 | 122 |
systemic artery | 5.92e-09 | 33 |
systemic arterial system | 5.92e-09 | 33 |
connective tissue | 1.41e-08 | 371 |
adipose tissue | 4.12e-08 | 14 |
mesenchyme | 1.21e-07 | 160 |
entire embryonic mesenchyme | 1.21e-07 | 160 |
integument | 3.29e-07 | 46 |
integumental system | 3.29e-07 | 46 |
vasculature | 5.06e-07 | 78 |
vascular system | 5.06e-07 | 78 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.86e-09 | 14 |