FFCP PHASE1:Hg19::chr12:123215761..123215801,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27198 | |EntrezGene=27198 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4532 | |HGNC=4532 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BXC0 | |UniProt=Q9BXC0 | ||
|association_with_transcript=-371bp_to_ENST00000356987,ENST00000436083,uc001ucw.1_5end | |association_with_transcript=-371bp_to_ENST00000356987,ENST00000436083,uc001ucw.1_5end | ||
|cluster_id=chr12:123215761..123215801,- | |||
|coexpression_cluster_id=C128 | |||
|description=CAGE_peak_3_at_HCAR1_5end | |description=CAGE_peak_3_at_HCAR1_5end | ||
|id=chr12:123215761..123215801,- | |id=chr12:123215761..123215801,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000039;5.60e-46;7!CL:0000586;5.60e-46;7!CL:1001319;2.82e-21;1!CL:1000600;2.82e-21;1!CL:0002591;6.31e-21;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,5.61e-46,7;CL:0000586,5.61e-46,7;CL:1001319,2.82e-21,1;CL:1000600,2.82e-21,1;CL:0002591,7.72e-21,1 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.27e-32;10!UBERON:0005564;2.27e-32;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3095;5.56e-15;22!DOID:2994;5.56e-15;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,5.57e-15,22;DOID:2994,5.57e-15,22 | |||
|ontology_enrichment_uberon=UBERON:0003135!5.48e-07!11;UBERON:0003886!7.40e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;2.60e-40;8!UBERON:0003135;1.76e-29;11!UBERON:0004645;2.82e-21;1!UBERON:0001256;2.82e-21;1!UBERON:0001259;2.82e-21;1!UBERON:0000365;8.14e-17;5!UBERON:0000991;1.13e-15;21!UBERON:0003101;5.56e-15;22!UBERON:0000079;5.56e-15;22!UBERON:0005910;3.48e-14;6!UBERON:0001255;2.47e-11;2!UBERON:0001556;2.47e-11;2!UBERON:0000341;3.70e-11;2!UBERON:0001905;3.70e-11;2!UBERON:0002757;3.70e-11;2!UBERON:0010134;3.70e-11;2!UBERON:0000078;3.70e-11;2!UBERON:0005408;3.70e-11;2!UBERON:0002012;3.70e-11;2!UBERON:0001899;3.70e-11;2!UBERON:0008886;3.70e-11;2!UBERON:0002323;4.29e-10;45!UBERON:0000486;1.47e-07;12!UBERON:0000922;2.78e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,2.60e-40,8;UBERON:0003135,1.76e-29,11;UBERON:0004645,2.82e-21,1;UBERON:0001256,2.82e-21,1;UBERON:0001259,2.82e-21,1;UBERON:0000365,6.94e-17,5;UBERON:0000991,1.13e-15,21;UBERON:0009196,1.13e-15,21;UBERON:0009117,1.13e-15,21;UBERON:0005564,1.13e-15,21;UBERON:0004176,5.57e-15,22;UBERON:0003101,5.57e-15,22;UBERON:0000079,5.57e-15,22;UBERON:0005910,3.04e-14,6;UBERON:0001255,2.47e-11,2;UBERON:0001556,2.47e-11,2;UBERON:0000341,3.35e-11,2;UBERON:0000078,4.09e-11,2;UBERON:0007497,4.09e-11,2;UBERON:0003643,4.09e-11,2;UBERON:0003504,4.09e-11,2;UBERON:0003469,4.09e-11,2;UBERON:0003496,4.09e-11,2;UBERON:0002012,4.09e-11,2;UBERON:0008886,4.09e-11,2;UBERON:0007303,4.09e-11,2;UBERON:0002061,4.09e-11,2;UBERON:0005432,4.09e-11,2;UBERON:0004363,4.09e-11,2;UBERON:0001905,4.52e-11,2;UBERON:0002757,4.52e-11,2;UBERON:0010134,4.52e-11,2;UBERON:0005408,4.52e-11,2;UBERON:0001899,4.52e-11,2;UBERON:0002323,4.88e-11,46;UBERON:0004458,2.28e-10,49;UBERON:0003886,2.04e-09,54;UBERON:0002553,2.41e-08,61;UBERON:0004145,7.76e-08,3;UBERON:0003133,4.81e-07,48 | |||
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| ||
|short_description=p3@HCAR1 | |short_description=p3@HCAR1 | ||
}} | }} |
Latest revision as of 00:30, 17 September 2015
Short description: | p3@HCAR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_HCAR1_5end |
Coexpression cluster: | C128_testicular_choriocarcinoma_H9_teratocarcinoma_pancreatic_iPS_HES3GFP |
Association with transcript: | -371bp_to_ENST00000356987, ENST00000436083, uc001ucw.1_5end |
EntrezGene: | HCAR1 |
HGNC: | 4532 |
UniProt: | Q9BXC0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 5.61e-46 | 7 |
germ cell | 5.61e-46 | 7 |
bladder cell | 2.82e-21 | 1 |
lower urinary tract cell | 2.82e-21 | 1 |
smooth muscle cell of the pulmonary artery | 7.72e-21 | 1 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 5.57e-15 | 22 |
germ cell cancer | 5.57e-15 | 22 |