FFCP PHASE1:Hg19::chr10:128076939..128076955,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8038 | |EntrezGene=8038 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=190 | |HGNC=190 | ||
|TSSclassifier=strong | |||
|UniProt=O43184,Q5JRP2 | |UniProt=O43184,Q5JRP2 | ||
|association_with_transcript=68bp_to_ENST00000368676,ENST00000368679,ENST00000448723_5end | |association_with_transcript=68bp_to_ENST00000368676,ENST00000368679,ENST00000448723_5end | ||
|cluster_id=chr10:128076939..128076955,- | |||
|coexpression_cluster_id=C34 | |coexpression_cluster_id=C34 | ||
|description=CAGE_peak_4_at_ADAM12_5end | |description=CAGE_peak_4_at_ADAM12_5end | ||
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|ontology_enrichment_celltype=CL:0000055!3.27e-30!180;CL:0000057!1.08e-15!75;CL:0000680!4.40e-14!57;CL:0000056!4.40e-14!57;CL:0000355!4.40e-14!57;CL:0000183!3.51e-13!59;CL:0000187!1.24e-12!54;CL:0000048!1.31e-10!430;CL:0000192!3.64e-10!42;CL:0000514!3.64e-10!42;CL:0000393!4.23e-10!60;CL:0000211!4.23e-10!60;CL:0000723!7.06e-10!436;CL:0000136!2.67e-09!15;CL:0000034!5.08e-09!444;CL:0000359!8.49e-09!32;CL:0002620!1.75e-07!23 | |ontology_enrichment_celltype=CL:0000055!3.27e-30!180;CL:0000057!1.08e-15!75;CL:0000680!4.40e-14!57;CL:0000056!4.40e-14!57;CL:0000355!4.40e-14!57;CL:0000183!3.51e-13!59;CL:0000187!1.24e-12!54;CL:0000048!1.31e-10!430;CL:0000192!3.64e-10!42;CL:0000514!3.64e-10!42;CL:0000393!4.23e-10!60;CL:0000211!4.23e-10!60;CL:0000723!7.06e-10!436;CL:0000136!2.67e-09!15;CL:0000034!5.08e-09!444;CL:0000359!8.49e-09!32;CL:0002620!1.75e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0000134;1.08e-11;55!CL:0000723;6.67e-11;61!CL:0000048;8.94e-11;58!CL:0000359;4.81e-10;32!CL:0000136;5.52e-10;13!CL:0000034;3.53e-08;69!CL:0000499;7.75e-08;28!CL:0000192;1.36e-07;43!CL:0002320;1.67e-07;188!CL:0000187;4.26e-07;55!CL:0002334;4.27e-07;12 | |ontology_enrichment_celltype_v019=CL:0000134;1.08e-11;55!CL:0000723;6.67e-11;61!CL:0000048;8.94e-11;58!CL:0000359;4.81e-10;32!CL:0000136;5.52e-10;13!CL:0000034;3.53e-08;69!CL:0000499;7.75e-08;28!CL:0000192;1.36e-07;43!CL:0002320;1.67e-07;188!CL:0000187;4.26e-07;55!CL:0002334;4.27e-07;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000048,3.21e-20,427;CL:0000723,3.61e-19,433;CL:0000034,7.99e-18,441;CL:0000057,4.02e-15,76;CL:0000680,3.28e-14,58;CL:0000056,3.28e-14,58;CL:0000355,3.28e-14,58;CL:0000187,1.78e-12,55;CL:0000136,1.21e-11,15;CL:0002320,2.10e-11,361;CL:0000192,9.65e-11,43;CL:0000514,9.65e-11,43;CL:0000359,1.95e-10,32;CL:0000393,5.03e-10,61;CL:0000211,5.03e-10,61;CL:0000134,1.20e-09,354;CL:0000219,6.53e-09,386;CL:0000499,4.22e-08,28;CL:0002334,4.87e-07,12 | |||
|ontology_enrichment_development_v019=CL:0000355;6.62e-08;58!CL:0000514;1.36e-07;43 | |ontology_enrichment_development_v019=CL:0000355;6.62e-08;58!CL:0000514;1.36e-07;43 | ||
|ontology_enrichment_disease=DOID:2394!4.82e-08!14 | |ontology_enrichment_disease=DOID:2394!4.82e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;2.82e-10;14 | |ontology_enrichment_disease_v019=DOID:2394;2.82e-10;14 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,2.61e-10,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!5.25e-13!83;UBERON:0002329!5.25e-13!83;UBERON:0003077!5.25e-13!83;UBERON:0003059!5.25e-13!83;UBERON:0007282!5.25e-13!83;UBERON:0009618!5.25e-13!83;UBERON:0007285!5.25e-13!83;UBERON:0004290!9.71e-13!70;UBERON:0001134!8.09e-12!61;UBERON:0002036!8.09e-12!61;UBERON:0003082!8.09e-12!61;UBERON:0002385!8.36e-12!63;UBERON:0001015!8.36e-12!63;UBERON:0000383!8.36e-12!63;UBERON:0000486!1.10e-09!82;UBERON:0000475!4.33e-07!365 | |ontology_enrichment_uberon=UBERON:0000914!5.25e-13!83;UBERON:0002329!5.25e-13!83;UBERON:0003077!5.25e-13!83;UBERON:0003059!5.25e-13!83;UBERON:0007282!5.25e-13!83;UBERON:0009618!5.25e-13!83;UBERON:0007285!5.25e-13!83;UBERON:0004290!9.71e-13!70;UBERON:0001134!8.09e-12!61;UBERON:0002036!8.09e-12!61;UBERON:0003082!8.09e-12!61;UBERON:0002385!8.36e-12!63;UBERON:0001015!8.36e-12!63;UBERON:0000383!8.36e-12!63;UBERON:0000486!1.10e-09!82;UBERON:0000475!4.33e-07!365 | ||
|ontology_enrichment_uberon_v019=UBERON:0002385;8.66e-09;31!UBERON:0001015;8.66e-09;31!UBERON:0000383;8.66e-09;31!UBERON:0002384;1.93e-08;198!UBERON:0001013;1.05e-07;14 | |ontology_enrichment_uberon_v019=UBERON:0002385;8.66e-09;31!UBERON:0001015;8.66e-09;31!UBERON:0000383;8.66e-09;31!UBERON:0002384;1.93e-08;198!UBERON:0001013;1.05e-07;14 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.16e-12,371;UBERON:0001134,2.18e-12,62;UBERON:0002036,2.18e-12,62;UBERON:0003082,2.18e-12,62;UBERON:0002329,1.18e-11,71;UBERON:0003059,1.18e-11,71;UBERON:0007282,1.18e-11,71;UBERON:0004290,1.18e-11,71;UBERON:0009618,1.18e-11,71;UBERON:0002385,1.41e-11,64;UBERON:0001015,1.41e-11,64;UBERON:0000383,1.41e-11,64;UBERON:0007524,1.80e-11,73;UBERON:0003077,2.70e-11,72;UBERON:0007285,2.70e-11,72;UBERON:0007503,2.28e-09,78;UBERON:0000486,3.55e-09,83;UBERON:0001013,1.19e-07,14;UBERON:0001637,2.90e-07,42;UBERON:0003509,2.90e-07,42;UBERON:0004572,2.90e-07,42 | |||
|phase1_expression=3.45188920614058,12.631930909568,10.5715803071978,1.0007329835313,1.78784437770915,3.48935409640147,7.59899634504932,5.05375898741465,7.31319758959548,0,0,0.218441372130172,0,3.96052329472149,4.30816588446291,2.01697543935533,3.61616716814386,2.19093027116212,2.92759679274304,5.41732655537867,4.28401451612931,11.9112794161673,3.72106783270374,3.69560947696787,1.75759695432724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0.294605907474837,0.221533894583621,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.383587685530591,2.89151321907653,3.50936537445123,8.11140506180613,17.4962908351242,12.6525066278685,2.07976597760949,1.77383517970051,0.966182642624386,0.261958150995425,0,0,0,0.174129737299267,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,1.31780417436063,0,0,7.45457927542978,2.15271869829786,9.00382429529888,8.89193524321323,7.4480360261655,0.560677600142307,1.06748995729705,2.96001058100592,0.311211035399766,0,0.326923806226917,11.3518070733699,10.37116664064,1.17160715916898,0.936480230490962,2.2818872861778,0.747243402759005,1.40921398372518,0.971237666208789,0.842704840213491,0.816616685019573,0.368502951935304,1.44656093646072,1.18800285728205,1.48360157567134,1.82032272387605,6.46756327634615,0.336672227908132,1.62654075833553,1.10825646193673,3.5118209670467,2.75839016219118,2.40380894250555,0.567160915800105,2.69084453533293,5.12537733164562,9.96079935449941,6.00182192168805,3.81294358182224,1.8034837803194,2.97786970130544,10.4641325989585,4.48210223741514,3.28163906517349,5.61504381718026,0.969876340912871,2.13005755509969,1.91428986632517,2.7129694769678,0,0,0,0.121973706129595,0,0,0.829288440122964,0,0,1.56