FFCP PHASE1:Hg19::chr17:66597345..66597366,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54757 | |EntrezGene=54757 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23015 | |HGNC=23015 | ||
|TSSclassifier=strong | |||
|UniProt=Q96MK3,B7Z4Y3,Q8IYA5 | |UniProt=Q96MK3,B7Z4Y3,Q8IYA5 | ||
|association_with_transcript=-250bp_to_ENST00000226094,NM_001243746,NM_017565,uc002jho.2,uc010wqp.1_5end | |association_with_transcript=-250bp_to_ENST00000226094,NM_001243746,NM_017565,uc002jho.2,uc010wqp.1_5end | ||
|cluster_id=chr17:66597345..66597366,- | |||
|coexpression_cluster_id=C1790 | |||
|description=CAGE_peak_5_at_FAM20A_5end | |description=CAGE_peak_5_at_FAM20A_5end | ||
|id=chr17:66597345..66597366,- | |id=chr17:66597345..66597366,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002570;5.54e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0002570,6.34e-07,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.55e-12!115;UBERON:0000062!3.04e-10!511;UBERON:0000468!8.06e-10!659;UBERON:0000926!2.93e-07!448;UBERON:0004120!2.93e-07!448;UBERON:0006603!2.93e-07!448;UBERON:0000467!7.09e-07!625;UBERON:0000991!7.44e-07!21;UBERON:0009196!7.44e-07!21;UBERON:0009117!7.44e-07!21;UBERON:0005564!7.44e-07!21;UBERON:0000480!8.97e-07!626 | |ontology_enrichment_uberon=UBERON:0007023!4.55e-12!115;UBERON:0000062!3.04e-10!511;UBERON:0000468!8.06e-10!659;UBERON:0000926!2.93e-07!448;UBERON:0004120!2.93e-07!448;UBERON:0006603!2.93e-07!448;UBERON:0000467!7.09e-07!625;UBERON:0000991!7.44e-07!21;UBERON:0009196!7.44e-07!21;UBERON:0009117!7.44e-07!21;UBERON:0005564!7.44e-07!21;UBERON:0000480!8.97e-07!626 | ||
|ontology_enrichment_uberon_v019=UBERON:0001013;2.15e-10;14!UBERON:0002119;4.47e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001013,2.58e-10,14;UBERON:0002119,5.23e-07,4 | |||
|phase1_expression=0.363356758541113,0.642301571672949,2.25527046553554,0,0.893922188854576,3.48935409640147,5.06599756336621,0,3.13422753839806,0,0,0,0,0.37129905888014,0.662794751455832,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0.154816123316076,0,0,0,0,0,0,0.553995408531877,0.200544447470142,0,2.68698569087909,0.971680998056939,1.28787783817093,0.581592955118259,0,0.242584061187816,0,0,0.619412741790207,5.17846306179871,3.84241059793651,1.89185783910868,0.344745680736619,0.645484683583826,0,0,0,0,0.918251677112708,0,0.639337125799041,5.60747210317417,2.59302754908121,1.70489900213078,0,0.56738522469114,0,3.76872997885115,3.12889751052121,2.38907729175628,0.605399502633369,0.368277635987565,0,0.211255286311942,0.212604299965044,0.419317291016752,0.112328631146495,0,0.16072558669708,0.855038231223746,0.59675003159727,0.547992461293902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.75227465255847,0.670700859703636,0,0,0,1.01392563272577,0,0,0.189069634328136,0,0,0.851363990735132,0,0,0.324547393654683,0.522389211897802,0.531831842075461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367663080345869,0,0,0,0,0,0,0.183201743930407,0,0,0,0.993943903390637,0,0.132409180813219,7.45775213946916,0.709336764396714,0,0,0,4.97937656639626,0,0,0,0,0.234321431833797,0.624320153660641,0.570471821544449,1.19558944441441,0,0,0,0.408308342509787,0.122834317311768,2.37649296704261,0,1.7308685049499,0.910161361938026,0,0,0,0,0,0,3.60571341375832,0,0.179389635688862,1.06778694409284,3.17897851739343,0.300091096084402,0.515262646192195,1.28820270022815,1.8611685633159,0,0,1.7670364197088,1.74894807420369,0.646584227275248,0,0.201504196455281,0.169560592310488,0,0,0,0.243947412259191,0.132529768321485,1.04574548582567,0.621966330092223,1.00928340350251,1.09493207722749,0,0,0,3.71494342425583,2.88751792667834,0,0,0,0,0,0,0,0,0,0,0,1.2347220339942,5.88034845542168,6.33775174109154,4.91413608338813,7.08947888017685,0,0.122988438543114,0.171567810298526,0,0,0,0,0,0,1.44331342025273,0,0.469634776943287,0,0,0,0,0,0.492