449532329816,3.21620469096443,0,0.464367928031979,0.721879481669586,0.709840800239063,0.505754070234305,0.482022059766964,0.882351781859152,0.217879444092406,0.474541238222193,0.943819157121151,0.98110732562673,0.38474715694639,0.738155454624648,0,0.8231480226628,1.47008711385542,0,0,0,0,0,2.91665277507493,0,0,0,0,0,0,0,0.695582429850461,2.46558257895225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.2725603747742,10.125569911521,2.48793738648926,1.15295962733569,2.90357596880674,0.507983154337352,0,0,0,0.616964956219941,1.20137223137567,0.571652865261156,1.90622843387113,2.1798003441664,3.44689943358465,25.3372562885244,0,3.381211010224,9.57377219705534,8.32059495290929,0.514414748524284,4.25547396069835,1.5985330740966,0.285955987316295,0,1.64648067356154,2.60588947434988,0.710783897485092,0.791951872933429,2.41151501647669,4.35766729300147,0.399891964728228,0,0,0,6.46987109827273,1.14861935834114,1.42636905040718,5.93603357337075,9.65738715986802,4.65558504423729,0,0,0,0,2.54094624222463,1.30139853857622,0,0.837581326671744,0,0,0,0,3.55805325985506,2.00068208423871,1.35632511849868,4.78332981520856,6.42344359669782,2.99634588564476,4.33423235473039,1.80567659836631,2.27407504055985,0,7.3064815838898,7.37476674166813,2.78027566297865,6.06983588134496,1.71571711905428,0,0,0.106727557803444,0,0,0,2.23297027036899,3.83654933220156,5.05188169979532,9.73857534343327,2.55853624533352,10.4555048743345,0,5.70575867069826,7.63515418846446,4.68124789278712,2.07701771673448,4.41599438147845,0,0,0,8.03701137152247,8.01201139229555,1.57349297951309,0.451199612907412,0.0770153371044148,0,0,0.105551628892876,0,0.170093705276516,0.431831832204279,0,0.541892875087706,0.501689773854853,0,0,0.447749509444357,0,0,0,0,0,50.9022597539748,0.824125183365091,0.330037999682352,0.574265537996172,0,0,2.70678011217942,4.62145851343933,3.53058451870098,0.964856007391714,3.33002759091648,2.90033387828457,4.26133137080504,12.3754529548965,0,0.384380134730212,0.382838137483752,0,1.39453664789186,5.66662224295152,5.5762981612848,2.46426864140871,5.85536633348724,4.34966496037536,2.96518750566272,1.86062352764589,6.32669227911434,2.84741482246853,1.5250415513906,0.767693373934002,0.855877976067841,4.45484547096312,1.56989728039846,2.87795932133304,7.41249980287348,6.24405732432138,3.63928466831969,3.17020642346017,2.94880919367287,0,5.84912375115083,0,1.50149902548784,1.27264888758341,3.39024349860728,1.10273068709225,0,0,1.15755106853338,0.655894752046633,8.72514620939627,3.717881977197,2.25356482025793,0.430234056612155,0.687743287091848,5.7067368237,1.06428319221179,2.9555068941673,2.63435914367922,1.13841952129715,0.349934720244983,0,0.670302275535787,0,43.8710111619791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.71381899160387,0,0,0,3.10367830158997,0,0,0,0,2.33748280548102,0,0,0,1.38141957765574,0,1.1249555075237,0,3.11039587661807,0,0,0,1.479651084554,0,7.77958931012458,0,0.463840490809256,0,0,0,5.07499702804355,0,0,0.709163045303809,0,0,0,0,0.844175070377856,0,0.663475559587348,0.886642856860642,0.219385397153973,0,0,0.692552326534174,2.734609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| |phase1_expression=3.45188920614058,12.631930909568,10.5715803071978,1.0007329835313,1.78784437770915,3.48935409640147,7.59899634504932,5.05375898741465,7.31319758959548,0,0,0.218441372130172,0,3.96052