434012174795,0.234004265139238,0,0,0.335964256397719,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,17.8828222925941,0,0.531876233169741,0,0.514414748524284,0,0,0.142977993658148,1.08524321078289,0,0,0.355391948742546,0,1.20575750823834,0,0.299918973546171,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,1.00034104211935,0.813795071099207,1.03985430765404,0,0,0,7.82459859292069,29.562975527278,2.0694614258501,0.664225598535437,0.184369168541703,1.39013783148933,0.587403472388222,0.686286847621712,0,0,0.213455115606889,0,0,0,0.744323423456331,0.920771839728375,1.12264037773229,3.45975702990393,0,0.965123526861645,5.93672265779964,0.154209693802656,2.84098760501003,1.23190734020714,1.55776328755086,1.04589340613963,0,0,0,2.06666006696292,0.546273504020151,1.18011973463482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.88514832613622,0,0,0,0,9.64103579064957,1.25671933779759,1.23238893691716,0.767518373630648,0,1.28904293841928,2.75531718437034,0.511359764496605,4.5406338179836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02359116524534,1.71175595213568,14.3191461566672,0,0.179872457583315,0.274537029736055,0.117812402345686,0.202182481573316,0,0,0,0.243713489631284,0,1.36499911407986,3.11091950298168,9.04064932961942,0,0,0,1.73632660280006,0.655894752046633,0,0.30982349809975,0,0,0,0,0,3.16661452946496,20.086988470554,0.379473173765715,1.39973888097993,0,0,0,2.63602642174982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0,0,0,0,0.796991953004279,0.276283915531148,0,0,0,0,0,0,0,0.493217028184668,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,1.31631238292384,0,0.278847488557207,1.07730361905316,0.455768223388005,0,0,0,0,0,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0.134802265961354,0,0.234264445725339,0,0,0,0.394584402849391,0,0,7.26645665727612,0,0,0,0,0,0,0,0,0,0,0,1.04836000945218,0,0,0,0,0.290967049465258,0,1.35588444468319,0,0,0.189932387867636,0,0,0.213452994739353,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0.273810757783986,0,0,0,0.558564802544508,0.458320848023367,1.43574604915363,0.399358000997982,1.71690419254628,0.446342914883745,0.268733889946905,0,0,0.315132729228895,0.329663433524666,0.0674035438541849,0.590564889088493,0,0,0.136203406111576,0.160753148465019,0,0,0,0,0.0607495566580247,0,1.10327990218877,0.262272940674991,0,0,0,0.714695326373367,0,0,13.0319904420891,3.45688596480507,3.26587360109409,0,0,0,0.113312091520126,5.71553711344522,1.32506888912221,0.129282956361551,0.13223260174269,0,0,1.17466153824464,2.51526888159466,3.72815149812476,1.9846640872478,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0.665574309221114,0.248385611765534,0,0,0,0,0,0,0,2.38807684618998,1.8697064787778,8.3220879225392,7.76552321627865,12.0752592841236,22.2452805399134,0.457680136793847,11.9472429772959,1.86524640699337,0.443565449968902,1.27437413730962,2.24901556081802,3.26052209440145,13.2705986509074,0.265841714557995,0,2.25386413495828,1.14241563650639,0,0.181848659202559,0.107410557042488,5.56840511854192,5.97143833047924,0,2.06037423109676,1.01024846629776,0,0,0.214441591374926,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,1.41070377476274,0,0.128458450192919,0,0.319267718114302,0,0.252071696221718,0.276629009856872,0,1.42769420259154,0,0,0,0,0,0,0.198916222116275,1.42899623863589,0,0,0,0,0,0.270150338473579,0.781078098613847,0,0.126831620387814,0,28.5094038765735,0.496211178389294,0.175871244359621,0,0.535701835878287,0.336283722218824,1.21393120847326,1.13831095675649,0.266107110487916,0,0,0.0679697329768317,0.131545547125698,0,0.333694205676207,0.78493092850514,0,0,0,0,0,1.71543706023975,0,0,0,1.60342272946051,0,0,0,20.220685864553,0.236664001461131,0,0.846774100381858,0,0,0,0,0,0,0,0.410651227424988,0,0,0,0,0,0.11294608203896,0,0,0.231522474323834,0,0,0,0,0.196308467114945,0,0.8453114551668,0,0.375935671919414,0.322289439867886,0,0,0,0,0.730336388246517,13.7618785021362,0,0,0.271965960763659,0,0,4.83593523616777,4.62175628631418,4.75889218336168,0,0.218531143927391,0,0.509944148709909,0.534434810531121,1.01084389488329,0.250707539292375,1.66713136080127,0.267964130156178,0.829169439458779,0,2.13233981900981,0,0.129177819672012,0.31037357147929,0,1.33659032384146,0.404234377916439,0.435433495793923,0,0.471464371102113,2.51027718874367,2.66128285236811,0,0,0,0,0,2.32258743947446,1.22068853494722,0.665756774185513,0.402547587182052,0 | |phase1_expression=0.363356758541113,0.642301571672949,2.25527046553554,0,0.893922188854576,3.48935409640147,5.06599756336621,0,3.13422753839806,0,0,0,0,0.37129905888014,0.662794751455832,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0.154816123316076,0,0,0,0,0,0,0.553995408531877,0.200544447470142,0,2.68698569087909,0.971680998056939,1.28787783817093,0.581592955118259,0,0.242584061187816,0,0,0.619412741790207,5.17846306179871,3.84241059793651,1.89185783910868,0.344745680736619,0.645484683583826,0,0,0,0,0.918251677112708,0,0.639337125799041,5.60747210317417,2.59302754908121,1.70489900213078,0,0.56738522469114,0,3.76872997885115,3.12889751052121,2.38907729175628,0.605399502633369,0.368277635987565,0,0.211255286311942,0.212604299965044,0.419317291016752,0.112328631146495,0,0.16072558669708,0.855038231223746,0.59675003159727,0.547992461293902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.75227465255847,0.670700859703636,0,0,0,1.01392563272577,0,0,0.189069634328136,0,0,0.851363990735132,0,0,0.324547393654683,0.522389211897802,0.531831842075461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367663080345869,0,0,0,0,0,0,0.183201743930407,0,0,0,0.993943903390637,0,0.132409180813219,7.45775213946916,0.709336764396714,0,0,0,4.97937656639626,0,0,0,0,0.234321431833797,0.624320153660641,0.570471821544449,1.19558944441441,0,0,0,0.408308342509787,0.122834317311768,2.37649296704261,0,1.7308685049499,0.910161361938026,0,0,0,0,0,0,3.60571341375832,0,0.179389635688862,1.06778694409284,3.17897851739343,0.300091096084402,0.515262646192195,1.28820270022815,1.8611685633159,0,0,1.7670364197088,1.74894807420369,0.646584227275248,0,0.201504196455281,0.169560592310488,0,0,0,0.243947412259191,0.132529768321485,1.04574548582567,0.621966330092223,1.00928340350251,1.09493207722749,0,0,0,3.71494342425583,2.88751792667834,0,0,0,0,0,0,0,0,0,0,0,1.2347220339942,5.88034845542168,6.33775174109154,4.91413608338813,7.08947888017685,0,0.122988438543114,0.171567810298526,0,0,0,0,0,0,1.44331342025273,0,0.469634776943287,0,0,0,0,0,0.492434012174795,0.234004265139238,0,0,0.335964256397719,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,17.8828222925941,0,0.531876233169741,0,0.514414748524284,0,0,0.142977993658148,1.08524321078289,0,0,0.355391948742546,0,1.20575750823834,0,0.299918973546171,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,1.00034104211935,0.813795071099207,1.03985430765404,0,0,0,7.82459859292069,29.562975527278,2.0694614258501,0.664225598535437,0.184369168541703,1.39013783148933,0.587403472388222,0.686286847621712,0,0,0.213455115606889,0,0,0,0.744323423456331,0.920771839728375,1.12264037773229,3.45975702990393,0,0.965123526861645,5.93672265779964,0.154209693802656,2.84098760501003,1.23190734020714,1.55776328755086,1.04589340613963,0,0,0,2.06666006696292,0.546273504020151,1.18011973463482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.88514832613622,0,0,0,0,9.64103579064957,1.25671933779759,1.23238893691716,0.767518373630648,0,1.28904293841928,2.75531718437034,0.511359764496605,4.5406338179836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02359116524534,1.71175595213568,14.3191461566672,0,0.179872457583315,0.274537029736055,0.117812402345686,0.202182481573316,0,0,0,0.243713489631284,0,1.36499911407986,3.11091950298168,9.04064932