329472149,4.30816588446291,2.01697543935533,3.61616716814386,2.19093027116212,2.92759679274304,5.41732655537867,4.28401451612931,11.9112794161673,3.72106783270374,3.69560947696787,1.75759695432724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0.294605907474837,0.221533894583621,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.383587685530591,2.89151321907653,3.50936537445123,8.11140506180613,17.4962908351242,12.6525066278685,2.07976597760949,1.77383517970051,0.966182642624386,0.261958150995425,0,0,0,0.174129737299267,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,1.31780417436063,0,0,7.45457927542978,2.15271869829786,9.00382429529888,8.89193524321323,7.4480360261655,0.560677600142307,1.06748995729705,2.96001058100592,0.311211035399766,0,0.326923806226917,11.3518070733699,10.37116664064,1.17160715916898,0.936480230490962,2.2818872861778,0.747243402759005,1.40921398372518,0.971237666208789,0.842704840213491,0.816616685019573,0.368502951935304,1.44656093646072,1.18800285728205,1.48360157567134,1.82032272387605,6.46756327634615,0.336672227908132,1.62654075833553,1.10825646193673,3.5118209670467,2.75839016219118,2.40380894250555,0.567160915800105,2.69084453533293,5.12537733164562,9.96079935449941,6.00182192168805,3.81294358182224,1.8034837803194,2.97786970130544,10.4641325989585,4.48210223741514,3.28163906517349,5.61504381718026,0.969876340912871,2.13005755509969,1.91428986632517,2.7129694769678,0,0,0,0.121973706129595,0,0,0.829288440122964,0,0,1.56449532329816,3.21620469096443,0,0.464367928031979,0.721879481669586,0.709840800239063,0.505754070234305,0.482022059766964,0.882351781859152,0.217879444092406,0.474541238222193,0.943819157121151,0.98110732562673,0.38474715694639,0.738155454624648,0,0.8231480226628,1.47008711385542,0,0,0,0,0,2.91665277507493,0,0,0,0,0,0,0,0.695582429850461,2.46558257895225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.2725603747742,10.125569911521,2.48793738648926,1.15295962733569,2.90357596880674,0.507983154337352,0,0,0,0.616964956219941,1.20137223137567,0.571652865261156,1.90622843387113,2.1798003441664,3.44689943358465,25.3372562885244,0,3.381211010224,9.57377219705534,8.32059495290929,0.514414748524284,4.25547396069835,1.5985330740966,0.285955987316295,0,1.64648067356154,2.60588947434988,0.710783897485092,0.791951872933429,2.41151501647669,4.35766729300147,0.399891964728228,0,0,0,6.46987109827273,1.14861935834114,1.42636905040718,5.93603357337075,9.65738715986802,4.65558504423729,0,0,0,0,2.54094624222463,1.30139853857622,0,0.837581326671744,0,0,0,0,3.55805325985506,2.00068208423871,1.35632511849868,4.78332981520856,6.42344359669782,2.99634588564476,4.33423235473039,1.80567659836631,2.27407504055985,0,7.3064815838898,7.37476674166813,2.78027566297865,6.06983588134496,1.71571711905428,0,0,0.106727557803444,0,0,0,2.23297027036899,3.83654933220156,5.05188169979532,9.73857534343327,2.55853624533352,10.4555048743345,0,5.70575867069826,7.63515418846446,4.68124789278712,2.07701771673448,4.41599438147845,0,0,0,8.03701137152247,8.01201139229555,1.57349297951309,0.451199612907412,0.0770153371044148,0,0,0.105551628892876,0,0.170093705276516,0.431831832204279,0,0.541892875087706,0.501689773854853,0,0,0.447749509444357,0,0,0,0,0,50.9022597539748,0.824125183365091,0.330037999682352,0.574265537996172,0,0,2.70678011217942,4.62145851343933,3.53058451870098,0.964856007391714,3.33002759091648,2.90033387828457,4.26133137080504,12.3754529548965,0,0.384380134730212,0.382838137483752,0,1.39453664789186,5.66662224295152,5.5762981612848,2.46426864140871,5.85536633348724,4.34966496037536,2.96518750566272,1.86062352764589,6.32669227911434,2.84741482246853,1.5250415513906,0.767693373934002,0.855877976067841,4.45484547096312,1.56989728039846,2.87795932133304,7.41249980287348,6.24405732432138,3.63928466831969,3.17020642346017,2.94880919367287,0,5.84912375115083,0,1.50149902548784,1.27264888758341,3.39024349860728,1.10273068709225,0,0,1.15755106853338,0.655894752046633,8.72514620939627,3.717881977197,2.25356482025793,0.430234056612155,0.687743287091848,5.7067368237,1.06428319221179,2.9555068941673,2.63435914367922,1.13841952129715,0.349934720244983,0,0.670302275535787,0,43.8710111619791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.71381899160387,0,0,0,3.10367830158997,0,0,0,0,2.33748280548102,0,0,0,1.38141957765574,0,1.1249555075237,0,3.11039587661807,0,0,0,1.479651084554,0,7.77958931012458,0,0.463840490809256,0,0,0,5.07499702804355,0,0,0.709163045303809,0,0,0,0,0.844175070377856,0,0.663475559587348,0.886642856860642,0.219385397153973,0,0,0.692552326534174,2.734609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| ||
|short_description=p4@ADAM12 | |short_description=p4@ADAM12 | ||
}} | }} |
Latest revision as of 00:23, 17 September 2015
Short description: | p4@ADAM12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ADAM12_5end |
Coexpression cluster: | C34_placenta_chorionic_choriocarcinoma_mesothelioma_Wilms_Smooth_bile |
Association with transcript: | 68bp_to_ENST00000368676, ENST00000368679, ENST00000448723_5end |
EntrezGene: | ADAM12 |
HGNC: | 190 |
UniProt: | O43184Q5JRP2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 3.21e-20 | 427 |
somatic stem cell | 3.61e-19 | 433 |
stem cell | 7.99e-18 | 441 |
fibroblast | 4.02e-15 | 76 |
muscle precursor cell | 3.28e-14 | 58 |
myoblast | 3.28e-14 | 58 |
multi-potent skeletal muscle stem cell | 3.28e-14 | 58 |
muscle cell | 1.78e-12 | 55 |
fat cell | 1.21e-11 | 15 |
connective tissue cell | 2.10e-11 | 361 |
smooth muscle cell | 9.65e-11 | 43 |
smooth muscle myoblast | 9.65e-11 | 43 |
vascular associated smooth muscle cell | 1.95e-10 | 32 |
electrically responsive cell | 5.03e-10 | 61 |
electrically active cell | 5.03e-10 | 61 |
mesenchymal cell | 1.20e-09 | 354 |
motile cell | 6.53e-09 | 386 |
stromal cell | 4.22e-08 | 28 |
preadipocyte | 4.87e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.16e-12 | 371 |
skeletal muscle tissue | 2.18e-12 | 62 |
striated muscle tissue | 2.18e-12 | 62 |
myotome | 2.18e-12 | 62 |
somite | 1.18e-11 | 71 |
presomitic mesoderm | 1.18e-11 | 71 |
presumptive segmental plate | 1.18e-11 | 71 |
dermomyotome | 1.18e-11 | 71 |
trunk paraxial mesoderm | 1.18e-11 | 71 |
muscle tissue | 1.41e-11 | 64 |
musculature | 1.41e-11 | 64 |
musculature of body | 1.41e-11 | 64 |
dense mesenchyme tissue | 1.80e-11 | 73 |
paraxial mesoderm | 2.70e-11 | 72 |
presumptive paraxial mesoderm | 2.70e-11 | 72 |
epithelial vesicle | 2.28e-09 | 78 |
multilaminar epithelium | 3.55e-09 | 83 |
adipose tissue | 1.19e-07 | 14 |
artery | 2.90e-07 | 42 |
arterial blood vessel | 2.90e-07 | 42 |
arterial system | 2.90e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.61e-10 | 14 |