961942,0,0,0,1.73632660280006,0.655894752046633,0,0.30982349809975,0,0,0,0,0,3.16661452946496,20.086988470554,0.379473173765715,1.39973888097993,0,0,0,2.63602642174982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0,0,0,0,0.796991953004279,0.276283915531148,0,0,0,0,0,0,0,0.493217028184668,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,1.31631238292384,0,0.278847488557207,1.07730361905316,0.455768223388005,0,0,0,0,0,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0.134802265961354,0,0.234264445725339,0,0,0,0.394584402849391,0,0,7.26645665727612,0,0,0,0,0,0,0,0,0,0,0,1.04836000945218,0,0,0,0,0.290967049465258,0,1.35588444468319,0,0,0.189932387867636,0,0,0.213452994739353,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0.273810757783986,0,0,0,0.558564802544508,0.458320848023367,1.43574604915363,0.399358000997982,1.71690419254628,0.446342914883745,0.268733889946905,0,0,0.315132729228895,0.329663433524666,0.0674035438541849,0.590564889088493,0,0,0.136203406111576,0.160753148465019,0,0,0,0,0.0607495566580247,0,1.10327990218877,0.262272940674991,0,0,0,0.714695326373367,0,0,13.0319904420891,3.45688596480507,3.26587360109409,0,0,0,0.113312091520126,5.71553711344522,1.32506888912221,0.129282956361551,0.13223260174269,0,0,1.17466153824464,2.51526888159466,3.72815149812476,1.9846640872478,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0.665574309221114,0.248385611765534,0,0,0,0,0,0,0,2.38807684618998,1.8697064787778,8.3220879225392,7.76552321627865,12.0752592841236,22.2452805399134,0.457680136793847,11.9472429772959,1.86524640699337,0.443565449968902,1.27437413730962,2.24901556081802,3.26052209440145,13.2705986509074,0.265841714557995,0,2.25386413495828,1.14241563650639,0,0.181848659202559,0.107410557042488,5.56840511854192,5.97143833047924,0,2.06037423109676,1.01024846629776,0,0,0.214441591374926,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,1.41070377476274,0,0.128458450192919,0,0.319267718114302,0,0.252071696221718,0.276629009856872,0,1.42769420259154,0,0,0,0,0,0,0.198916222116275,1.42899623863589,0,0,0,0,0,0.270150338473579,0.781078098613847,0,0.126831620387814,0,28.5094038765735,0.496211178389294,0.175871244359621,0,0.535701835878287,0.336283722218824,1.21393120847326,1.13831095675649,0.266107110487916,0,0,0.0679697329768317,0.131545547125698,0,0.333694205676207,0.78493092850514,0,0,0,0,0,1.71543706023975,0,0,0,1.60342272946051,0,0,0,20.220685864553,0.236664001461131,0,0.846774100381858,0,0,0,0,0,0,0,0.410651227424988,0,0,0,0,0,0.11294608203896,0,0,0.231522474323834,0,0,0,0,0.196308467114945,0,0.8453114551668,0,0.375935671919414,0.322289439867886,0,0,0,0,0.730336388246517,13.7618785021362,0,0,0.271965960763659,0,0,4.83593523616777,4.62175628631418,4.75889218336168,0,0.218531143927391,0,0.509944148709909,0.534434810531121,1.01084389488329,0.250707539292375,1.66713136080127,0.267964130156178,0.829169439458779,0,2.13233981900981,0,0.129177819672012,0.31037357147929,0,1.33659032384146,0.404234377916439,0.435433495793923,0,0.471464371102113,2.51027718874367,2.66128285236811,0,0,0,0,0,2.32258743947446,1.22068853494722,0.665756774185513,0.402547587182052,0 | ||
|short_description=p5@FAM20A | |short_description=p5@FAM20A | ||
}} | }} |
Latest revision as of 00:30, 17 September 2015
Short description: | p5@FAM20A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_FAM20A_5end |
Coexpression cluster: | C1790_parotid_salivary_Osteoblast_mesenchymal_Smooth_Synoviocyte_submaxillary |
Association with transcript: | -250bp_to_ENST00000226094, NM_001243746, NM_017565, uc002jho.2, uc010wqp.1_5end |
EntrezGene: | FAM20A |
HGNC: | 23015 |
UniProt: | Q96MK3B7Z4Y3Q8IYA5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal stem cell of adipose | 6.34e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
adipose tissue | 2.58e-10 | 14 |
left ovary | 5.23e-07 | 4 |